Apostichopus japonicus (Japanese sea cucumber): 139967307
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Entry
139967307 CDS
T10891
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ajj04147
]
139967307
04090 CD molecules [BR:
ajj04090
]
139967307
Exosome [BR:
ajj04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139967307
CD molecules [BR:
ajj04090
]
Proteins
139967307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
DELLA
Baculo_PEP_C
ATG17_like
V-SNARE_C
AIP3
Phage_holin_3_6
Hydro_N_hd
Motif
Other DBs
NCBI-GeneID:
139967307
NCBI-ProteinID:
XP_071827069
LinkDB
All DBs
Position
5:complement(3017081..3040738)
Genome browser
AA seq
860 aa
AA seq
DB search
MINCFKRCVWTTTVFSFFVIASLLSSCRANEDHHDKQDFNWLSDASQYNLVNNTIDNDWR
YNFLVETGEYLVRLLVPESFPWGDTVTSLMSDGADMDTLLQELIMFELPLLIISGILMLL
AICLPIVGICFCLCRCCGNCGGTRKDEEISSLNRCPVYVMSVILTVICILIGICTFLDKP
VQSKLVESSFDLGYTVLYTAYDIETFSDNIVKDLNQLAYDDFDGFTDEIMDRLDGADEEI
SDPLLRETYSHLDAIADHLDNFLNELELFTLENNTFGEINETINRILTGSEDLEIALDNV
AANLTDIKTDCLADPIRAGLGVCDSLPDPNELEVSLDLTQLTSISDRLDPLLIFDSTNST
ITVVFDLLNEINQSLSAVPEVIQNQTKEFQSTVNSTLLSIGRSIKTSVDESVEILESFDV
QEMMQTEMIENELWKAELDSYMNYEFILRAALGGFLLVLLSLAGLCFGCVGYDSNKPPSQ
QSGITNCGGKMSMCAAVWAFLIAFIICFGAAILFLVGSNLTLVCDDLQDLTIIEEVVDNP
ALWNGEHPLASISGNANMTFYSLLEQCGEDDTIAGILGLTDMLDTDSLDIRGEIPDLDEL
AHSINQSFGEMGFSNVDISSQIQRLNGQFLPANVTEQISTIKNATAFIDVKSIANDLDSQ
AAAVRSSYPDMASSLEGLATKLRNIQDEIVEGIANDTVLLQDQLSDMNSSINTLMGETSP
ILTSVDDIMEFVQIDALLLVVETLETFIDDIVTVAENFTNESIERVKNDIGRCGIVRLIY
DSLVNGFCDGFMAAITLYWMSVSVFSLCLLPFICFNVRIAKYHRRAQPSNVQHPQYLPPP
GSIKVYPPVAIYQTLPAHKI
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgattaactgcttcaaaagatgcgtatggacgacaacggtcttctctttcttcgtgatc
gcgtctttactttcatcgtgtcgagctaacgaagatcaccatgataagcaggatttcaac
tggctctctgacgcctcccagtataacctggttaacaataccatcgacaatgattggcgg
tataacttcttggtggagactggtgaatatctggtcagattactagtcccagagtcgttc
ccttggggagataccgtaacaagtttaatgtccgatggagccgatatggatactctctta
caggagttaataatgttcgagctgccattgcttatcatttccgggattctgatgctccta
gcgatctgtcttccaatcgttgggatctgtttctgtctctgccgttgctgtggtaactgc
ggaggaacacgcaaagatgaagagataagttcacttaatagatgtccagtttacgttatg
tcagtgatccttactgtgatatgcatcttaattgggatttgtactttcctggataaacct
gtccaatccaaactagtggaaagcagtttcgaccttggatacactgtcttgtacactgcc
tacgacatagaaacgttttctgataacattgtcaaggacctaaatcagctagcttacgat
gactttgacggattcactgatgagataatggacagactggatggtgccgacgaagagatc
tcggatccactcctacgagaaacatattctcatctcgatgccatagccgatcacttggat
aattttttgaacgagctggaactcttcaccttggagaacaacacttttggtgaaattaat
gagacaatcaacaggatcctaacaggaagtgaagatctcgaaattgcattagacaacgtc
gctgctaatttaacagacattaagaccgactgtttggcggatcctatccgcgctggactc
ggtgtttgtgactctcttcctgatccaaatgagcttgaagttagcttggatttaacacag
ttgacgtcgatcagtgacagacttgatcctctccttatctttgacagcacaaactcgaca
ataacagttgttttcgatcttcttaacgagatcaaccaatctctgtccgctgttccagag
gtcatccaaaatcaaacaaaagaattccaaagcaccgtgaacagcaccctccttagtatc
ggaagaagtataaagacgtccgtagatgaatcagtcgaaatattggagagttttgatgtc
caagaaatgatgcaaactgagatgattgaaaacgaattatggaaagcagaattagatagt
tatatgaattacgagtttatactgagggcagctcttggtgggtttctactggtgctattg
tctttagctgggctctgctttggctgtgttggatacgacagtaacaaaccacccagccaa
caaagtggaatcaccaactgtggaggtaaaatgtctatgtgtgctgcagtctgggccttt
ctgatagcttttataatatgtttcggggcggccatattgttcctggtcgggagtaatttg
actcttgtttgtgatgatctgcaggatttaacaattattgaagaagttgtggataatcct
gccctatggaatggcgagcatccattggccagtatatcagggaacgctaacatgactttc
tactctcttcttgaacaatgcggtgaagatgatacgatagccggcatattgggtttgact
gatatgttagatacggactctctggacattagaggagaaataccagatttggacgagttg
gcacactcaattaaccagtcgtttggggaaatgggtttctccaatgtcgatataagttcc
cagattcaacgccttaatggacagtttttgcctgcaaatgttacggaacaaatatcaacg
ataaaaaacgcgactgctttcattgatgtgaagagcatagcaaatgacttggacagtcaa
gctgctgctgtcagaagttcataccctgacatggcgagttcgctggaagggcttgcgaca
aaactacgaaacattcaagatgaaatagtggaaggaatcgctaacgatacggttctgctc
caagatcaactaagtgatatgaattcatcaatcaatacattaatgggggagacttctccc
atcctaacatctgtggacgacatcatggaattcgtccaaatcgatgctctcttgctcgtt
gtcgagaccctggaaacgttcattgacgacattgtcactgtagcggaaaattttacaaat
gaaagtattgagcgggttaaaaacgacatcggaagatgcgggatcgttcgattgatctac
gattctttggtgaatggattctgtgacggtttcatggcggcaattaccctttattggatg
agtgtgtctgtgttttctctctgtctgttacccttcatctgtttcaatgtcagaattgct
aaataccaccgccgagcacaaccttctaatgtgcaacatccacagtatctaccgccccca
ggctcaatcaaagtttatccaccggttgccatttaccagactctacctgcgcataaaata
tga
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