Apostichopus japonicus (Japanese sea cucumber): 139967703
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Entry
139967703 CDS
T10891
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139967703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ajj04131
]
139967703
03036 Chromosome and associated proteins [BR:
ajj03036
]
139967703
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ajj04812
]
139967703
Membrane trafficking [BR:
ajj04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
139967703
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
139967703
Cytoskeleton proteins [BR:
ajj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
139967703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Hydro_N_hd
Trimer_CC
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
139967703
NCBI-ProteinID:
XP_071827828
LinkDB
All DBs
Position
5:12816082..12860960
Genome browser
AA seq
1280 aa
AA seq
DB search
MADKHVKPGTRVEITGKSLQGKIAFVGVTSFASGKWIGVILDEAKGKNNGLVQGKKYFTC
PDNHGIFVRQSQITILDGSPATTPIESKTSGIPKPGGKAEKKAEFRSKLMRPANRRSSMP
VYVSAQGRRSTLPTFKGGLSGRTSPATPPGQSPSPPSQSDHSAGTPEGKGSPLAGTPDGM
GKDSEEITNLKCAVQDLQEKLDTLKMKRAEDKSKLKEAEKMKIQYQQLQEFKAKMVEAKT
DLEKQLLEAKKEAREAVEERDRHAEEMAGVAETIEMAALDKEMAEEKADSLQIEVDQYKD
RVEELTLDLELLRSEIEQEGSDGAATSYQVKQLEQQNNRLKEALVKLRDLSNDEKQEHQK
AMKDKEKMGQDIKDLKAQKENTSKALSEAESQVIELKEQVDAALGAEEMVESLTEQNLEL
EEKIEKLETDLSDLEALNEMNEELQENNRETELELREELDLTKNRVQEAKRKIGQLEENI
TDHQETIAKFRQLTATLQEQNREMQSIHESAKETQETTGVVPAYDFTSKMVEAKVQAKAI
EVEIGKLEIVQARQHVKFLLSFMPDNFMRRGGDYDCVQVLLLIARLLAKSELVILQIRDK
VEVPEPLDREQALRHNLGEALSFTNHVNYLMAKLQAILNKYRVAMASCSVELYCKIGTLY
PEMTPHERPLDNIIDLLRQDQLDETTSLEGVEKAVAYFEHLHSVHLIQENMDHTNVMADH
VKMTTAAAELLGLELKKLKVFMQTNQETTDFAILLKDLDSSNGDLKQFSRMIRRRLPTGS
GDDQGGPSSISYGVEVQNSISECSDFLSKMVTAMRMFGQNAMKTASSLSDSPGKKKPENE
KEGDVEGIPVKQLEEYAEAACSAVFGKDDKGPYQSFRETLVKAMVVMNNISSAMQNGEYD
ANIPQEKVVGPVEKRALKVKAEICDAEGLGHKLESKENEVKDIKRQLKLKQEEVSAASVR
LGLVEKKLENASRDGEEKVHKLEQKLSNSQDHMKKKEREFDLTLDHMQNDIDALEKEKQE
LKQRLTQLSKKTLYESLTGRPGAPSSIAAAVVGETDGAPPSEQVQVRDSPLLLHQVESLK
KALYHVKRENTHLRGRKMKTIMDELPPLVVPKKPVGLMSPTGFVSIEVENPEKASPAANQ
LSDLVRQSGKLMKDLQELSASPRVVDITHRKPGTIPVLDKALPMHQLVERTSRLISLQQT
LAEVQLQTEKLVTRQRPGAQTKGDFSKFISSEFAKVRDEKSSPPCIGRITMPTGKGQEAC
HIAVKLSQPQLRNLHAKLIQ
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagcatgtcaagccaggaacaagggtggaaatcactggaaaaagcttacaa
ggaaaaatagcatttgttggagtgacttcatttgcatccggtaaatggattggggttatt
ttggatgaagccaagggcaaaaacaatggcttggttcaagggaagaaatacttcacatgt
ccagataaccacggtattttcgttagacaatcacagattactatcttagatggctcacct
gctaccaccccaattgaatctaaaacctctggtattccaaaacctggcggtaaagcagag
aaaaaagcagagtttcgttcgaaacttatgagacctgcaaaccgcaggtctagtatgcct
gtctatgtgtctgctcagggtcgaaggtcaaccctaccgaccttcaaaggaggtctatca
ggcaggacttctcctgccacccctcctggccagtcaccatcgcccccatcgcaatctgac
cattctgcggggaccccagaggggaaggggtcacctctggcaggaacaccggatggcatg
ggaaaagattctgaagaaatcacaaacctcaagtgcgctgtccaagacctccaagagaaa
ttggacaccttgaaaatgaaacgagctgaggacaaaagcaaactgaaagaagcagaaaag
atgaaaattcagtatcaacagctgcaagaatttaaagccaagatggtggaggccaaaact
gacttggaaaagcagttgctggaagctaagaaggaggcgcgagaggcggtcgaggagaga
gacaggcacgcagaggaaatggcaggagtcgcagagacgatagagatggcagcattggac
aaagaaatggctgaagagaaggcggatagtctccagatcgaagtggatcaatataaggat
agagtcgaagagctgacccttgaccttgagctcttgcgcagcgaaattgagcaagaaggt
tctgatggtgctgcaaccagttaccaggtgaaacaattggaacaacagaacaatagatta
aaggaagctttggtcaagttgagagatctttccaatgacgaaaaacaggagcatcagaaa
gcaatgaaagataaggagaaaatgggacaagatattaaagatctcaaagctcaaaaggaa
aacacttcaaaagctctctcggaagctgaaagccaagttatagagctcaaggaacaggtc
gatgctgctcttggtgcagaggaaatggttgaatctctgacagagcaaaatctggaactt
gaagagaagattgagaaactggaaactgacttatcagatttggaagcgcttaacgagatg
aacgaagagcttcaggagaacaaccgtgagacggaactggagttacgagaagagttagat
ctgacaaagaaccgggtccaggaggctaagcgtaagattggtcagctggaggagaacatc
acagaccatcaggagaccatagctaagtttagacaactgaccgccaccctacaggagcag
aaccgcgagatgcagagcatccacgaatctgccaaagaaacccaggagacgactggagtg
gttcctgcatatgattttacatccaagatggtggaagctaaagttcaagctaaggctatt
gaagtggaaattggaaagttggagattgttcaagctagacaacacgtcaaattcttgctg
tcgttcatgccagataatttcatgagaagaggaggtgactatgattgtgtgcaagttctg
cttcttattgctcgactgctggcgaaatcagaattagttattttacagataagggataag
gtcgaggttcccgaacctttggaccgggagcaggctctgagacataacttgggtgaagcg
ctgtcatttacaaaccatgtaaactatctgatggcaaagttacaagctatcctgaacaag
taccgtgtagccatggcctcatgtagtgtagagctgtactgtaagattggtaccctgtac
cctgagatgacaccccatgagagaccattggataacatcatagacctactcagacaagat
cagctggatgagaccactagcctagagggggttgagaaagcagttgcatactttgaacat
ctgcacagtgtacatctgatacaagagaacatggaccataccaatgtgatggcagatcac
gtcaaaatgacgacagccgctgctgagctgttgggattggaattaaagaaactcaaagtc
ttcatgcagacaaaccaggaaacgaccgattttgcgattcttctcaaggacctggatagt
tctaatggagacctcaagcagttttccagaatgattcgtagacgtctccccacagggtcc
ggcgacgaccaaggaggaccatcctccatctcatatggggtcgaggttcagaactccatt
tctgagtgctcagatttcctctccaagatggtgactgcgatgaggatgtttggtcagaat
gccatgaagactgccagttccctgtcagattcacctggcaagaagaaaccagaaaatgaa
aaggaaggtgacgtggaaggaatacctgttaaacagctagaagagtatgcagaagcagca
tgcagtgcagtctttgggaaagatgacaaaggaccttaccagagtttcagggagactctt
gtgaaagctatggtcgtgatgaataatatcagctcagccatgcagaatggggagtatgat
gccaacataccacaagaaaaggtcgttgggccagtcgaaaaacgtgctttgaaagtaaag
gcagagatttgcgatgcagagggcctcggacataaactagaatccaaagaaaatgaagtg
aaggatatcaaaagacaactcaagttaaagcaagaggaagtaagtgctgcatctgtcaga
ctaggcctggtggagaagaaattagagaatgctagtcgagatggagaggagaaggtccac
aagctggaacagaagttatcaaattcccaagaccacatgaagaagaaagaacgagagttt
gatctcacattagatcacatgcagaatgacatagatgctttggagaaagagaagcaggaa
ctgaaacagcgattgactcagctctccaagaagaccctctatgagagtctaacaggcagg
cctggtgctccatcctcaatagctgctgctgtggtaggggaaactgatggtgcaccacct
tcagaacaagtacaagtccgagattctcctttgctattgcaccaggttgaatccctaaag
aaagccctgtaccatgtgaagagagaaaatacacacctgagaggtcgtaaaatgaagacc
attatggatgagcttccacctttagttgttccaaagaaacctgtgggattgatgagtccg
actgggtttgtgtccattgaggtcgagaacccagagaaggcttcccccgcagccaatcag
ctctctgatctggtgcgacagtctggaaagctaatgaaggatcttcaggagctcagtgcc
agtccaagggttgttgacatcactcatcgcaaacctggaaccataccagtcctggacaag
gcactccccatgcaccaactagtagaacggaccagcaggctcatatcacttcagcagacc
ctagccgaggttcagctacaaacagagaaactggtgactcgtcagagaccaggcgctcag
acgaaaggagatttctcaaagtttatatcttcagaatttgctaaggttcgagatgagaag
tcatctcctccttgtattggtcgtatcaccatgccaaccgggaaaggtcaagaggcctgt
catatagcagtgaagcttagccaaccacaattaagaaacctgcatgctaaactaatacaa
taa
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integrated database retrieval system
