Apostichopus japonicus (Japanese sea cucumber): 139967800
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Entry
139967800 CDS
T10891
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
Enzymes [BR:
ajj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
139967800
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
139967800
Prokaryotic type
139967800
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
139967800
NCBI-ProteinID:
XP_071827996
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Position
5:complement(15160764..15173071)
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AA seq
535 aa
AA seq
DB search
MSKFMNTFLLRGFQRLPGNLCNWSLRSTLRMASGETVIETAPKTSEKKEEKSDGVKRALE
GEVSGEPATKITKTEDSKPEGSTDTEKKVRYPKKKVAMLLSYCGVGYQGMQINPASKTIE
KDLLNALYKTGCVPDGSRMGKMNFQRCARTDKGVSAAGQVVSLRLLMLDNLVEKLNEHLP
SVIRVMDIKRTTGSFNSKHHCNYRTYMYLLPTYSFQDVEDITTETYRITDEKLQEVNDLL
AKYKGTHNFHNFTSGKLHDDMSANRYIMDFTCEKAFVDEGMEFAIMRVKGQSFMLHQIRK
MIGIIIAILRGFASKNTLEKAFESKKLDIPRAPGLGLVLESVHYDWYNKKWSGDGVHDSL
SWEDCKEKQEEFKRKHIYPNIIVREKYNKSMMHWLGTLPLHTYDVIEAHNPMRNFLITEK
KTGENSPLAKIPDQIPANVDLASFKPGQSPEEFLKSLPVSEANEKVVAMETVQNSTPPTG
VTKVDESIQEKESNQTEEKDLPKEAEKEKEKTEDEQEDENSSSKDRKHEEEEVTT
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatttatgaacaccttcctactacggggatttcaaaggcttcccggtaacttg
tgtaattggagtctcaggtcaacattgagaatggcctctggggagacggttatcgagact
gctcctaaaacatcagaaaagaaagaagagaaaagtgatggagtaaaacgtgcccttgag
ggagaagtgtcaggagagccagctacaaagatcacaaaaacagaggattctaaaccagag
ggctcaaccgacacagagaagaaagttcgataccctaaaaagaaggtagccatgttgctg
tcgtattgtggagttggatatcaaggaatgcaaataaatccagcgagcaaaacaattgag
aaggatctactaaatgccttgtacaagacaggctgtgtgcctgatggcagtaggatgggt
aagatgaactttcaaagatgtgcgaggacagacaagggtgtttctgctgcaggccaggtg
gtctcactccgactacttatgttggacaacctcgtggaaaagttaaacgaacatctccca
tctgtgattagagttatggatatcaagaggacgacaggaagctttaactccaagcaccac
tgtaactatcggacctacatgtaccttcttccaacctattcctttcaagatgtggaagac
ataacaacagaaacatacagaattacagatgaaaagcttcaagaagtcaatgaccttctt
gctaaatacaaaggcacccacaatttccacaatttcacctcaggaaagctacatgatgac
atgagcgctaataggtacatcatggactttacatgtgagaaagctttcgttgacgaaggg
atggagtttgccatcatgagggtcaaaggtcaaagctttatgttgcatcagattcggaaa
atgattggtatcattattgccattcttagaggatttgcctctaagaatacattagagaaa
gcatttgaaagcaagaaattagacattccccgagctcctggactaggattggttttagaa
tcagtccattatgactggtacaacaagaaatggagtggtgatggtgtacatgattctctg
tcttgggaagactgtaaggaaaagcaagaagaattcaaaaggaagcatatttaccccaac
atcattgtcagagagaaatacaacaagtctatgatgcattggttaggtaccttaccactg
cacacctacgatgtcattgaagcacataatcctatgaggaatttcttaatcactgaaaag
aagacgggcgagaatagtccgctcgcaaagattcccgaccagattccagctaatgtagat
ttggccagctttaagcctggtcaaagtccagaggaatttttgaagtccctgccagtatct
gaggccaatgagaaagtggttgccatggaaaccgtacagaactcgactccacccacggga
gtcaccaaagttgacgaaagcatccaagagaaagaatcaaaccagacagaagagaaagac
ctcccaaaagaagcagagaaagagaaggagaaaacagaagatgaacaagaagatgaaaac
tcatcaagtaaggataggaaacatgaagaggaagaagtaacaacttga
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