Apostichopus japonicus (Japanese sea cucumber): 139968740
Help
Entry
139968740 CDS
T10891
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00061
Fatty acid biosynthesis
ajj00071
Fatty acid degradation
ajj01100
Metabolic pathways
ajj01212
Fatty acid metabolism
ajj04146
Peroxisome
Module
ajj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
139968740
00071 Fatty acid degradation
139968740
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
139968740
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ajj01004
]
139968740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ajj04147
]
139968740
Enzymes [BR:
ajj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
139968740
Lipid biosynthesis proteins [BR:
ajj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
139968740
Exosome [BR:
ajj04147
]
Exosomal proteins
Exosomal proteins of breast milk
139968740
Exosomal proteins of breast cancer cells
139968740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
SAPS
Motif
Other DBs
NCBI-GeneID:
139968740
NCBI-ProteinID:
XP_071829174
LinkDB
All DBs
Position
6:4580541..4608786
Genome browser
AA seq
724 aa
AA seq
DB search
MVFHLSLLVTNSGAVAEWIKLVAVEAIGRFWVRSPAESFMDRVRQVISDHPHIAFGTAAA
VLFGTSMALSSSQEGAPSERRFDFSKQSIRLEGPEGIRVSAQNNIEKGEYYRVYDEYENL
YASFLAGEKKSEGGPCLGTKKQGSNVYEWKTYGQVRERALQFGSALIEKGFEASDDTFVG
IYSSNREEWAITDIACSAYNIISVPLYDTLGETSTKYIINLVKIPVVMCDNFKKVQRLLD
QKPDLDVLKLIIVAEETIPENIAAKATEVGVELVTFQQMTDLGKENLKDATPGKNQDLFT
VCFTSGTTGDPKGVMLTHGNQLCMAGSVNAVGVNIDKTDRHLSYLPLAHSFERTILWVTL
SCGAQFGFFSGDTRKLMEDVAHLKPTIFIVVPRVLNRIYDKVNSGVKEANVVKRTLFNWA
FSSKKAALLSTGIPTADTMWDRLVFKKLQMLLGGQVKLMLTGAAPVSGEVLTFMRVVFGV
TLIEGYGQTESTAGATTTIGGDANTGHVGPPLPCNMIKLVDVPEKDYFAKDDKGEVCFKG
SNVFKGYYKKPELTAEALDEDGWLHSGDIGQWLENGTLKIIDRKKHIFKLAQGEYVAPEK
LENIYVSCPLIAQIFCYGNSNQTFVVALVIPDEEELAKRASAKKWAGKFEELCADERVKT
EILSEIKTAGENAKLLGFEKVKSIHIVAELFSVENGLLTPSMKSKRPVIEKTFKEQLDNL
YNNN
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttcatctctcacttctggtcacgaattccggtgctgtggccgagtggataaag
ttggtggcagtggaagcaatcggtaggttctgggttcgatcccctgccgagtcatttatg
gatagagttcgtcaagtgatttcagatcatcctcatatagcattcggtactgcggcagcg
gttctctttggcacatcgatggcgctcagttcttcacaagaaggagctccttccgagcgg
aggttcgacttttcgaaacagtccatcagattagaaggacctgaaggtatccgtgtgtct
gctcagaacaacattgaaaagggagaatattacagagtttatgatgagtatgaaaatttg
tacgcatcctttctggctggagagaagaaatcagaaggtggaccatgtttgggaaccaag
aaacaaggaagtaatgtctacgaatggaaaacctacggtcaggtccgggagcgtgcctta
cagtttggttcggctctcatagagaaagggtttgaagcctcagatgacacttttgtggga
atttactcttccaaccgagaggagtgggccattacagacatcgcttgttctgcgtacaac
attatctctgttccgttgtacgatacactaggggagacatcgaccaagtacataattaat
ctcgtcaaaattcccgttgtcatgtgtgataacttcaagaaagttcagcgtcttctggat
caaaaaccggacttagatgttttgaaattgatcatcgttgccgaagaaacgataccggaa
aatatcgcagcgaaggctacagaagtcggtgttgaactggtgacgttccagcaaatgaca
gatcttgggaaggaaaacttgaaggatgccacgccgggtaaaaaccaagatttgtttacc
gtttgtttcacaagcggcaccacaggcgacccgaaaggagtgatgttgactcacggtaat
caactgtgcatggcagggtccgttaatgcggttggtgtcaacatcgacaaaacggacaga
catctatcgtatttaccactggcccactcattcgaacgaacaatactgtgggtaacgcta
tcttgtggtgcccagtttggtttcttcagcggcgataccaggaagttaatggaggacgtt
gctcatctcaaacccaccatcttcatcgtggtacctcgagtcctgaatcggatctatgac
aaagtaaattcaggcgtgaaagaagcaaacgttgtgaaaagaactttgtttaactgggct
ttcagcagtaagaaagcggcacttttaagtaccggtattcccaccgcggatactatgtgg
gacagacttgtgttcaagaagcttcagatgttactcggtggtcaggtcaaattaatgctg
acgggagctgcaccggtcagcggagaagtcctaacttttatgcgggttgtgtttggtgtc
acattaatagagggatacggacaaacggagagcactgctggggcaacaactaccattgga
ggagacgctaatacaggtcatgttggaccacctctgccctgcaacatgattaagttggtc
gatgtaccggaaaaagattattttgccaaagatgacaaaggagaggtttgtttcaaagga
tccaatgtattcaaaggttactacaagaaaccagagctaacagcagaagctttggacgag
gatgggtggctccactctggagacattggtcaatggttggagaacggtacgctgaagatc
atagacaggaagaaacacatttttaaacttgctcaaggcgagtatgtcgctcccgaaaaa
ctggaaaatatctacgtgtcttgtccgttgattgcccagatattctgctatggcaacagt
aaccagactttcgtcgttgccttggttattcccgacgaagaagaattagccaaacgagct
tcagcgaagaaatgggctggaaaatttgaagagctttgtgctgatgagagagtgaagact
gaaatactaagtgagattaagactgctggcgaaaacgcgaaactgcttggctttgaaaag
gtcaagagtattcacattgttgcggaactgtttagcgttgaaaatggattactcaccccc
agcatgaagagtaagagaccagtgatagagaaaactttcaaagaacaattggataatctc
tataataataattaa
DBGET
integrated database retrieval system
