Apostichopus japonicus (Japanese sea cucumber): 139967452
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Entry
139967452 CDS
T10891
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ajj04147
]
139967452
04090 CD molecules [BR:
ajj04090
]
139967452
Exosome [BR:
ajj04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139967452
CD molecules [BR:
ajj04090
]
Proteins
139967452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Baculo_PEP_C
TACC_C
Tweety
ATG17_like
DUF7201
CtIP_N
UPF0542
DUF948
COG6_N
YabA
DUF2205
Bac_rhodopsin
Motif
Other DBs
NCBI-GeneID:
139967452
NCBI-ProteinID:
XP_071827381
LinkDB
All DBs
Position
5:complement(6823605..6881768)
Genome browser
AA seq
966 aa
AA seq
DB search
MKNRSSWFVWTAFCNLILITGIYERTIKVDGAVTPSINDDGTINWGMFDPIPKSNLELSF
DDIKHPKVLSDMSQGFVDFVVHGLPYETIRNVLIDLNDNGEIEDIGATAGELILGFIGVV
ILVLIGILLFFLVPFIGFCFCCCRCCGNCGGKREQVDSSLGCKRVTLSIIFVALLGILGA
GMALTNTANDFQKDSLLKSDVALNTISDGVLNYTSDVLKQVKFMVDDQYGFVDELLRTNL
IENTLATDVTTYIKQDLKLEEVTDDLDKLSEDLQSVETSFKNINEERSELIEQDNILKNN
LTVIEQRIEAVKTSCPTCDIPEFNSQVNGNIPQLPEISQDQIGDVNGGVETVDEFNQKID
DALGDIEATISDETNQTAYEVIGELDEIQKIIDENFKTVEDVLNDVNDAVKDVQKGYEEN
LDSINNWLNYRWLFFLGVSCSILFVLVLMILGFTMGTICYRKGSPRERSSCSNCGGNCLM
WTVFFMFVLFPILILLTCAMFAGFSLATATCTPLETFEIFEETIDYPNTLTDGYWLGDII
YGNGSYEVTISGMLEACKDDETLYKAIKLDYLIDFDEMKKKFEDLEGQLDGLVGDIEDIS
LDLDGIIPPDLQNDLNNLISQVGIDDFDAEAYQALLPNPVLNGTDYLTSYADELDEIAAA
NPNQTKELNDIAEDLRSLQISVVDPMSQSVAHIESNITTVEHVNETLPSSIDSTLQAAAE
VEAAVSSVNETELVVNITEVYIKSVVNVGESYYDETTHQIENDFAKCYNVYDIYSTGLFY
TCGYVLSSGNALWFTIGWSVFFFLPSIIFSVKLAKHYRIMKKVRPPKQKKQTNNRNREDF
GMNEMQNGNGHDERLLYPHRYGGGGMTPVDNPQFIPAPIPRSHNAWITRDEGPIMAYDYK
GNPIAPPPAYNHGNRNNGYTEYQDPPAYRPDPRGQPGRGPNPNPYARGPSASIDMRNMNP
VYDDMF
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagatcatcgtggttcgtttggactgccttttgcaacttaattctcataaca
gggatttatgaaaggactattaaggtagatggggcagtaacccccagcatcaacgacgat
gggaccattaattgggggatgtttgaccccatcccaaagtccaacttggagctgtcgttc
gacgatatcaaacatcccaaggtcctctcggatatgtcgcaagggtttgtggactttgtc
gtccacggattaccctacgagaccatcaggaatgtcctcatagacttaaatgataatgga
gaaattgaggatattggtgctaccgctggggagctcatactaggttttattggtgtggtt
atattggttctgatcggaattctactgtttttcctggtgccttttatcggcttctgtttc
tgttgctgccgttgctgcggtaactgcggtggtaagagggaacaagtggactcaagtctg
ggctgtaagagggtaacactgtcaatcatatttgtggccctccttggtattctaggggct
ggaatggctttaacgaacaccgcaaacgatttccaaaaagattccctgcttaaatcagat
gtagcacttaacaccatcagcgatggcgtattgaactacaccagcgacgttttgaaacaa
gtgaagtttatggtcgatgaccagtatggctttgtcgatgaattacttcggactaattta
atagaaaacaccctggcaaccgatgtaacaacttacattaaacaagatctaaagttggag
gaggtgaccgacgaccttgacaaactctcagaagatttgcagtccgtggagacttcgttt
aagaacatcaacgaggagagatcggagctcatcgaacaggacaatattttaaagaataat
ctgaccgtcatagagcaaagaatagaggcagtgaaaacgtcttgcccaacatgcgacatc
cctgagtttaactctcaggttaatggaaacattccacagcttccagaaatatctcaagat
caaataggcgacgtgaatggcggagttgaaactgtggatgaattcaaccaaaaaatcgac
gatgcattaggtgacatcgaggccactattagtgatgaaaccaaccaaacagcttatgag
gttattggtgagctcgacgagatacagaagatcatcgacgaaaactttaaaacagtggaa
gatgttctaaatgatgtgaacgatgctgtcaaagatgttcaaaaaggatacgaagagaat
ttagattcgattaataactggttaaattatagatggttgttctttctcggggtcagctgc
tccatactcttcgtgctggttttgatgatcctgggcttcaccatgggtaccatatgctac
cgtaagggaagtccaagggaacgttcaagctgttcaaactgtggtggcaactgtctcatg
tggacagttttctttatgttcgtgctgttcccgatcctcatactcctgacctgtgcgatg
tttgccggtttcagcttagccaccgctacctgcacgcctctcgaaaccttcgagattttc
gaagagactatcgactacccgaacaccctcaccgatggctactggttaggagacatcatc
tacggtaacggttcttacgaggtaacaatttcagggatgctagaagcatgcaaagatgat
gagactttatacaaagctatcaaactggactatttgatcgactttgacgaaatgaaaaag
aaatttgaggatctagaaggccaattggatgggcttgtaggagacatcgaagacatctcg
ttggatctagatggaatcattccccccgacttacaaaacgacttaaataacttgatttca
caagtagggatcgatgactttgatgccgaggcgtaccaagcgctgcttccaaacccagtt
cttaatggaacggattatctgaccagctatgctgacgagcttgatgaaattgctgctgca
aatccaaatcaaacaaaagaattaaatgatatcgcagaagacctaagaagtcttcagata
tcggttgttgatcctatgtcgcagtccgtggcccacatagagagtaacatcactacggtt
gaacacgtcaacgaaaccttgccatccagcatcgacagtaccctgcaggctgcagcagag
gtggaggctgccgtcagctctgtcaatgagaccgaactcgtcgtgaacatcaccgaagtc
tatatcaagtccgtggttaatgtcggtgaaagttactacgatgagacaactcaccagatt
gaaaacgattttgcaaaatgttacaacgtttacgatatctactccacgggtctgttttac
acttgcggttacgtcttaagttctgggaatgctttgtggtttacgatcggctggtccgtg
tttttcttcttaccctccatcatcttctcggtgaaactagcgaaacattatcggatcatg
aagaaggtgcggccgccgaagcagaagaagcaaactaacaatagaaatagagaggatttc
ggcatgaacgagatgcaaaatggaaacggtcacgatgagaggttgctctacccacacaga
tacggaggaggaggtatgacaccagtagacaatccacagtttattccagcacctattcct
aggtcacataatgcttggataacaagagatgaagggccaatcatggcctacgattacaaa
gggaaccccatcgccccgcctccagcctacaaccacggtaatcgtaacaatgggtacacc
gaataccaggacccacctgcatacagacctgaccctcgagggcaacctgggcgtggcccc
aaccctaatccatatgcacgaggtccgtctgcgagtattgacatgagaaatatgaaccca
gtctatgacgatatgttttag
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