KEGG   Apostichopus japonicus (Japanese sea cucumber): 139967978
Entry
139967978         CDS       T10891                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:ajj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ajj04121]
    139967978
Enzymes [BR:ajj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139967978
Ubiquitin system [BR:ajj04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    139967978
SSDB
Motif
Pfam: zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 Prok-RING_4 zf-C3HC4_4 zf-rbx1 zf-RING_4 Rtf2 zf-RING_11 zf-UDP TRAF3_RING Zn_ribbon_8 FYVE DUF1272 Sina_RING zf-ANAPC11 Zn_ribbon_6 Lar_restr_allev
Other DBs
NCBI-GeneID: 139967978
NCBI-ProteinID: XP_071828333
LinkDB
Position
5:20072251..20084003
AA seq 207 aa
MDPDRTRRKRSRRIPSDGVVDLINHSNRRESSDPLILEEEGNGASTSVAIVDLTKESNDS
ILSGDIVDLTETNGFEDIEEVTPPKRSRGRRSRSAQQTGSGNSVVISSEDESDDSDDLVL
LNSPLPDEVTERLASLKPGSSPPKKLIKCPICYDDDTTIRRNGKKLMSTNCGHVFCEECI
RKSIDSLHKCPTCRKKLTRRQIHPIYL
NT seq 624 nt   +upstreamnt  +downstreamnt
atggatccagacaggacacgaaggaaaagatcaagaaggataccttctgatggggtagta
gacttgataaatcattcaaaccggagagaatccagtgatcctcttatacttgaagaagaa
ggaaacggtgcttcaacttctgttgccatcgtagatcttaccaaggagagtaacgatagc
atcctctctggagacattgtcgatcttacagagaccaatggctttgaagacattgaggaa
gttacaccaccaaagaggtcaagagggaggaggtcacggtctgctcagcagactggcagc
ggaaacagcgttgtcatcagtagcgaggatgaaagtgacgacagtgatgatttggttcta
ctcaatagtcccctccccgatgaggtcacagaaagattagcaagtttgaagcccgggtca
tcacctcctaagaaactcatcaagtgtccaatatgttacgatgacgatactacgatcaga
agaaacggaaaaaagctgatgtctaccaactgtggccatgtcttttgtgaggagtgtata
agaaaatccatagattcgctgcacaagtgtcctacgtgtaggaaaaaactgactcgtagg
caaatacacccaatctatttgtga

DBGET integrated database retrieval system