Apostichopus japonicus (Japanese sea cucumber): 139968043
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Entry
139968043 CDS
T10891
Name
(RefSeq) DNA polymerase nu-like
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
139968043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139968043
Enzymes [BR:
ajj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
139968043
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
139968043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
139968043
NCBI-ProteinID:
XP_071828448
LinkDB
All DBs
Position
5:22268214..22300446
Genome browser
AA seq
928 aa
AA seq
DB search
MSYVWKPVKDPPSPRCISQHSPDIQRVLRVIRSKRVNQKIACHSHLHSEDKLNQVDRDGI
KCEPDDAHPNRTKISSKLWQHDGSSPLVINPRTQQGRDGCSNAHHQNQVKPRIAGDLSSI
PLVHRTHLQDLMSSEQSQRDQVNLEDQEESKDGRVRDWVVTDSDSFHSGVLPHQECHKFK
GMQLVSRRKLELQSQLRSSGCSNIEKVMKKRSHPHDGNINKFQKRGTNCSLRSNENTCLQ
LPAQKFKNLIREDIHHLQSTKRLTNDREETGLNFRNMKNSRNVISVDGSRDQNRQELLAF
CVSAAEILLQFSYANGVTQLQEKTMKRLSLLNGPGTVDFILVAVHNLPEKESEEWTFLSI
PILRLSQTQKKWCQQFLRTIMSSDVRKICYDSQEVISVIITFCQADLFTVASRWICLDPR
VACWLLDPDNPPNNFSDVIAMVVDRKLPGENDEKRTKKKESSVTRIAAPESDFSELSKCM
RQLYHQLCGTNLWNLFLQVEMPLIPLLSGMELSGIKVDPQKFYYASTILKTRTSQLEQLA
YAKAGKVFQLNSHVQLRQVLFDDLKLDEALTGNQLERTTGQNLKSTSENVLTKLQDVHPL
PGIILEYRKMQKLKSTYVDGYIDFIRNSYIHCTWEQTAAVSGRLQSTNPNVQNIPKQPVS
LTIDVDGQDGIHRTLHIREPFVSRDGYSLISADFQSIELRLLAHYSDDDLLLGLFKDEEQ
TDIFIQMTSQWLGVSIDRVRDEDREKTKRIVYSIVYGAGSEKIAEILKVDKKTARSFTNS
FLDKFSGIKRFTQQCIAQCHRLGCVRSLLNRQRLIKNISSANISQRLHAERQAVNFVIQG
SAADLCKLAMLTTVREFAQRPHLKARLLIQIHDELLFEAPDHQITECKELISSAMESVSN
IPELGVNLKTTLPVSLSVGKDWGHLLKC
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtgtggaaaccagtgaaggatccgccttctcctagatgtatttcacagcat
tcaccagatatccaaagagtactccgagtgataagatcaaaacgtgtcaatcaaaaaata
gcttgtcacagccacttacattcagaagacaagctcaaccaagttgatagagatggcatt
aagtgtgaacctgatgatgctcatccaaatcgaacaaagattagttcaaaactatggcaa
catgatggtagttctccactagtcataaatcctagaactcaacaaggaagagatggttgt
agcaatgcacatcatcaaaatcaggttaaaccaagaattgctggagatttatcgtcaata
ccacttgtgcatcgaacccacttacaagacttgatgtcatcagaacaaagccagcgagac
caagtaaatttggaagatcaggaggaatctaaggatggtagagttcgtgattgggtagtc
acagacagtgactcatttcatagtggtgtgctaccccatcaggaatgtcacaaattcaag
gggatgcagcttgtttctcggcgaaagctcgaattgcaaagtcaattgcgatcttctgga
tgcagtaacatagaaaaagttatgaagaagagaagtcaccctcatgatggaaatattaac
aagtttcagaagagaggaactaattgcagccttcgaagcaatgaaaatacctgtttgcaa
ttgccagcacagaaattcaaaaacttgatcagagaggacattcatcatttgcaatcgaca
aagaggctaacaaatgacagagaagaaaccggcttaaattttcggaatatgaagaactcc
agaaatgtcatttctgttgatggtagccgtgaccaaaataggcaagaattgttagcattt
tgtgtgagtgctgcagagatactactgcagttctcgtatgctaatggtgtcacacagcta
caagaaaaaacgatgaaaagattgtcattactgaatggcccagggacggttgactttatc
ttggtagcagttcacaatttaccagagaaagaatcagaagaatggacttttctttccatt
ccaatattgagactatcacaaacacaaaaaaagtggtgccagcaatttttaaggacgatc
atgtcgagtgatgttcgcaagatatgttacgactctcaggaagtaatttcggtgatcatt
accttctgtcaagctgacttgtttacagttgccagcaggtggatctgtttagatcctagg
gttgcatgttggctgttagacccagacaaccctcccaacaatttctcagatgtcatagca
atggttgttgaccggaagctgcctggtgagaatgatgagaaaaggacaaagaaaaaagaa
tcaagtgtcacaaggattgcagcaccagagtcagatttcagtgagctgagtaagtgtatg
agacaactttaccatcagctctgtgggacaaatctttggaatcttttccttcaagtagag
atgcctttaattccattactatcaggcatggaactgagtggcattaaagttgatccacag
aaattctactatgcaagtacgatattgaagactcgtacttctcagctggagcagttagct
tatgccaaagctggaaaggtgtttcaactcaatagtcacgtccagttgcgacaggttcta
tttgatgatctgaagctagatgaagctttgacggggaaccagctagagagaacgacagga
cagaacttaaagtccacgtcagagaatgttctaaccaaactgcaagatgttcatccacta
ccagggattattctagagtacaggaagatgcaaaaattgaagtcaacctatgtggatggg
tacatagacttcatcagaaatagttatattcactgtacctgggaacaaactgctgctgtt
agtggccgcctacagtctacaaaccctaatgttcagaacattccgaagcaaccagtgtct
ctgaccatcgatgtggatggtcaagatggaatacaccgtactcttcacatcagggaaccg
tttgtgagtcgagatgggtattccttgatatctgcagacttccagtccatagaactgaga
ctactggcacattactctgatgatgatctcctcttaggattgtttaaagatgaagaacag
acggacatcttcatccagatgaccagccaatggcttggtgtatccattgatcgagtgaga
gatgaggatcgtgagaagactaaaaggatagtttattctatcgtatacggagcaggatct
gagaagatagcagaaatactgaaagttgataagaaaactgctagatccttcaccaacagc
tttctggataagttttctggcatcaaacgattcacacaacagtgcatagctcagtgccat
cgtctcggatgtgtgagaagtctcctcaatcgtcagagattaattaaaaacatcagctct
gccaatatatcccagagacttcacgcagagagacaggctgtcaactttgtcatccaaggt
tctgctgctgacctgtgtaaactagccatgctgactacagtaagagagtttgctcaacgt
ccacatctgaaagccagactcctgatacagattcatgatgagttactttttgaagcacct
gaccatcaaatcacagaatgtaaagagttgatatcatcagcgatggaatctgtctccaac
ataccagaacttggagttaatttgaagacaaccttgcctgtctcactaagtgtcggaaag
gattggggtcatctcctaaagtgctga
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