Apostichopus japonicus (Japanese sea cucumber): 139966445
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Entry
139966445 CDS
T10891
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00450
Selenocompound metabolism
ajj00970
Aminoacyl-tRNA biosynthesis
ajj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
139966445
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139966445
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ajj01007
]
139966445
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ajj03016
]
139966445
Enzymes [BR:
ajj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
139966445
Amino acid related enzymes [BR:
ajj01007
]
Aminoacyl-tRNA synthetase
Class I (U)
139966445
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
139966445
Prokaryotic type
Other AARSs
139966445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
GST_C
GST_C_3
tRNA-synt_1
GST_C_2
Arc1p_N_like
GST_C_6
GST_N
tRNA-synt_1e
Anticodon_1
HTH_23
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
139966445
NCBI-ProteinID:
XP_071825552
LinkDB
All DBs
Position
4:11416769..11434931
Genome browser
AA seq
920 aa
AA seq
DB search
MKLFTDKGNQHSLKILVAAELAGISLEIEHVDSAAIVVPFLKRNVLPVLEVETNEYLFSA
NAITRYILATVGKDSEDITVSTWLEWESTDLQAALSSYLPALYGGGKADSQKLQPHLSKL
DNSLGGAQFIVQDQLSAADVCLFAALYPLYANNKSCFENFSNLNAWFTKLHAEPPFGASV
AKVTEGKGSSSLKASILAQPLVNTLPVARSVSNEKGKSSKDKENSTTEEVVAKEFSLEEV
RAAKETFLTGKKVAPKPVQRNHPLLPRKDAKNVLITSALPYVNNIPHLGNIVGCVLSADV
FSRFCRIRNYNVLYICGTDEYGTATETKALEEGLTPQQICDKYFKLHDHVYRWFNIDCDH
FGRTTTPQQTKIAQDIFWGLHKEQHLLEQKVEQLKCEDCDRFLADRFVEGTCPLCNYDDA
RGDQCDKCGKLINATDLKNPRCKICNRTPVIKSSDHLFLDLPRLESRLQSFLDKSTTEGD
WTSNAKMITSSWIRDGLKPRCITRDLKWGTPVPLEPYTDKVFYVWFDAPIGYPSITANYT
PDWEKWWKNPDEVQLYQFMAKDNVPFHSVVFPCSLLGCGEKWTLVNHLIATEYLNYEDSK
FSKSRGVGVFGNHAEQTGIPADIWRFYLLFIRPESQDSYFNWDDFVLKNNSELLNNLGNF
INRGLMFLEKNFGGLVQELKLEQLDCQLLAAVSQELKQYVSLLEKVRIKEALRHVLNISR
LGNQHIQVTQPWVLVKGSPEEKSRAGTVTSLCVNISCLLSVMLHPYMPDTSKTIQEQLNA
SADVNVLTGDFVCYLEPGHKIGTPKPLFAKIEQAQADQLRNQYAGKNDSTPAPSEPSKPT
PEKSAPAPKDVDPAEVERLTQEVAKQGDEVRKLKTDKAEKSQIDLEVAKLLALKKELALA
LGVKPEAGKKGGKSKKGKKK
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctttacagataaagggaatcaacattctctaaagattttagttgccgcagaa
ctagccggaatcagtctggagattgaacatgtggatagcgcagccatagttgtgcctttt
ctgaagagaaatgttttaccagtactagaggttgagacaaatgaatatctgttttctgcc
aatgctattacaagatacatacttgctactgtggggaaagactctgaagatatcacagtg
tccacctggcttgaatgggaatctacagacttacaggcagcactatcatcttaccttcct
gctttgtatggtggaggcaaagcggattctcagaaattacagcctcatttatcaaaacta
gacaatagtcttggtggagcccaattcattgtccaggaccaactatcagctgccgatgtt
tgcctttttgctgccctctatccgctgtatgccaacaataaatcatgctttgaaaatttt
tcaaatctgaatgcctggtttaccaaacttcatgctgaaccaccatttggagcttctgtt
gccaaggtgacagaaggaaaaggcagcagttcactgaaagcctccatccttgctcaacca
ttggtcaacactcttccagtagcgaggagtgtgtctaatgagaaaggaaagtcatcaaaa
gataaagaaaattcaacgacagaggaggtagttgctaaggaattttctttggaagaagtc
agagctgctaaggaaacttttctaacaggaaagaaggttgctcccaaaccagtccaaagg
aatcatccactactacccaggaaagatgctaagaatgttctaataaccagcgctctgcca
tatgtcaacaatattcctcatctcggaaatatagttggctgtgttctgagtgccgatgtc
ttctccaggttctgcaggattcgtaactacaatgtcctatacatctgtggtactgacgaa
tatggtactgcgacagagaccaaagccctggaagaaggcctgactcctcaacagatatgt
gacaagtacttcaaactacacgaccatgtgtacaggtggttcaacatcgactgtgaccac
tttggccgaactaccacgccgcaacaaacaaaaattgctcaagacattttctggggactt
cacaaagagcagcacttactagagcagaaggtcgaacagctgaaatgtgaagattgtgac
cgattcttggcagacagattcgtggaggggacgtgtcccttgtgtaactatgacgatgca
agaggtgatcaatgcgataaatgtgggaagctcattaatgcaacagatctcaagaaccct
cgttgtaagatctgcaacagaactccagtaatcaaaagttccgatcatcttttcttggac
cttccgagactggagtccagacttcagtcattcctggacaagtccacaacagagggagac
tggacctccaatgccaagatgatcacatcgtcctggatacgagacggccttaaaccaagg
tgcatcaccagggatctaaaatggggaactcccgtacctctggagccctacacggacaag
gtgttctatgtatggtttgatgcacccatcggttacccttccattactgccaactacacc
cctgattgggagaaatggtggaagaacccagatgaggttcagctataccagtttatggcc
aaagataatgtaccattccacagtgtggtattcccctgttcacttctaggctgcggagag
aagtggacgttggtgaaccatctgatcgctacagagtacctcaactatgaggactccaag
ttttccaagagcagaggggttggtgtatttggcaatcatgctgagcagacaggaataccg
gcagacatttggcggttctatcttctcttcatacgacctgaatctcaggatagctacttc
aactgggatgactttgttcttaaaaacaacagtgaacttcttaacaacctcggaaacttt
attaacaggggtctcatgttcttggagaagaactttggaggacttgttcaagagttgaag
ctggaacagttggattgccagcttttagctgcagtgagtcaggaactgaagcaatatgtc
agtctccttgagaaagtcaggattaaagaagccttgagacatgtgctaaacatctcacgg
cttggtaaccaacacattcaagtcacacagccctgggtccttgtcaaaggatcgccagaa
gaaaagtccagagccgggacggttacttctctctgtgttaacatctcctgcctcttgtcc
gtcatgcttcatccgtacatgccagacacgagtaaaaccatccaggagcagctcaatgcc
tcagccgatgttaacgtcctcactggagactttgtttgttacctcgaaccaggacacaaa
attggaacgccaaaacctctgtttgctaagattgaacaagctcaggcagaccaattgaga
aaccaatatgcagggaagaacgacagcacaccagctcctagtgagccttcaaagccaaca
ccagagaagtcagcccctgctcctaaggatgttgaccctgctgaggtggaaaggctcaca
caggaagtagcgaaacagggagatgaagttcgtaagttgaagacggacaaagccgagaaa
tcacagatcgatctcgaagtagccaagctattggctttgaagaaagagctggctctggcc
ttgggggtcaaaccagaggcgggaaagaagggaggaaagagtaagaaaggaaagaaaaag
taa
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