Apostichopus japonicus (Japanese sea cucumber): 139967556
Help
Entry
139967556 CDS
T10891
Name
(RefSeq) pseudouridylate synthase TRUB1-like
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ajj03016
]
139967556
Enzymes [BR:
ajj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
139967556
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
139967556
Prokaryotic type
139967556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
139967556
NCBI-ProteinID:
XP_071827573
LinkDB
All DBs
Position
5:complement(9017976..9022663)
Genome browser
AA seq
264 aa
AA seq
DB search
MAKAKFLNGLFAAHKPAGVSSASITNHIKEVIIQGLKQQGEVKVSGGNNPTTTIKVGHGG
TLDLNASGVLVLGIGRGTKALGPYLKGQKKYKAVGLLGKATDTHSEDGNLTVELPYDHVT
KDKMLDVLMNFRGIVKQVPPIYSSLKFKGHTMASLAAAGFPVEAKPARMVSVYNIHCTSF
KPPTFSFEIACSGGFYVRKLIHDIGKELGTCACMKSLERTQQGPFHLRKNVLEERDWTFP
KILEALKDNKELNLKDNRKEEVRL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagctaaattcctgaatggcctctttgcagctcacaaaccagctggtgtctca
tcagcatcaattaccaaccatataaaagaagtaattattcaaggcttgaagcaacaaggt
gaagtgaaagtatcagggggtaataacccaactacgacaatcaaagttggacatggtggc
actttggacttgaatgccagtggtgtattggtcttaggtatagggagaggaacaaaggca
ttaggtccttacttgaaaggacaaaagaaatacaaagctgttggattactcgggaaggct
accgacacccacagtgaagatggtaacttgacagtcgaattaccctatgatcatgtgaca
aaagataaaatgctagatgttctgatgaatttcaggggaattgtgaagcaagttcctcca
atatactcttccctcaagttcaaaggtcataccatggcatcactagcagctgcaggtttt
cctgtggaggctaagccagctagaatggtctctgtctataacattcattgcacttcattc
aaaccaccaactttttcctttgaaattgcctgcagcgggggtttttatgtcaggaaactg
attcacgacatcggaaaagagctcggtacttgtgcctgtatgaagtcactggagcgaact
caacaaggaccgttccacctccgtaaaaatgtactcgaagaacgggactggacatttccc
aaaatattggaagccttgaaagataataaagaattaaacttaaaagacaatagaaaagaa
gaagtaaggttatga
DBGET
integrated database retrieval system
