Apostichopus japonicus (Japanese sea cucumber): 139967994
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Entry
139967994 CDS
T10891
Name
(RefSeq) E3 ubiquitin-protein ligase RNF103-like isoform X1
KO
K15695
E3 ubiquitin-protein ligase RNF103 [EC:
2.3.2.27
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ajj04121
]
139967994
Enzymes [BR:
ajj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139967994
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139967994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
139967994
NCBI-ProteinID:
XP_071828358
LinkDB
All DBs
Position
5:complement(20409183..20416061)
Genome browser
AA seq
787 aa
AA seq
DB search
MPNSRRFAGSSRLRPTGLHTDSVAVMLLHLFVKVALLLLYLVFLIVLLRLLDLSAWYETG
FLATQLVDPLSLSVRKLKLLIESRGLAYEGILEREELIKLAENSGDIANADFSLLERKSV
IDAKQQKSEEFTGRAHFLEEVEDKKDSVWLIQVVPGAGLPLLGSSTWKSVIQKVSIFGIR
TGIFVCARDIRFCRQKGWSKPFVLLAMPDGHQYKDRVLMRQLSAPAQAPAVVDWVNQQLS
SKLMEIEDEKELCDHWLEFKSEEEIQQSVRAVIFTDREKPSIIFSALSMRYSGRIKFGYY
RKGSAKCIHFKPDSKTHLLISTSTGVQRYGLRKGEFLNYDALNLYLHTLVPEINDVFIIS
FVIVNMFCCMDLFLTSGGLAKILLCFFWQLAKLNLLFILLWLPLQWTFQLSVIAPLSNVF
WWSIQVLCQTGVAGQLRQDWLLHSQHWGIVCCLFGLYCFVCGWFVKKCRPQSQEDNLSSV
DWMRLIFHQWHLFMIRPRNIWQQGGPQISTSLEEGLDLFLERTTPDLWLHPIITGEYVHN
LPQWKYGGFRKSQDEKYCFKHLCGSCQESWQKFFCMKTEADRQERFEKSCEEIRQMFTER
QSKKEKAEIHGAQGIKDKEFYEVFEDGHNKETKIVEMQPTKGSKVTENSTNLSEEKFCGV
CLDLICHIEEGESGKAIVVKEPANLHHQDVGHGITATDIWSEESTQEENHTSGNQYDAWP
EEMLKSLECAICLEGYVLGSHLCGLPCGHAFHFDCVKVWLCGGKHCCPTCRWPAFKKKPS
KLSKYKE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgccaaactctagacgctttgcaggctcttccagactccggcctacaggtctccataca
gattcagtagcagtcatgttgctacacctgttcgtgaaggtggccttactcttgctctat
ctggtattcctgatagtgctactgaggttgttggatctgtctgcctggtacgagaccggt
ttcctagccactcagcttgtggatccactctccttaagtgtgaggaaactcaaactccta
atagagagcagaggattagcctacgaaggaattctggaaagggaagaacttataaagtta
gcagaaaactctggtgacattgccaatgctgacttcagccttttggaacggaaatctgtg
atagatgcaaaacagcagaaatctgaagagtttactggtcgagctcatttcttagaggaa
gtagaagataaaaaagacagtgtctggttgattcaggtggtccctggtgccggattacca
cttcttggctcctcaacatggaaaagcgtcattcagaaagtctccatctttgggataaga
acgggaatcttcgtctgtgcgcgagatatacggttctgtcgacagaaaggttggtcgaaa
ccgtttgttttactggcgatgcccgacggacatcagtacaaagaccgcgtgttgatgcgt
cagctgtccgctcccgcacaggctccggcagtggtcgactgggtgaatcagcaactatct
tcaaaactgatggaaatcgaggacgagaaggagctctgcgaccactggctggaatttaaa
tcggaagaagagattcaacagagcgtccgagctgtcatcttcaccgatagagaaaagccc
tccattatcttctcggccctcagcatgaggtacagcggacgtataaaatttggttactat
cggaaagggagcgccaagtgcatccattttaaaccggactcgaaaacccacctactgatc
tcgacgtccacgggcgtacagagatacggactgaggaaaggagaatttttaaactacgac
gccctaaacctgtatcttcataccctggtcccggagataaatgatgtcttcataatttcg
ttcgtcatagtgaacatgttctgctgcatggatctgtttctgacttcgggaggtctagcg
aaaatactcttatgcttcttctggcagttagccaagttaaacctgctgttcattttacta
tggcttcccttgcaatggacgtttcaactctcggtcattgcgccactctcgaatgtattc
tggtggtcgattcaagtcctgtgtcagacgggagtcgccggtcagctccgtcaggattgg
ttgctccattctcaacattggggaatcgtctgctgtctcttcggtctgtactgcttcgtc
tgcggctggtttgtgaagaaatgtcgccctcagtcacaggaggacaatctatcgagcgta
gactggatgcgactgatctttcaccaatggcacctctttatgatccggcccagaaatata
tggcagcaaggtgggccacagatctctaccagcctagaggaaggcctggatttattcctc
gagaggaccacgcccgacctttggctccaccccatcatcacgggagaatacgttcacaac
ctaccccagtggaagtacggaggctttaggaagtcacaagatgaaaagtactgtttcaag
catctctgtggtagttgtcaggaatcatggcagaaatttttctgtatgaagaccgaggca
gaccgacaggagagatttgagaaatcttgcgaggaaatacggcagatgtttacggaacga
caatccaagaaggagaaagccgagatccacggggctcaaggcataaaggacaaagaattt
tatgaagtgtttgaagatggtcacaacaaggaaaccaagattgtggaaatgcaacctaca
aaggggtcaaaggtcactgaaaatagtactaatttatccgaagagaagttttgcggagtg
tgtctggatctcatctgtcatatcgaggaaggggaaagtggaaaggcaatcgttgtgaag
gaaccagcaaatttacaccaccaggatgttggtcatggtatcacagcaacagatatctgg
tcggaggaaagcacccaggaagagaaccacacttcaggaaaccagtatgatgcgtggcca
gaagaaatgttgaaaagtttagaatgcgccatatgcctggaggggtacgtcctggggagt
cacctctgcggtctcccctgcggtcatgcatttcactttgactgcgtgaaagtctggctc
tgcgggggcaagcattgttgcccgacgtgtagatggccggcattcaagaagaagccgagt
aagttatcaaagtataaagagtaa
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