Apostichopus japonicus (Japanese sea cucumber): 139966870
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Entry
139966870 CDS
T10891
Name
(RefSeq) unconventional myosin-Va-like isoform X1
KO
K10357
myosin V
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139966870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139966870
04131 Membrane trafficking [BR:
ajj04131
]
139966870
03029 Mitochondrial biogenesis [BR:
ajj03029
]
139966870
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ajj04812
]
139966870
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
139966870
mRNA cycle factors
P-body specific factors
139966870
Membrane trafficking [BR:
ajj04131
]
Others
Actin-binding proteins
Myosins
139966870
Mitochondrial biogenesis [BR:
ajj03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
139966870
Cytoskeleton proteins [BR:
ajj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139966870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
139966870
NCBI-ProteinID:
XP_071826410
LinkDB
All DBs
Position
4:23939512..24045337
Genome browser
AA seq
1908 aa
AA seq
DB search
MSVDWVGRPFNYTPNDSKLYVKGARVWIRDPEVVWKPGTLAANYKGGDKTISVLLELEDE
TEEEISLKLKSEEDLPPLRNPEILIGENDLTSLSYLHEPAVLFNLHERFIRSNAIYTYCG
IVLVALNPYEQLPLYSEDVIRAYSGQDMGSMDPHIFAVAEEAFKKLARFDENQSIIVSGE
SGAGKTVSAKYAMRYFATVGGSSAETQVEKKVLASNPIMESIGNAKTTRNDNSSRFGKYI
EISFNRQHNILGANMRTYLLEKSRVVYQAQDERNYHIFYQLCAAADQPEMAHLKLGHPDE
FTYTSQGDSPTVDTIDDAKQFEETKDALNLLGIDEKTQMVIFQIMSAVLHFGNVDIRPGD
RESSKIERDNENLPILCELLGIDLVQMRQWLCCRKIVTVREVLTKPLRHDTAVFSRDALA
KHIYSQLFSWIVTQINKAMAPTMKQKGFIGVLDIYGFEMFDFNSFEQFCINYANEKLQQQ
FTQHVFKLEQEEYLKEKIEWSFIDFYDNQPCIDLIENKLGILDLLDEECMLPKGADDNWC
QKLYAKHLEKKHFSKPRTSNTSFVIHHFADKVEYQSEGCVEKNRDNVNDEHIKILRGSQF
EFVANLFRDADAPKIDKRKAPVRSLPAPVKGNKSFKKSVGSQFRDSLGYLMQKLNSTTPH
YVRCIKPNDLKQPFTFESKRAVEQLRACGVLETIRISAAGYPSRWTYTEFFTRYRVLMQK
NHINKNNIRGSSEKTLHALIPDPDKYQFGKTKIFFRAGQVAYMEKLRADKLHAACVLMQK
TVRGWVQWKKYQRTRKAIILLQKYTRGFLARKLTKFLRATKAAICIQKAWRRYKARKAYL
RIRNSVLTIQSYYRGLVGRRHFQEELQLQKALIIQKYFRGWNAKARYHRTRRSIILLQCC
VRRMRAKKELKQLKIEARSVEHFKTLNVGMENKIVSLQQKVDLLNKQQIQHQQDQAVIIN
LKADLQEYDKLKHSLETNSNKVVSLEDELTKLRRELAEALKDKATLEEELAKERNAKEEA
VQLLQEESSKLAGDLKERENQLKELEEDIEARIVSERETTEKRLLADIIQERAQHQKLLQ
DYNRLEQRHENIKEDMLALQNTSITRAKMNNLNESVTENVSGFNPEFEYNGHRPVAAPRH
SRNDSNEGSESGYGTLPKSDNENIDSENEEQGDLRSGIDMGLLIKLQQKVRDLEKEKKHL
QLNLDKREMDGRTKVDIMENELGNVSLEMKSLKETNDRHKRDLHDLHQSLSAGKSDDHPM
KILTQQVSVLGEENEKHRQEIVRLKTNLTNSQRRWDLQLRKILEDSDTNDASTNTDKDLL
MSDDELTSVHGNGDLTVAYKSLKMTNHLFSALSASQSSLKDTVEKYGDLTESHSDMIVDK
LTPEPSDIQLLREKNGILEKEILAVKKNHEHEKQELKGQINELKKDNGRQQNIIGKNLKV
TPEAKMNQALQEEITRMTNENMDYAEQNEYLEKQVRKLKKQLKAAHKRLTVLAAGDTSIL
SGVASENRDKPTQSEVPSSMDAQVKSKSRNEVMGMIEYKPEDEQRLVKAVIIDLQPKNID
DRVLPGLPAYLLFMSIRFADYINDDVKVKSLLSAVVNSVKKTVKKHFEDVEYVSFWLTNT
IRLLHNLKQYSGEENFSSQNNKIQNNHCLRNFDLSEYRLVMNDLGVHIYQMLVRIIENKL
QPMILPAMLESDMAGLAPTKSRSDGESRNISIDSLIKQLSTHLTTMNRHGMDPEVIRQII
KQSFYLITASTINNILLRKDMCHWSKGVQIRYNLSEMEEWLRSHRLYDRNMEHTLEPLVQ
VAQLLQVKKRTDDDVKLICDTCSELTTTQIVKILHLYTPDEYEKRTEVAFIRKVSAKLAG
RGEMKKEAQLLIDAKHTFPVTFPYNPTSINLNEIDIPESFGLNFVKKI
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtagactgggtcggacgtccgtttaattacactcccaacgattcgaaactctac
gtcaagggggcgagagtatggatccgggatccagaggtagtttggaagccgggcacgctt
gcagcaaactacaaaggaggtgataagaccatctccgtccttctagagctagaagatgaa
acagaagaggaaatctctctgaaattgaagtctgaggaagatttgccaccattgaggaat
cccgagatactgatcggtgaaaatgacctcacttcgcttagttacctccacgaaccagca
gtactcttcaacctgcatgaaagattcattcgtagcaatgccatatatacatactgtggt
attgttttagtagctctgaatccatacgagcagttacctctctacagtgaagatgttatc
agggcatacagtgggcaggacatggggtccatggatcctcatatatttgccgtcgcggag
gaggctttcaagaaacttgctaggtttgatgaaaaccagtccatcatcgttagtggagag
agtggagcagggaagacagtctcagctaaatatgccatgagatacttcgccacggtcgga
ggttcaagcgctgaaacgcaagtggagaagaaggtcttagcttctaacccgattatggag
tcaatcggaaacgccaaaacgaccagaaacgacaacagcagtcgtttcgggaagtacata
gagatcagtttcaacaggcagcataatatactcggagcaaacatgaggacgtatctcctg
gagaagtcaagggtcgtctaccaggcccaggacgaaagaaactaccacattttttaccaa
ctgtgtgctgctgcagaccaaccagaaatggcacatttgaaactaggccatccagatgaa
ttcacttacacaagtcaaggggacagtccgacggtggacacaatcgatgatgcaaaacaa
tttgaagaaactaaagatgccttaaatctcctaggtatcgacgagaagacgcagatggtt
atcttccagatcatgtctgccgtgctacattttgggaatgtggatatcaggccgggggac
agagagagcagtaaaatagagagggacaatgagaacttaccgatcctgtgtgaacttctt
ggaatcgacctggttcaaatgagacagtggctgtgctgtagaaagatcgtcaccgtacga
gaagtcctcaccaaaccacttcgtcatgacaccgctgttttttcaagggacgcgcttgct
aagcatatctactcccaactgttctcttggatcgtgactcagattaacaaggctatggcc
ccaaccatgaaacagaaaggattcatcggtgttttagatatttatggatttgagatgttt
gactttaacagctttgagcagttttgtatcaattatgccaatgagaaactacagcagcag
tttacacagcacgttttcaagttagagcaggaagaatatctgaaggagaagattgaatgg
tctttcatagatttctacgataaccagccgtgtatagacctcatcgagaataaacttggc
atattggatctcctagatgaagagtgtatgctgcctaaaggtgcagacgataactggtgt
cagaaactttacgctaaacatttggagaagaagcacttctcaaagcccaggacgtcaaac
acgtcgtttgtgatccatcattttgcggacaaagtggagtaccaatcagagggctgtgtt
gagaagaatagagacaacgtgaatgatgagcatatcaaaatactcagaggaagccagttt
gaattcgttgccaatctgtttcgagatgccgacgccccaaagatagacaagaggaaagcg
ccagtcaggtctttacccgcaccggtaaagggaaacaaaagcttcaagaaatctgtcgga
agtcagttccgggactctttaggatacctgatgcaaaagctgaactcgacgactcctcac
tacgttcgctgcatcaaaccaaatgacttgaaacagccattcacttttgaatctaaaaga
gcggttgagcagcttcgagcctgcggtgttttagaaacgattcgtatcagtgcagctgga
tatccgtcaagatggacctatacagaattcttcacccggtatcgagtattgatgcaaaag
aaccacataaacaagaacaatatcagaggatccagcgagaaaactctccatgcactcatc
ccagatcccgacaagtaccagttcggtaagaccaagatctttttccgagccgggcaagtg
gcctacatggagaaactgagggcggataaactccacgcagcgtgcgtgttgatgcagaag
acggtccgtgggtgggtgcagtggaagaagtatcaacggacaagaaaagcgatcatttta
ctgcagaaatacaccagaggattcttggctagaaagctgacgaaattcttgcgagctacg
aaggctgctatatgtatacagaaggcatggcgacgctacaaagcccgcaaggcctacctg
agaatcaggaactcagtcctaaccatccagtcgtactacagagggctggttggaagaaga
catttccaagaagagttgcagttacagaaggccttaatcattcaaaagtacttccgagga
tggaacgctaaggcgaggtatcatcgaacccgtaggtcgataattctcctccagtgttgc
gtgagaaggatgagagccaagaaggaactaaagcaactcaagattgaggctcgctcagtg
gaacactttaagacgctcaatgtcggaatggaaaacaagattgtgtccttacagcagaag
gttgatttattgaataaacaacaaatccaacatcaacaggaccaagcggtgatcataaac
ctgaaggccgaccttcaagaatacgacaaacttaagcattcgttggagacgaacagcaac
aaggtagtaagcttggaggatgaactgacgaagctgaggagagagttagcggaagctctg
aaggacaaagctaccctggaagaggagcttgccaaagaaaggaatgccaaagaagaggct
gttcagctgctacaagaagaaagttctaagctggcaggagacttgaaggagagggagaac
caattgaaggaattagaggaagacattgaagcacggattgtatcagaaagagaaactaca
gagaagaggttactggcagatatcattcaagaacgtgctcagcatcagaagctgttacag
gattataacagactagagcaaagacatgaaaacatcaaagaagacatgctagcactgcag
aatacaagtattactcgtgccaaaatgaacaatttaaatgaatcagttacagaaaatgta
tctggtttcaatcctgaatttgagtataacggtcacagaccagtggctgctcctcgtcat
tcccgcaatgacagcaacgaagggtccgaatcaggatacggcactttaccaaagtcagat
aacgagaatatcgactcggaaaatgaggaacaaggtgatttgaggagcggtattgatatg
ggcctgctcatcaaacttcagcagaaagtcagagatttggagaaagagaagaaacatcta
cagttgaatctagacaagagggagatggacggaaggacaaaagtagacattatggagaac
gaattgggaaacgtcagtttggagatgaaatctttgaaagaaaccaacgacaggcacaaa
agagatcttcacgatctgcatcagtcgttgtcggccggcaaatcagacgaccaccccatg
aaaatactgacgcagcaagtcagtgtcttgggagaagagaacgagaaacatcggcaagag
attgtccggcttaagacaaatctgaccaacagccaaaggagatgggaccttcagttgagg
aagatattggaggacagcgatacgaacgatgcatcgactaacacagacaaagatcttctc
atgtccgatgacgagctgacatctgtccacggcaatggtgatctgacggtggcctacaaa
tcccttaagatgaccaaccatctattttcagcactttcagccagtcaaagtagcttaaaa
gacactgttgaaaaatacggtgatctcacggaaagccatagtgatatgatcgttgataag
ctgacaccagagcctagcgacatacagttgctaagagagaagaacggaattcttgagaaa
gaaattttagccgtcaagaagaaccacgagcatgaaaagcaggagctgaaaggacagata
aacgaactgaagaaagacaatggaagacaacaaaatattattggaaagaacttgaaagtg
acgccagaagctaaaatgaaccaagctctccaggaggaaattaccagaatgaccaatgaa
aatatggactacgctgaacaaaatgaatacttggaaaagcaagtcagaaaactgaagaaa
cagctcaaagcagcacacaagaggctgacggttctagccgcaggagacactagtattttg
tctggagttgcatcagaaaacagagacaaaccgactcagtctgaagtgccatcatccatg
gatgctcaggtgaagagtaaatccagaaatgaagtcatgggtatgatagaatacaaacca
gaagatgaacagagattagtgaaagctgtcattatagacttacaacctaagaatatagat
gatcgggtgcttcctgggcttcctgcgtaccttctcttcatgtcaatacggtttgctgat
tacatcaacgatgacgtcaaagtcaagtctctcctctcggcggtcgtcaacagcgtaaag
aaaactgtgaagaaacattttgaagatgttgaatatgtgtccttttggctgacaaacact
ataaggttattacacaaccttaagcagtatagcggagaggagaatttttcatcacagaac
aacaagatacagaacaaccactgtttacgaaactttgatttatccgagtacagactagta
atgaatgacctcggtgtgcacatctaccagatgctggtcagaatcattgagaacaaacta
caaccaatgatcttgcctgccatgctagaaagcgacatggctggactagcaccaaccaag
tcaagatcggatggagaatctcgcaatatatccatagattctttgatcaagcagctgtcg
acccatttaacgaccatgaacaggcacggtatggatccagaggttatccgacaaatcatc
aagcagagtttttatctcatcacagctagtactattaacaacattctgttgaggaaggac
atgtgtcattggtccaaaggagtacagataaggtacaacctgagtgaaatggaggagtgg
ttacgtagtcacaggttgtacgaccgaaacatggagcacacgctagaaccattggtacag
gtcgcacagctacttcaggtcaaaaagagaacggacgacgatgttaaactgatctgtgat
acttgttctgagttaacaacaacacagattgtgaaaattcttcatctctacaccccggac
gagtacgagaagcggacggaggttgcgttcatccgaaaggtcagtgctaagctggcgggt
cgtggggagatgaagaaggaagcccagttactaatcgacgccaagcacacattcccggtt
accttcccttacaatcccacgtctatcaacttgaacgagatcgacataccagagtctttc
gggctgaactttgtgaagaagatatga
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integrated database retrieval system
