Apostichopus japonicus (Japanese sea cucumber): 139967335
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Entry
139967335 CDS
T10891
Name
(RefSeq) UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
139967335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139967335
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
139967335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Dynactin_p22
Topoisom_I_N
GCK
Motif
Other DBs
NCBI-GeneID:
139967335
NCBI-ProteinID:
XP_071827122
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All DBs
Position
5:3711838..3724730
Genome browser
AA seq
901 aa
AA seq
DB search
MASQQRDQKSSYQLDHQLLVELANLVEELTTTGETTLDVESMRKLKKICKKSDGYVDYAH
KQLMSQLEQEHAEIRLSTFQVMNELFQRSHSFRELLVAEMQEFLLLTVETDVDFPLPPPK
AAAELLKQQTLVAIADWNSKFGKAYKKLGVGYNFLKHCKKINFDSILVTLEAEREQERNR
AEQEERKRQERFSQAVQEMTEIIPEIDKCLQETESCYNILFPKNSFFMDTESPMVSSEKS
EDKRDYSVSMSGQRSDTSHSSNPTADVNKHLENGDVGSQRNTEKLSAEDTKTSMDSEAGL
TPEGDLASTSSCQQSEPKQGSGGCDINPEESLCNTEEKEGINVGHAGKASTSGTIDSGGK
ENDAVTYRGSKYTKGDRDIDEGQEEGDASEDELEDEEEDEEEEEEEEDDDAQSDQMQSHG
VRSFIQNISIDIEIPTEGVMLVEDDNNTDLLSALDDAKRLLDSKYMKQVQSWIESFKKAN
KTETDFFKKCVDMHSSLTEALEKYNDLKIKRKPRTRRVESAAPDSDDEFEDVPEKEGYEP
FIEESRRAEYGLPPLAQKTSSSSKHMAASSLASSSSSSSGFTPQPTERHHLDWHPLLSCE
HDPRDPTSRAATLAVWDKETKATSTGTKRPNLNQEGDGTDVNKSDAIPPTKVKKEEGQGL
LARAPFIPYGVDLEHWDNPGAVKAPVVLRPQTDNRIWTSNSLGDELVLESAKEHLTRRVF
SFTGSFVPVKWKCRAPLSSGQLCERMDRLKCPFHGTVIPRNEDGTPSNPIDDTKVKVEDD
TAPPEEESVPVLPSIETPSSSWQDPELLRDIEAATGMDLTVKKGKGRKGGQKGKGKKGKK
GAKKYPGLTDLTKRTNTSRTRLGKQVFNKSTLKRVNAKLSALDNRRVRDKFSNQFHYALS
Q
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcaacagcgggaccagaaaagttcctaccaattggaccatcaactgttagtt
gagttggcaaatttagtggaggagttgacgacaacaggagagacaacccttgatgtagag
agcatgagaaagctgaagaaaatatgcaaaaaatctgatggttatgttgactatgctcac
aaacagcttatgagtcagcttgaacaagaacatgctgaaataagactgtccaccttccaa
gtcatgaacgagctctttcaacgttcacattcattccgggagttgttggttgctgagatg
caagaatttctcctcttaaccgttgagacagatgtggattttcctcttccacctcccaag
gctgctgctgagttgcttaaacagcagacccttgtggctattgcagattggaattccaaa
tttggaaaggcttacaaaaaattgggtgttgggtataactttctgaagcattgtaaaaag
atcaattttgacagcatacttgtaacattggaagctgagagggagcaagaaaggaacagg
gcagagcaagaagaaagaaagagacaagagaggttttctcaagctgtacaagaaatgaca
gaaataattcctgaaattgataaatgtttgcaagagacggaatcgtgctacaatatttta
tttccaaagaattcgtttttcatggatacagaatcacctatggtatcaagtgaaaaaagt
gaagataagcgggactactctgtaagtatgtccggtcaaaggtcagatacatcacattct
tcgaaccccactgctgatgtgaacaagcatttagagaatggggacgtcggtagtcaacgg
aacactgagaaattgtccgcggaggatactaagacgtctatggattcagaggcaggcttg
acgccagagggagacctcgcctctacatctagttgtcagcagtcggaaccgaaacaaggc
tcaggaggatgtgatataaatcccgaggaatcgttgtgcaatactgaggagaaagaagga
attaatgtaggacatgctgggaaagcatcgacatcaggaacaatagatagtggtgggaag
gagaatgatgcagttacttacagaggcagtaaatataccaaaggtgatcgggacattgat
gaagggcaggaggaaggagatgcaagtgaggatgagttggaagatgaagaggaggatgag
gaggaggaggaggaggaggaggatgatgatgcacaaagcgatcagatgcagtctcatgga
gtcagatctttcattcaaaacatcagtattgacatcgaaataccaacagagggtgtgatg
ctggtggaagatgacaacaacacagatctcttaagtgctctagatgatgccaaaagacta
ttggattcaaaatacatgaagcaagtccagtcttggattgagtcattcaagaaagccaat
aaaactgagactgacttctttaagaaatgtgtcgatatgcacagctctctaactgaggcc
cttgagaagtacaatgacctcaaaataaagagaaagcctaggacgagacgagtagagagt
gcagcaccagacagtgacgatgaatttgaagatgtaccagagaaagagggttacgaacca
ttcatcgaggaatctaggagagcggagtatggactacctccactggcacaaaagacatcc
tcttcatctaaacatatggctgcatcgtctttagcatcttcatcatcatcatcatctgga
ttcacccctcaaccaactgagagacatcacttggactggcatccattactcagctgtgaa
catgaccccagagacccaacctctcgggcggctactcttgctgtatgggataaagaaacg
aaagctacatctacaggaaccaagagaccaaacttgaaccaggaaggagatggaactgat
gttaacaaatccgatgctatccctcccacaaaagtcaagaaggaggaaggccaaggttta
ttagctcgtgctccgttcataccatatggggttgacctggagcactgggataatcctggg
gctgtgaaagctcctgtggtgctcagaccacaaactgacaatagaatctggacatcaaac
tcccttggggatgaacttgtacttgagagtgcaaaagagcaccttaccagaagagtattc
agcttcaccgggtcgttcgttcccgtcaagtggaagtgtcgagccccgctgtcatcgggg
cagctttgcgaaagaatggataggttaaagtgccctttccatggtacggtaattccacga
aatgaagacgggacgccctctaatcccatcgacgataccaaagtaaaagttgaagatgat
acagcgccaccagaagaagagagtgtcccagtgcttccgtccattgaaacaccctcttcg
agttggcaggaccccgaactgttgagagacatcgaagccgccacggggatggatctcact
gtgaagaaaggaaaggggagaaaaggtggccaaaaaggaaaaggaaagaagggtaagaaa
ggtgcaaaaaaatatccaggactcacagatcttaccaaaaggacaaacacctcgcgtaca
agactggggaaacaggttttcaacaaatcgaccttgaagagagtcaatgccaagctttca
gccttggacaaccgcagggtccgagacaaattctccaatcaattccattacgccttgtct
caatga
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