KEGG   Apostichopus japonicus (Japanese sea cucumber): 139966409
Entry
139966409         CDS       T10891                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like 2
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ajj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139966409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ajj03019]
    139966409
   03041 Spliceosome [BR:ajj03041]
    139966409
Messenger RNA biogenesis [BR:ajj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     139966409
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     139966409
Spliceosome [BR:ajj03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    139966409
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 139966409
NCBI-ProteinID: XP_071825469
LinkDB
Position
4:complement(10104141..10121959)
AA seq 321 aa
MSSNNGNTDMASSENLRKLFIGGMDRSSTDNDIKAALESYGNIVDCVVIKDSVTKQSRGF
GFVTFDTVEAADSVLQTRRESGPISIKEREVEIKRAIPRDDESGTGHLSVKKIFVGGIPN
ISGEAADGYIRKWCAPYKPTNVELLKKPDDDSKLRGFGFLEFEHEDFVDKLVILQGLFMN
GKKVEVKKAAPKDQMGSGGRGGRGRGRGRGGYDGGMGRGRHGGGGYNQGGGYDSYGGQGG
GSGYYGGGGGYGGGGGGGYDNYQDDGYGGGYGGDSYRRGGGGGYGGGGYSSYGGGDYGGD
GGFGYEQGGGRGYRGGRYKPY
NT seq 966 nt   +upstreamnt  +downstreamnt
atgtcatcgaacaacggtaacactgatatggcctcttctgagaatctcagaaaattgttc
ataggcggcatggaccgatcgtcaacagataatgatatcaaggcagcgttagaaagctat
ggtaatatcgtcgactgtgtcgtcatcaaggactctgtgacgaaacaatcacgtggattt
ggatttgtcacttttgatacagttgaagccgcagacagcgtgctgcaaacacgaagggaa
agcggccccatttcgataaaagaacgagaagtggaaatcaagagggccattccacgggat
gacgaaagcggaacgggacatttgtcagtgaagaagatatttgtcggtgggattccaaat
attagcggagaagcagcagatggctacattcgtaaatggtgtgccccgtacaaaccaacg
aacgtggaactcttaaaaaagccagacgatgacagcaaattacgtggctttgggttttta
gaattcgaacacgaagactttgtggacaaattagtcattctgcaaggactctttatgaac
ggaaagaaagtggaagtgaagaaagcagcaccaaaggatcaaatgggatccggtggtcga
ggcggtcgtggtcgtggtcgcggcagaggtggctatgatggaggaatggggagaggtcga
catggtggtggtggctacaatcaaggaggagggtatgacagctatggtggtcaaggagga
ggatctggctattatggaggtggaggaggttatggaggtggaggaggaggaggatatgat
aattatcaagatgatggatatggtggcggttatggaggtgatagttacagacgaggaggc
ggtggtggctatggtggtggcggatatagcagttacggaggcggtgattatggtggcgat
ggcggtttcggctacgaacagggaggtggcaggggttaccgtggtggcagatacaagcca
tactag

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