Apostichopus japonicus (Japanese sea cucumber): 139967563
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Entry
139967563 CDS
T10891
Name
(RefSeq) F-box only protein 41-like
KO
K10316
F-box protein 41
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ajj04121
]
139967563
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139967563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
zf-Di19
ATPase
RNA_binding
Cut12
FapA
Motif
Other DBs
NCBI-GeneID:
139967563
NCBI-ProteinID:
XP_071827593
LinkDB
All DBs
Position
5:9343570..9361714
Genome browser
AA seq
765 aa
AA seq
DB search
MICPVCHLELSKASLRSHLSVDHSERQLQLTLQADAVPVSNANREKPVVFTPEAKELLSQ
LDHARRLHNQNLLSQRKALSTLSRTLMPASPLKGSITKEDVKGYPQRLQNGSYSPRESID
QMLVQSAQGKHAGTNFAADVTACSCRMHQRTISSLEVSLREKKKQVVELTQKLKQEMEKL
EDKDMVISDLNTFLQETAEKQSIARAQLEGYMDNLITRTVQAENEVKNLQMLSSPSSSMN
RSSGSFSPRGTPGVAHRVERRQKRSPSMELKRTLQEIRWKDGKGTPSSSSPERTSSPPSI
TKSPFHISLYQAPKIYQPEVVKNQKSHTSSGRLQLLRSLTGEVSHPQERPATVRGSSGLN
SLRGSSSARLERLLYQQELSKGEEETKLWRTQTPRFSLTGSVSSNEDSSSISVSSLSGVS
SSLLETGTIPSGHCHLDRLSASQRHFILHSVMEFLDIDSKLGCAVVCKEWRTLSRQPSLW
RHIILDKRRISSKFLRTVSSWCLELQTLKLSRIKPPTKRRPGETKEVYQKRTRGILDDGI
ESLLAASQNNLMIVKITSCQQLLTKKSYLKIAQYCPCLNILKLDYCAIRTEVIRSLAKGC
KQLTSLQIVPDAKRDGNKNMTNSNLHFIGSTWYQLQALSIGGKNFSKSGLLSVVENCQLL
QILELSRAQKVNEDAAKKMCRVGLKELHTFLFTNTIVTPQAILHLYVSCPQLKSIRVYLH
LSDVFPGRDNANQYRVKFDDAVSELQRLKEHPGLGAVLQVRADID
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgatatgccctgtgtgtcatttagaactgagtaaggcaagcttgaggtcacatttgtcg
gtagaccattctgaacgccaacttcaattgacgctgcaagctgacgctgttccagtctcg
aatgctaacagagagaaacctgttgtattcacacccgaagccaaggaattgctttcgcaa
ttagaccatgccagacgtctccacaaccagaacttgctgtctcaaagaaaagccctcagt
acattgtcaaggacgttaatgccagcgtcacctctgaaagggtccatcaccaaggaagat
gtaaaaggatatccccaacgattacaaaatggatcatacagcccacgagaatccatcgac
caaatgttggtacaatcagcacagggaaagcacgcaggaaccaattttgctgcagatgta
acagcatgtagttgcagaatgcaccagcgaaccataagcagtcttgaagtgagtctgagg
gagaagaagaaacaggtcgttgaactgacccagaagctgaaacaagaaatggagaaactc
gaagataaagatatggtcatttctgatctcaacacattcctacaagaaaccgccgagaag
cagtctatcgccagagctcaactggaaggttacatggataatctgatcacaaggacagta
caggcggagaacgaagtcaagaatctacagatgctatcatccccatcctcatcaatgaat
aggtcaagtggttcttttagtcctcgtggaacaccaggggtagctcaccgtgtagaaaga
aggcagaaaagaagcccatccatggaactgaagagaactctgcaagagattagatggaaa
gatggcaagggtacaccgtcttcttcatcaccagagaggactagttctcccccgtccatc
accaaaagtccatttcacatttctttataccaagctccaaaaatatatcaaccagaggtg
gtgaagaatcagaagagtcatacctctagtggtaggttgcagttattacgaagcttgaca
ggtgaagtaagccatcctcaggagagaccagcaactgttagaggttcgtcaggcttgaat
tctctgagagggagctcgtcagctcgtcttgagaggctgttgtatcagcaagagttatcc
aaaggagaagaagaaactaaactgtggcgcactcagacacccaggttttcattaactgga
tctgttagtagcaatgaagatagcagcagcatctcagtgtcatctctgtctggtgtgtca
tccagtttgctggaaacagggacaattccatcaggtcactgtcatcttgacagactttct
gcttcacaacgtcacttcatattacactccgtgatggaattcctggatatcgattccaag
ctaggctgtgcagtcgtctgcaaagaatggagaaccctcagtcgtcagccctccctgtgg
agacacataatcttggataaacgaaggatctcatcaaaattcctgaggacagtctcatct
tggtgtctagagttacaaaccttgaaactttccagaatcaagccgccgacaaaaagaagg
ccaggagaaacgaaagaagtctaccagaagagaaccagaggaattcttgatgatgggatt
gagtccttgttagctgcatcccagaacaatttaatgattgtcaaaataacaagttgtcaa
caattgttgacaaaaaagagttacctcaaaattgctcaatactgtccttgcttgaacatt
ttgaagttagattattgtgcaataaggacagaggtcataaggtcattagccaaagggtgt
aaacaactaacatctctacagatagttccagatgctaaaagggacgggaataaaaatatg
actaacagcaacctccattttatcggaagtacttggtaccagctgcaagctttgagtatc
ggtggcaagaactttagcaagtctggattgctttcagttgtggagaattgccagctgtta
caaatcttagaattatcaagagcacagaaagtaaacgaagatgcagccaagaagatgtgt
agggtgggccttaaagaactccatacattcttatttacaaacacaatagtcacacctcaa
gccattttacatttatatgtttcttgcccgcaacttaaatccatccgtgtctacctccac
ctgtcagatgtttttcctggtcgagataacgccaaccagtacagagtaaagtttgatgat
gctgtatctgagctgcagaggctaaaggaacaccctggtcttggagccgtacttcaggtc
agggctgatatagattga
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