Apostichopus japonicus (Japanese sea cucumber): 139969086
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Entry
139969086 CDS
T10891
Name
(RefSeq) polycystin-2-like protein 1 isoform X1
KO
K04986
polycystin 2
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ajj03037
]
139969086
04040 Ion channels [BR:
ajj04040
]
139969086
Cilium and associated proteins [BR:
ajj03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139969086
Ion channels [BR:
ajj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139969086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
EF-hand_1
EF-hand_7
Fer4_24
EF-hand_6
DUF6693
Motif
Other DBs
NCBI-GeneID:
139969086
NCBI-ProteinID:
XP_071829950
LinkDB
All DBs
Position
6:complement(15068769..15109209)
Genome browser
AA seq
1118 aa
AA seq
DB search
MASSRNSRVSPSPRPGSSGTVLSREDELEMDKITNEDPSPRPVSSASRQAWNDNEGFDMA
SEEPDNYDEQDGSSDEDEDGDHAPTAMESEVYMGTDMKAMDLKTARAKEDHARAGLCRKI
MRGIRSLWRTRQTDDTAQDKELHVRTTLRELIIYIVFLIVLCIMTFGMTNSTMYYYTKVM
SELFLDSQFPDTKNTFRGMTTSLDFWRFAETPLMDGLYWETWYNNDNVTEDELGFIFYEN
KMLGVPRLRQVKVTNESCIVHTDFRDNIKQCYAFYSESLEDTSPYGLRNGTAWEYTTEEV
LDGSSHWGEIATYGGGGYYMDLGKRKQDSLKQILELKENLWIDRGTRAIFVDFTVYNANI
NLFCIVRLVVEFPPTGGAIPTSTFRTVKLLRYVTAMDYFIMACEGIFVLFILYYSVEEFL
EIKRHKFSYFKSTWNCLDVIIIAVSVVCMFFHVYRTFTVDKMIERLLSEPDMYADFEYLG
RWQSIFTNVTAVAVFLAWIKVFKYISFNKTMTQLSSTLSRCAKDVGGFTIMFLIIFFAYA
QLGYLIFGTQIKDFRSIMYCVYTLFRIVLGDFDFHELESANRVLGPIFFITYVFVVFFVL
LNMFLAIINDTYSEVKADIANQKSEFEISDYFKKGYDKMVGKLNFKRDKIADIQEALAHA
DANADQHLDFDEWRHELKCRGHADAEIEAVFAKYDVDGDRILDAEEQMKMAADLEGQKTE
LNNQLAELEEAQITTGNQPSTARSKSRVSFNDSIESDYDDDEGGKGGGRRGGAAVSYEEF
VVLSRRVDRMEHSIGSIVSKIDAVLVKLEAMERAKAQRRETMNKLLDSITEEREIKEVYK
SEMNRDSLPQMSRASTSASGYSDDEDDGEQKRKSKMENLVREEFERWGSDASLRGGRTSA
TSPRAGSAVRSRPTTSQSRLGDIREVSEPGTPGTKRGLSRSASQQSVQSIQSNKSGRKSS
VSQVAFELNEETEDDDPLVELEKTLSRAGSRTSMINAPDHPEASSSASRAASRAKSSASR
SSSVTSRRHSLGAVPAASGVTSPSSRTSRASSSVDTPVASTPPASPSRASAFSPRSDSAI
SGRTTVAESRASTVISRASTVASRASIEDDDNIDTSNV
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagtcgtaattccagagttagtccttctccccgaccggggagttcggggaca
gttctttcacgtgaagatgaactggagatggacaaaatcacaaatgaagatcccagtcct
agacctgttagttcagcatcacgtcaggcatggaatgacaacgaaggttttgacatggct
tcggaagaacctgataattatgacgaacaggatggttcctctgatgaagatgaagatggt
gaccatgcaccaactgccatggaaagtgaagtttacatgggaacggatatgaaagcaatg
gaccttaaaacagcccgggcgaaagaagaccacgcaagggcaggtttatgtcggaaaatt
atgcgagggatcaggtctttgtggcgaacaagacaaacagacgatacagctcaggacaaa
gaactccatgtccgtacaacgttgagggaactcatcatctacatcgtgttcctcatagtt
ctctgcattatgacttttggtatgacaaattcaaccatgtactattacaccaaagtgatg
tccgaactgtttttggacagccagttcccagatacgaagaacacattccgtggcatgacg
acctccttggatttctggaggtttgctgaaacacctctgatggatggcctgtactgggag
acgtggtacaacaacgacaatgtgaccgaagacgaactgggattcatcttttacgagaac
aaaatgctcggcgtcccgaggcttcgacaggtgaaagtgaccaacgagtcttgtatcgtg
cacacagactttcgagataacataaagcaatgctacgccttttactcagagagcctagag
gacacttcgccgtacgggttgcgaaatggaaccgcatgggaatataccaccgaagaggta
ttggacggttccagccactggggtgagatagcgacatacggcggagggggctactacatg
gacctgggcaagcggaagcaggactccctgaaacagatcctcgagttgaaggagaacctc
tggatcgacaggggaacgagagccatctttgtggacttcacggtctacaatgccaacatc
aacttgttctgtattgtccggttggtcgtggagtttccgccgactggtggcgccatccct
acgtcgacgttccggacggtcaagctactccggtacgtgaccgcgatggattacttcatc
atggcctgcgagggcatctttgtcctcttcatcctctattactcggtggaggagtttctg
gagataaagagacacaaattctcttacttcaagagcacttggaattgcttggatgtgatc
attattgctgtctccgtggtctgtatgttctttcacgtttaccggacgttcaccgtggac
aagatgatcgagcgtctgctgtctgaaccggacatgtacgctgacttcgagtacctcggg
cgatggcagagtatcttcaccaacgtcactgctgtggctgtctttttagcctggattaag
gttttcaagtacatcagcttcaacaagaccatgactcagctttcgtccaccctctcacgt
tgtgccaaagatgtcggtggcttcaccatcatgtttctcatcatcttctttgcctacgcc
cagctcgggtaccttatcttcggtactcagatcaaggacttccgcagcatcatgtactgc
gtttacaccctgttccgtatcgtcctgggagactttgacttccacgagttggaatcggct
aatcgtgtcttgggaccaatctttttcatcacctacgtgtttgtggtcttcttcgtgttg
ctgaacatgttcttggctatcatcaacgacacctacagtgaagtgaaggcagacatcgcc
aaccagaagagcgagtttgaaatctccgattacttcaagaagggctacgacaagatggtg
gggaagctcaacttcaagagggacaagatcgcggacatccaagaggccctggcccacgcc
gacgcgaacgccgaccaacatctggactttgacgaatggagacacgaactgaagtgccgt
ggtcacgcggatgcggagattgaagccgtctttgccaagtacgatgtggacggcgaccgt
atcctggatgcagaggaacagatgaagatggcagcggacttggagggacaaaagactgaa
ttgaataaccagctagcggaattggaagaggcccaaatcacgactggtaaccagccgtcg
accgcacggagcaagagtagggtcagcttcaacgacagcatcgagagcgactacgacgat
gacgagggcggcaaaggaggaggacggagggggggagccgccgtctcttacgaggagttt
gtcgtgctcagccgacgcgtggacaggatggagcattccatcggcagcatcgtgtccaag
atcgatgcggtcctggtgaagctcgaggcaatggagagggccaaggcacagaggcgagag
accatgaacaaactcttagatagtatcacagaggagagagagataaaagaggtttacaaa
agtgagatgaacagggattccctgcctcagatgtcaagagcctccacctcagcctctggg
tatagtgatgacgaggacgacggtgagcagaagaggaagagcaagatggagaacttggtc
cgggaagaattcgaacgttggggctcggatgcgtccctccgtggaggtcgaacaagcgcg
accagtcccagggcaggaagtgcggtgcgttcacgtccgaccacttcccagtcgagactc
ggggacatcagagaagtttcggagccgggaactcccgggaccaaacgtggcctgagccga
tctgcctcccaacagtcggttcagtcaatacagtccaacaagtcaggacgcaagagcagt
gtttcacaggtcgcctttgaattaaatgaggagactgaagatgacgaccctctggtagag
ctcgagaagaccctgtctcgcgccggctccaggacatcgatgataaacgccccagatcat
ccagaagcctcatcttctgcttcaagagccgcctcccgtgccaaatcctcggcctcccgg
tcctcgtcggtcacatctaggaggcactctttgggagctgtacccgctgcttccggagtg
acctcaccatcatcgaggacgtcaagagcatcgtccagtgtagacacccccgtggcttcc
actccccctgcatctccaagtagggcctctgccttcagtccaaggtcagattcggccatt
tccggtcggaccacggttgccgaatcgagagcaagcacagtcatctcccgtgcatcaacg
gtcgcatccagggccagtattgaggacgatgacaacattgacaccagcaacgtctaa
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