Apostichopus japonicus (Japanese sea cucumber): 139968755
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Entry
139968755 CDS
T10891
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139968755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ajj04131
]
139968755
Membrane trafficking [BR:
ajj04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
139968755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Sec20
SseC
ZnuA
Exonuc_VII_L
DUF6097
Motif
Other DBs
NCBI-GeneID:
139968755
NCBI-ProteinID:
XP_071829211
LinkDB
All DBs
Position
6:complement(4992957..5007250)
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AA seq
218 aa
AA seq
DB search
MSAMEEFENQFGILSAEITSKINQVPNLSGAEKKNLCNLTERQIDEAKELLEQMELEVHS
MSQSDKQKYTTRVKSYKTELGRLEKDLKKAKLNFRDEAMREELFSLEDPRNSEDQRTRLL
DNTEKLERTSRKLDAGYRMAVESEQMGQDIMDNLHRDRDKIQRSRNRLKDTDAYLGQSSR
VLSAMMRRIIQNRFLLFIIAFVLLSVIILTFYFVFRGR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaatggaggaattcgaaaaccagtttggcattctgtcggcggaaataacgtcc
aaaatcaatcaagttcccaacctaagtggagctgaaaagaaaaatttatgcaacttaacc
gaaagacagatagatgaagccaaagaattgttggaacagatggagctggaagtacattct
atgagtcagtcagataaacaaaaatacaccaccagagtcaagagttataaaacagaactg
ggaagattagagaaggatttaaaaaaagccaaactcaacttccgagatgaggctatgaga
gaagagctgttcagcctagaagatccaagaaattcagaggaccagaggacgagacttttg
gataatacagagaagttggagaggacatcaaggaagctagatgccggttacagaatggca
gtagaatcagagcaaatgggtcaggatataatggacaaccttcacagagacagagataaa
atacaacggtcaaggaacaggttaaaggatacagatgcttatctaggtcagagctctaga
gtactgagtgcaatgatgaggagaatcatccagaaccgtttcctcctcttcataatcgct
ttcgtcctcctgagcgtgatcattcttacattttactttgtgttccggggacgatga
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