Apostichopus japonicus (Japanese sea cucumber): 139966334
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Entry
139966334 CDS
T10891
Name
(RefSeq) double-stranded RNA-specific editase 1-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajj03041
]
139966334
Spliceosome [BR:
ajj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139966334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DUF7677
Motif
Other DBs
NCBI-GeneID:
139966334
NCBI-ProteinID:
XP_071825324
LinkDB
All DBs
Position
4:complement(7865718..7887503)
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AA seq
686 aa
AA seq
DB search
MDTQINTQSDIKREIQLQAEVIHLDPAASNNKENEGTVGLLDGQNGQSEGGVKRPLEEGG
ESETQMTSDIPPKKRKKKQKKLHGPRMPKNALMQLNELRPGLEFVLCGQTGPVHAPVFHM
SVEVNGKEFKGSGSTKKSAKSKAAEMALKSFIQFPNSSDAYFAMGKFVTADDFTADVSDP
QTGFSPFEGNAGDKLASPENSTPTEELRKPQPQNQTQHKNPLMMLNEMRPGLHYKLESEE
GQSHSKLFVMSVNVEGTDYKGQARNKKLAKARAAQAVLSAVYNIHPSFQPGYEPIPNSAE
PMQAHLELADHIHGLIFNKFNELTAHGNSQYSRRKVLAGIVMTVNGDYSKSQVISVTTGT
KCINGEYMSDQGLALNDCHAEILSRRCLMKFLYSQLKLHLGNRSDHSIFEQYEGGGGFRL
KDGYSFHLYISTSPCGDARIFSPHEKGPAEDNKNGLGDKHPNRKTRGQLRTKIESGEGTI
PVKSAPIIQTWDGVMEGERLLTMSCSDKILRWNILGIQGALLSHFIEPIYLSSIVLGSLY
HASHLLRAVHMRLVGIENVHPPFFLNKPLLSGISNTESRQPGKAPNFSVNWMLGEDGLEV
TNTTTGKNENGNPSRICKSSLYTHFKELYGQLPSIVPLSDEPIPTYQVAKEMVEDFVRLK
YEMMATLEKAGYGMWVKKPLEQDMFV
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggatactcagattaatacacagtctgacattaaaagagagattcaattgcaggcagaa
gtcattcacttggatcctgcagcctctaacaataaagaaaatgaaggcacagttgggctt
ttggatggtcagaatggtcagtcagaaggaggagtgaagagacctctggaggagggaggc
gaaagtgaaacgcaaatgaccagtgacataccgcctaaaaagaggaaaaagaagcaaaag
aaactccatggacctaggatgcctaagaatgcgttgatgcagttgaacgaactaagacca
ggcttagagtttgtcctttgcggtcagacaggtccagttcatgcgccagtctttcacatg
tctgtcgaggtcaatgggaaagaatttaaagggtcggggtcaaccaagaagtcggccaag
agcaaagcagcagagatggctctgaagtcattcatacagttcccaaattcttcggatgcg
tacttcgccatggggaagtttgttacggctgacgatttcacggcagatgtctccgacccg
cagaccggattcagtccgttcgaaggaaatgccggagacaaacttgccagcccggagaac
tctacgccgacagaggagctacggaaaccgcaaccgcagaaccagacacagcacaagaat
cctctgatgatgctaaatgaaatgaggccaggattgcattacaagttggaatcggaagaa
ggacagagccacagtaaactgtttgtgatgtcagtcaatgtggaaggaacagattacaaa
ggacaggctcgaaacaagaaactcgccaaagccagggctgctcaggccgttctgtctgcc
gtgtataatatccatcccagctttcagcccggctacgaaccaatccctaattctgcagaa
ccgatgcaagctcatctggagctggcagatcacattcacggtctgatatttaacaaattt
aacgaactcacggctcacggcaattctcagtattcgaggaggaaggtcctcgccggaatc
gtcatgaccgtgaacggtgactattcgaagtctcaagtgatcagtgtcaccacgggaaca
aagtgcattaacggcgagtacatgtcagaccaagggctggcactcaatgactgtcacgct
gaaatactatcccggaggtgcctgatgaagttcctctactcacaattaaaactccatctc
ggtaacagaagtgaccactctatctttgagcaatatgaaggtggtggtgggtttaggtta
aaggatgggtactctttccacttgtatattagcacctccccgtgtggagatgccaggata
ttctcccctcatgagaaaggaccggcagaagacaacaagaatgggttgggggacaagcac
cctaatcgtaagaccagaggacaactgaggacaaaaatcgagtctggagagggtaccatt
ccagtgaagtcggctccaatcatccaaacctgggatggagttatggaaggcgagagatta
ctgacaatgtcttgcagtgataaaatattaagatggaatatcttaggtatccagggtgcc
ttgctttctcacttcattgagcccatttatctaagcagtatcgtccttggttctctatat
cacgccagtcacctgttgagagccgtccatatgcgtctggtcggcatcgaaaatgtccat
cctccgtttttcctcaacaagccgctcctcagcggcatcagcaacaccgagagccgacag
ccgggcaaagcgcccaatttcagcgtcaactggatgctaggggaggatggactagaagtg
accaacaccacgaccggaaagaacgaaaatggcaacccatctcgcatctgcaagagctcc
ctctatacacacttcaaggagttgtacggtcagcttccaagcatcgtccccttgagcgac
gaaccgattcctacctaccaagtcgccaaggagatggtggaggactttgtccggctcaag
tatgagatgatggccactctggagaaggctggctacgggatgtgggtgaaaaagccgctg
gagcaggacatgttcgtgtga
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