Apostichopus japonicus (Japanese sea cucumber): 139966526
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Entry
139966526 CDS
T10891
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139966526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajj03041
]
139966526
Spliceosome [BR:
ajj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
139966526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
HEAT_2
Motif
Other DBs
NCBI-GeneID:
139966526
NCBI-ProteinID:
XP_071825750
LinkDB
All DBs
Position
4:complement(13969281..13985726)
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AA seq
670 aa
AA seq
DB search
MSLSKRDLEDLKPAVDETLRHVLGFSDSAVVTAALNCVAKGMSKSKAIDMLTPLLEESAP
RFVESLFATISQKQAALKTKKRSAVKDEDPGRPKRKRLSHFTDDEEDEKYVPAMDDAGQL
SSSQIKNMMEAARQQIIAGRTQRSGLPSGRKVPTTPAAPAQHIPTVSETQALVNDAMQKV
QRAAEIQARIKASMESTGLNKQAAPQPVQSEEPPQPKEEDGKPVVLAVPTGPTDLILDEY
GRTVDARGRVIQLPKFVPTIKANIRAKRREEFKATQQEKPQDINPNSSKFFDARLTGNQE
QRARKTFKFFEQGRFERIAQRIRAKSQLEKLQNEIAQVAKKTGITSATKLALITPKKELS
GTETPTVEWWDSVILQSDSYDDIQEGAHGSDRKSEDKFTGITYLVEHPIQMQPPAEPTKP
VEIPIYLTKKEQKKLRRQRRRETQREQSEKIRLGLEPPPEPKVRMANLMRVLGTEAVQDP
TKVEAHVRAQMEKRQKTHEEANAARKLTDAQRKEKKMRKIKEDTSLGVNVALYRVKDFRN
PAKKFKVEANCKQLHMTGAVVLHKDVNVVVVEGGPKQQKKFQRLMLHRIKWNDDKKKNDD
DDDNSDDEGESRSKKCQLVWEGMTKERHFGEIRFKQCPTETIAREFFKKHNVEHYWALCH
SQAILENTDM
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttcaaagagagatttagaggacttgaagccagcagttgatgaaaccttacga
catgtgttgggattctcagactctgctgtggttaccgctgctctcaattgtgtggccaaa
ggaatgagtaaaagtaaagcaattgatatgctgactccattgttggaagaatcagcacca
agatttgtggagtccctgtttgctacgatcagccaaaaacaagccgcactgaaaactaag
aagcgatcagctgtgaaggatgaagacccaggaagaccaaagaggaagagattgtctcac
ttcacagatgatgaagaagatgaaaagtatgttcctgcaatggatgatgcgggccagctg
tcatcctcccagatcaagaacatgatggaggcagcccgtcaacagatcatagctggaaga
acacagcgcagtggattgccttcaggtaggaaggtccccacaactcctgctgcaccagcc
caacacatccctactgtctctgaaacccaagcccttgtgaacgatgccatgcagaaggta
caaagagccgcagagatacaggcccgtatcaaggcctctatggagagcactggacttaac
aagcaagcagctccccagcctgtacagtctgaagagcctccccagcccaaggaagaagat
gggaagcctgtggttttggctgtaccaactggtcccactgacttgatccttgatgaatat
ggccgcacagtggatgcacgaggcagagttattcaacttccaaagtttgttccaacaatt
aaggcaaacatcagagcaaagagaagggaggaattcaaagccacacagcaagagaaacca
caggatataaatcccaattcttccaaattttttgacgcacggctcactggtaatcaagaa
cagagagcaagaaaaacattcaagttctttgagcaaggcagatttgaaagaatagcccag
agaatccgagcaaaatctcagttagagaaactgcaaaacgagatagctcaggtagccaag
aaaaccggaattacctcagcaacgaaactggccctgatcacaccaaagaaagagttgagt
ggtacagaaacaccgactgtggagtggtgggattcagtcatactgcagtcagattcctac
gatgatatccaagagggagcacatggctcggacagaaaatctgaagacaagtttaccggg
ataacatacctggttgaacatcctatacaaatgcaacctccagctgaaccaaccaaaccg
gtcgaaattcctatctacttgacaaagaaagaacagaagaaactacgcaggcagagaagg
agggaaactcaacgtgagcagtctgagaaaatcagattgggtcttgaacctccacctgaa
cctaaagtccgtatggccaacctcatgagagtcttaggaacagaggccgtccaggatcca
accaaagtggaagcccacgtcagggcacagatggagaagaggcagaaaactcacgaagag
gcaaatgcagctcgcaagttgacagatgctcagaggaaagagaagaaaatgagaaaaatc
aaagaagacaccagcttaggagtcaacgtcgccctctatagagtaaaggacttccgcaac
ccggcaaagaaatttaaagttgaagccaactgtaaacagctgcatatgactggagcagtg
gtactacataaggatgtcaacgttgtggtagttgaaggaggtcccaagcaacaaaagaag
tttcagcgtttgatgctgcacaggattaaatggaatgacgataagaagaaaaatgatgac
gacgatgacaattctgatgatgaaggagagagtaggagcaaaaagtgccagttggtttgg
gagggaatgacgaaagaaagacactttggtgaaatacggttcaagcaatgtccgacagaa
accattgccagagagttcttcaagaagcataatgtagaacattactgggctctctgccac
agccaggcaatcttagagaatactgacatgtga
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