Apostichopus japonicus (Japanese sea cucumber): 139969167
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Entry
139969167 CDS
T10891
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139969167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajj03041
]
139969167
Spliceosome [BR:
ajj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
139969167
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
139969167
NCBI-ProteinID:
XP_071830110
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All DBs
Position
6:complement(17280647..17291867)
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AA seq
517 aa
AA seq
DB search
MSKRRDDKTRRSSKKRKVALVEEYDSDDEYEHVRDPQVDKSRSCPYLDTINRSVLDFDFE
KLCSVSLSHLNVYACLVCGKYFQGRGQKSHAYTHSVQINHRVFLNLHTLKFYCLPDNYQI
IDSSLEDITYVLKPTFTPELISQLNTNVKLFRAYDGTTYLPGIVGLNNIKANDYCNVLLH
AFVHVVALRDYFLEEQNYINIKLKPGIIIGLLAQRFGELNRKMWNPRNFKAHVSPHEMLQ
SVVLCSKKRFQITEQGDPVEFLAWFLNALHASLGGTKKRNSSVISQTFQGRMKVYSRKVI
PLDISEEEERKKLMQTEEFKETSVETPFLFLTLDIPPAPLFKDELEQNIIPQVPLSSLLS
KFDGVTEKEYKTYKDSTIKRFELTRLPPYLIICIKRFTKNTFFVEKNRTIVNFPVKNIDF
KDMLSSDPAVIAKHPHTTYDLMANVVHDGEPGSGKGTYRVHVLHQASQKWYEIQDLHVAD
VLPQLITLSEAYIQIWELKKDNNVQPSNAGDSTGKVK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgaagagatgataaaacaagaaggtctagcaagaagagaaaggtagcgctc
gttgaggagtatgacagcgacgatgaatatgaacatgtccgtgatcctcaagtcgataaa
agcagaagctgcccttacctggatactataaatagatctgttctggactttgactttgag
aagctctgctctgtttcactttcccatctgaatgtttatgcctgtttagtctgtggcaaa
tattttcaaggaaggggccaaaagtcccacgcttacactcacagcgtgcaaatcaaccat
cgtgtatttcttaaccttcacactctgaagttttattgcctgccggacaattaccagatc
atcgactcttcacttgaagacatcacttatgtactgaaaccaactttcacaccggagttg
atttcacaactgaacacaaacgtcaaacttttccgtgcttacgacggtacgacctatctc
ccaggtatcgtcggtctgaataacatcaaggccaatgactactgcaacgtacttcttcac
gcttttgttcatgtagtcgctcttagggattacttccttgaagaacaaaactacatcaac
atcaaactaaaacctggcatcatcatcggtctgttagcacagaggttcggcgagctcaat
cgtaagatgtggaatccccgaaacttcaaggcccacgtcagtccccacgagatgttacaa
tcggtggtgctgtgcagtaaaaaacgtttccagataacagagcaaggtgatccggtggag
tttctggcttggttcctcaacgccttgcacgcatccctgggaggcacaaagaagcggaac
agtagcgtgatcagtcaaacgtttcagggccggatgaaagtctactccaggaaagtgatc
ccgctggatatatcagaagaggaggagagaaagaagttaatgcagactgaagaatttaaa
gaaaccagtgtggagactccgtttctctttctcactttggacattcctccggctcccctc
tttaaggatgaactcgagcagaatatcatccctcaagttcctctgagtagcctgctttcc
aaatttgatggagtgacagaaaaagagtacaagacgtacaaagattcaacaatcaagaga
tttgaattgacaaggttacccccttatctcatcatctgcatcaaaagattcaccaaaaat
accttcttcgtcgagaaaaaccgcaccattgtcaacttccccgtcaaaaacatcgacttc
aaagatatgctgtcttccgatccagctgtgattgccaaacatcctcatacgacctatgac
ctcatggccaatgttgtgcatgatggggagcctggatctggcaagggaacatacagagtc
catgtacttcaccaggcctctcagaaatggtacgagatacaagaccttcacgtggctgac
gttcttccacagctgattaccctatcagaggcttacatccagatatgggagctgaagaaa
gataacaatgtacaaccatctaatgcgggtgacagcacaggaaaagtgaaataa
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