KEGG   Apostichopus japonicus (Japanese sea cucumber): 139966405
Entry
139966405         CDS       T10891                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins A1 homolog isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ajj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139966405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ajj03019]
    139966405
   03041 Spliceosome [BR:ajj03041]
    139966405
Messenger RNA biogenesis [BR:ajj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     139966405
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     139966405
Spliceosome [BR:ajj03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    139966405
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 NCBP3
Other DBs
NCBI-GeneID: 139966405
NCBI-ProteinID: XP_071825456
LinkDB
Position
4:complement(10065028..10079478)
AA seq 381 aa
MDTNDESSDSERMRKLFLGGLSFSTTEDDIKEAFQHYGKIVDCVVIRDPTRRDDPTPSRS
RGFGFVTFQTAQETQAVLDARKREKIKMNGREIDIKRAMAREDSEKDPTVNEETMKIYIY
GIGSLREEDLKEYFSQHGEVKNVIIPKQSADRNKIRGFAFVEFTDYDIVDTLVAMKTHTI
GGVSLEVKKATPQTKGGRDRGGGMGDRMRGGFDGGFGGPTGFVPRGYGGGGGFGGAGAFG
GGCLPYGGGGNRGFAEDRYGGGGRNQRDNFGGGGGYNDGFGRQGGYDDSYNGGQAGYNRG
FSSNSGAGGGGYRGDGFGGGYAASGGYNDGYASQRSSFGPVRGGKRSSGVGGGGPYGASF
GSNNYNRYGGGGGGGGGGRRY
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggatacaaatgacgaatcgtctgactcagagaggatgagaaagttatttcttggtggc
ctcagtttttccacgactgaagatgatatcaaggaggcctttcaacattacggtaaaatt
gtggattgcgtagtcatcagagacccaaccagacgagatgacccaactccatctcgttct
agaggatttggttttgtcaccttccaaacagcacaggaaacacaggctgtgctggatgct
cgtaaaagggaaaagataaagatgaatggcagggagattgatattaaaagagcaatggct
agagaagattccgagaaggatccaacggttaacgaagagaccatgaaaatttacatctac
ggcatcggctcgttgagagaagaagacctaaaagaatactttagtcaacacggagaagtc
aaaaacgttatcattcccaaacagagcgccgatcggaataaaatacgtggatttgcattt
gttgaatttacagattacgatatcgtagatactctcgttgcaatgaagacccatactata
ggtggggtatcacttgaagtaaaaaaagcaactccccaaacaaaaggtggaagagatcgt
ggaggtggtatgggtgacagaatgagaggtgggtttgacggtggctttggtggacctaca
ggttttgttcctcgtggttacggcggaggtggtggctttggaggagccggtgcattcgga
gggggatgccttccctatggagggggtggtaaccgtggatttgcagaagacaggtatggt
ggtggtggcagaaatcaaagagacaattttggtggaggtggagggtataatgatgggttt
ggaagacaaggtggttatgatgacagttacaatgggggccaagctggctacaacagaggg
tttagtagtaatagcggagcaggaggaggaggatacaggggcgatggcttcggtggtgga
tatgctgcatctggagggtacaatgatggttatgctagtcaaaggtctagctttggacct
gtgagaggtggtaaaaggagctcaggagtgggtggaggtggtccctatggagcctctttt
ggaagtaacaactacaatcgttatggaggagggggtggaggaggaggaggaggcaggaga
tactaa

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