Apostichopus japonicus (Japanese sea cucumber): 139967695
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Entry
139967695 CDS
T10891
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ajj04147
]
139967695
04090 CD molecules [BR:
ajj04090
]
139967695
Exosome [BR:
ajj04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139967695
CD molecules [BR:
ajj04090
]
Proteins
139967695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
DUF5968
REF
TRP
DUF1980
Motif
Other DBs
NCBI-GeneID:
139967695
NCBI-ProteinID:
XP_071827805
LinkDB
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Position
5:complement(12601240..12658443)
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AA seq
864 aa
AA seq
DB search
MTRTVEWRLVPLLFFSVIVFSGSFVAGQNINDNGTLTFDALPEGDAYNIDSGDIELGGFT
LKTTWNIIDGFLKLISPAGPPYDVIIDVISGTIDIDIQSLFSKVQGNITGFVVLFFLGLL
FAIIFFLFLIFFCCCRLLCDNCGGKMEQTNSSNFEKLRCVYTGILLLMLFCLIFGAVTAL
AVSGYTSSQVSDLPDTINNNIDDMLTYVNNTVEEINFLIDKQLPWTVKQVSNDLNDVGDL
VGVPVREGLRPTVGAAIAAVYPLANNLSATLSAMEDVNSTQFDLEYLYVDLDTNLSSILT
RLDTQCVTCNCCSGFAYSGLSMNMDPRDTQLSPSVSGTFPQEALDASIMALRDVVDLDLS
SAADNGSEIFENIPTVLADTTSELADELTKVLSKVSGTISSSVEPVESKISALNTQAEEV
QDFLTPILVDVVAYDGFRDIAMTVVFGFILFLAGLFVVGVCLAISGCILNKSPPSKRSSL
ESCGGCVIMIAAVLSGLLVPPFMLVSSFTFITGGPIDRLVCDNVISREIFVETIDKPDAI
IDGYFLGDLLFQNSSIDITVTGLLNACENNKGIYTAFKLENLIDIAQFTNIGQYVGDLDS
QFDNITVDFSNVNILTGDTRSSLEEFQNSSNYEISWDVFLAELSKPVTYDVNQGNDLSVL
AGTMRTAAATINNTGDKAAIEGFAEELDVIQTNLMAPFIDTKNTLESQIDVLPDYTGKID
MLITDTLDAADLAQAYLDADATSLLQANIMGFKTRILGYPYQFADYIESQIQNEVGKCLP
VYNLYSSAVNTVCVGFIQAFNGFWYCLGLCCITMIFTFAFGVKSAKYYRRMDRDSGFDER
EYGLPLTNADLFEGENQVAPQQDD
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaccagaactgttgaatggagattggttccgttactgttctttagtgttattgtattc
agtggatcttttgtagcaggccaaaacataaatgacaatggaaccttaacttttgatgcc
ctcccagagggtgatgcttataacattgattcaggtgacatagaacttggaggatttaca
ctcaagacaacttggaacattatagatggattcttaaaactgatttcacctgcaggccct
ccctatgatgtgataatagatgttatcagtggaaccatagacattgacattcagtcttta
ttttcaaaggtgcagggcaacataaccggtttcgtcgttctgttttttctcggtctgttg
ttcgccatcatcttcttcctcttccttatcttcttctgctgttgtcgtctgttgtgcgat
aactgtggaggaaagatggagcagacgaattcctcaaattttgaaaagttgcgctgcgtc
tacacaggcatattactactgatgttgttctgccttatttttggtgccgtcactgctctg
gctgtgagtggctatacttcatcacaggtgtccgacctaccagatactatcaacaataac
atagatgatatgctgacctacgttaataacacagtggaggagatcaatttcttgatcgat
aaacagttaccatggaccgtcaagcaggtttcaaatgatttgaacgatgttggagattta
gttggtgtacctgtcagggaaggtttgagaccaacagtaggagctgctattgctgctgtt
tacccgctggcaaataatctgtcagctacactttctgcgatggaggacgttaatagtacc
cagtttgatttggagtacctctacgtagatctggatactaatttaagctccatactgact
agactggatacacaatgcgttacctgcaattgctgtagcggctttgcctactctggcctc
tccatgaacatggatccgagagacactcagctctcaccgtcagtttcaggcacattcccc
caggaagctttggatgcatctattatggcgctgagagatgttgttgacctggatttaagc
tctgctgcagataatggctcagaaatctttgagaatatcccgaccgtgttagccgacaca
acgtcagagcttgctgatgagctaacaaaagtcctatctaaagtatcaggtactatttct
tcatcggtcgaaccagttgaatcaaaaatttccgctcttaacacgcaagcggaggaagtt
caagatttcttaactcccatccttgttgatgttgttgcgtatgatggattcagagatatt
gcaatgacggtcgtgtttggtttcatactgtttttggctggtctgtttgtggttggcgtt
tgcctggctatcagtggctgtatcctcaataaatcgcctccttccaagagatccagtctg
gagagctgtggaggctgtgtgatcatgatagctgctgttttgtcaggactcttggttcct
ccgtttatgctggtatcttccttcaccttcatcactgggggaccaatcgacagactcgtc
tgcgataacgttatctctcgggaaattttcgtagagacaattgataagccggatgccatc
attgatggttattttcttggggacttattattccagaactcatcaatcgacatcactgtt
acagggttgctgaatgcctgtgaaaataataaaggaatctacacagctttcaaactcgaa
aatctcatcgacattgcacagtttactaacattggtcagtacgtcggtgatcttgattca
cagtttgataacatcactgtagatttcagtaatgtcaatatccttaccggagacactcgc
agcagcctggaagagttccaaaatagctctaattatgagatctcttgggatgtgtttctg
gccgagctatcaaaaccagtcacctatgatgtcaaccaaggtaacgatctctcagtttta
gccggcaccatgagaacagcagcagcgactatcaataataccggtgataaagcagccatt
gaaggctttgcggaggagttggatgttatacagacaaaccttatggctccattcattgat
acaaagaacacattggaatcgcagattgatgttttgcccgactatacaggaaagattgat
atgttgatcaccgacactttagatgcagctgaccttgctcaggcttatctggatgctgat
gccacttcactgttgcaagcaaatatcatgggatttaaaacccgcatcctgggatacccg
tatcagtttgcagactacattgagtcccagattcagaacgaagtcggtaaatgtctccct
gtctataacttgtattcatcagcagtgaatacagtctgtgttggatttatccaggcattt
aatggtttttggtactgcctcggtctgtgctgtatcaccatgatcttcacatttgcattt
ggtgtcaaatctgccaaatactacagacggatggacagagacagcggctttgacgaacga
gaatatggattacctctcacaaatgctgacctgtttgaaggcgaaaatcaagtagcccca
cagcaggacgattaa
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