Apostichopus japonicus (Japanese sea cucumber): 139968007
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Entry
139968007 CDS
T10891
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ajj03036
]
139968007
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ajj00535
]
139968007
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
139968007
Meiosis-specific proteins
Cohesin complex and associated proteins
139968007
Proteoglycans [BR:
ajj00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
139968007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
139968007
NCBI-ProteinID:
XP_071828379
LinkDB
All DBs
Position
5:21116459..21149680
Genome browser
AA seq
1210 aa
AA seq
DB search
MYIKQCTIQGFRSYRDQTIIEPFSPKHNVVVGRNGSGKSNFFYAIQFVLSDEFNNLRPEQ
RQSLLHEGTGPRVISAFVEIVFDNSDNRIPIDKDEVVLRRVIGAKKDQYILDKKLVTKTD
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKSESNQILK
DTEAKREKIEDLLKYIEERLSTLEEEKEELKQYQKWDKMRRSLEYTIHNQELIDTRKKLE
DLANKRENSGEMTKHLRDAQEEASKRIKAINKDLREFKARIRTANEERDQLNNERQDLLK
KRAKMELYVKDLQEEVNGDIDAKGRIETKLEKLDSEISAKQHELEEVMPRYEELKKEEQN
CNHRLEQCEQRRAELFAKQGRGNQFTTREERDKWIKKELKSLQKSIKDKDEQINRLNEDI
TTDTKKNEELEARMAKLNIDIEQMKDTVEGSNRSHYELKKKKDELQNERNTLWRQENTIQ
QELATTKDELHKKEQNLRSMTGKAVLRGIDSIKQILDGFRKQGEQQDVITGYHGILIENF
QCASRFNTCVEVTAGSRLFYHIVNDDLISTKILSEMNRSKMPGEVTFMPLNRLEVRDQRY
PESPDALPMVSNLQYEKKFDKVFKHVFGKTLICRSIEVATQFSRTQDLDCVTLEGDQVSR
RGAITGGYYDTRKSRLELQSSIVELRERLTSQEQQYEELRDKLQKVEVEITSMMSDMQKI
ETKNRKNKNIYEKMRSDMRIMKGESNVIEKALGPKEKRVQSLLSNLEAMKGSARSLEDEL
GTDLLSQLSVQDQREVDRLNDEIKGLNLQNKKALNERIKLEGDKNKKENVLSGNLMRKRE
QMIQELSDISVEDRRQKLDNSSMELQTAETAIDSNKARMEDIESQIESLNREQQSKQVDL
EEWKGKEKEYCDKIGDDAKVLEKMTNKQSLLLKKKEECMRKIRELGSLPSDAFEKYTHLS
LKQLFKKLDQCNAELKKYSHVNKKALDQFINFSDQKEKLIKRKEESDKGHSSITDLMNVL
ELRKYEAIQFTFKQVSKYFSEVFSKLVPGGKATLVMKKGEDESEDLDGDSASVSSKSSQI
PLVEQFTGVGIKVSFTGKSGETREMQQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDS
ALDAQHRKAVADMIHELSDNAQFITTTFRPELLEACDKFYGVKFRNKVSHIDVITKEQAK
DFLEDDATHG
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacagtgcacaattcaaggtttccgaagctacagggatcagacaatcatc
gagcctttcagcccaaagcataatgttgttgtcggtcgaaatggctcaggcaagagtaat
ttcttttatgcgattcagttcgtgctcagcgacgaattcaataatctccgtcctgaacag
agacagtctttgcttcatgagggaacaggacctagggtgatttcagcctttgtggaaatc
gtatttgacaactcagataaccgcattccaatcgataaagatgaggtggttctccgaagg
gtcatcggggccaagaaagatcagtatatactggacaagaagttggtcacgaaaacagat
gtgatgaacctacttgaaagtgcagggttttccaggagtaacccttactacatagttaaa
caaggaaagattaatcagatggccaccgcaccagactcacaacggttgaaactgctgaga
gaagtggctggcacaagagtctacgatgaaagaaaatcagagagtaatcagatactcaaa
gacacagaggccaaaagggagaagattgaggatctgttgaagtatatcgaggagagactc
tcgaccctggaggaggaaaaggaagaactcaagcagtaccagaaatgggacaaaatgagg
aggtctttggagtacacaattcataaccaggaactgattgatacaaggaagaaattggaa
gatcttgcaaataaacgagaaaacagtggtgaaatgacaaaacatcttcgggacgcccag
gaggaggcttctaagcgtatcaaggcaatcaataaagacctgagggaattcaaggcgcgt
atccgtaccgccaacgaagagagggaccaactgaataacgaacggcaagacttgctcaag
aagagagcaaaaatggaattgtatgtcaaggacctccaggaagaagtcaatggagacatc
gatgccaagggtcgaattgaaaccaagctggagaaattggacagtgaaattagtgccaag
caacatgaattggaggaagtcatgccaaggtacgaagaactgaagaaggaggaacagaac
tgtaaccacagactggagcagtgcgagcaacgaagggcggaattatttgctaagcaggga
agaggcaaccagtttacaactcgagaggaaagagacaaatggatcaagaaagagctgaaa
tcgctccagaagtctatcaaagataaagacgaacagataaataggctgaatgaagacatc
accacagatacgaaaaaaaatgaagagctggaagccaggatggctaaactgaatatcgac
attgaacagatgaaggacactgtggaagggtcaaacaggagtcattacgaactgaagaaa
aagaaggacgaactgcaaaacgaaaggaacaccctttggagacaggagaacacaatccaa
caagagctggccacgacgaaggatgaactacacaagaaggaacaaaacttgagatcaatg
actggcaaggctgtgttacgtggcatcgacagtattaaacagatcctggacggtttccgc
aaacaaggagaacagcaggacgtcatcactggttaccatggcattctcattgaaaacttt
cagtgtgcctccaggtttaatacctgtgtggaggtcacggcggggagcaggctgttctac
cacatcgtgaacgatgacctgatcagtaccaagattctctccgagatgaaccgctccaag
atgccaggagaggtcactttcatgccactgaataggctagaagtcagggaccagcgatat
ccggaatcacctgatgctctgcctatggtgtcaaatcttcaatacgagaagaagtttgac
aaggtcttcaagcacgtgttcggaaagacactcatctgtcgcagcatcgaagtggccacg
cagttctcccgaacacaagatctcgactgtgtcaccctcgaaggcgatcaagtcagtcga
aggggtgccatcacgggcggatactacgacacgcgcaagtcccgtctggagttacagagc
agcatcgtggagctacgagagaggttgaccagccaagagcagcagtacgaggaactgcga
gataaactccagaaggtggaggtggaaatcaccagcatgatgagtgacatgcagaaaata
gaaacaaaaaatagaaaaaacaagaacatctacgagaaaatgcgaagtgacatgagaatc
atgaaaggagagagtaacgtgattgagaaggctctgggaccaaaggagaaacgagttcag
agcttgttatcaaacctggaagccatgaaggggagcgcaagatctctggaagatgaacta
ggaacggatttgctgtcccaactgagtgtgcaggaccagcgagaggtggaccgtctcaac
gacgaaatcaaaggattgaatcttcagaacaagaaggctctcaatgaaagaatcaagctg
gagggtgataagaacaagaaagagaatgtcctgtctggaaatctcatgaggaagcgagag
caaatgatacaggaactgtctgacatctctgtggaagatagacgacaaaaactggataac
agttcgatggagctacaaacagccgagaccgctatcgactcaaacaaagccagaatggaa
gatattgaaagtcagattgagagccttaatcgggaacaacagagcaagcaggtggacctc
gaagaatggaaaggcaaagagaaggaatactgcgacaaaattggagatgacgccaaagta
ttagagaaaatgacgaataagcagagcttacttctcaagaagaaagaagagtgcatgcgt
aagatcagagagttgggctcgcttcctagcgatgcctttgagaagtacacccacctgtcc
ctcaagcaactcttcaagaagctggaccagtgtaacgcagaactcaaaaagtacagccac
gtcaacaagaaagccttggaccagttcataaacttctcggatcagaaggagaagctgatc
aaacggaaggaagagtcggacaagggacattcgtcaattactgacttgatgaacgtttta
gaactccggaagtacgaggccatccagttcaccttcaagcaagtctctaagtatttttct
gaggtgttctcaaagctagttcccggtgggaaggcaaccctcgtgatgaagaagggagaa
gatgaatcggaagatttggatggtgattcggcgtcggtctcctcaaagtcttcccagata
cctctggtggaacagtttactggtgttggcataaaggtctcctttaccgggaagtcggga
gaaacaagagaaatgcaacaactctctggcggacaaaagtcgcttgtcgccctcactctg
atctttgccattcagaagtgtgaccctgccccgttttacctctttgacgaaatcgattca
gctttggacgctcaacacaggaaagctgtggctgacatgatccatgaattgtctgataat
gctcagttcatcacgaccactttcaggccagaacttctggaagcttgcgacaagttttac
ggagtcaaatttaggaataaggtcagtcatattgacgttatcactaaggaacaggcgaaa
gactttctggaagacgacgccactcacggctag
DBGET
integrated database retrieval system
