Apostichopus japonicus (Japanese sea cucumber): 139969388
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Entry
139969388 CDS
T10891
Name
(RefSeq) ATP-dependent DNA helicase Q1-like isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139969388
Enzymes [BR:
ajj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
139969388
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
139969388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
RQC
HEM4
Motif
Other DBs
NCBI-GeneID:
139969388
NCBI-ProteinID:
XP_071830399
LinkDB
All DBs
Position
7:13563357..13627328
Genome browser
AA seq
1025 aa
AA seq
DB search
MMEGFSLSLPEKKRKIGELKKNISAINLDLAEIHSKLDYLNKRKLILQKEKKEMESEATL
LERSCQLPDVDFKCSDFQWSQELHNLKTSMFGIESFRPYQEEVINATMSKHDVILIMPTG
GGKSLCFQLPALLSEGITLVVSPLVSLMEDQAMTLQDLGIAATLLSASTSRDHLKVVLQD
MVNPKAKLKLLYVTPEKIAKSKRFMAQLQKAYDKGMLSRIVIDEVHCCSQWGHDFRPDYK
VLGILKRQFPDSPILGLTATASTSVVYDVKSMLNIAGCDVIRSTYNRANLFYEVRFKPPG
NEFTSKLVELLKGEFANQSGIIYCFSRKDTENVAHELNSEGVRAAAYHAYIEPQARSMVH
KDWRNGRIKVVVATTAFGMGIDKPDVRFVVHHSLSKSMENYYQESGRAGRDNKPASCILY
FGFVDVFRQSTMVVMEQTGLAKLYEIVAYCSIRGRCRRASLAEHFDESCERGVECNNMCD
ACKTKSTAENVDLTDTVKTILRILNESDLKDQRLTGLKLLELAGKHKNQTGTRKLSKSTY
QDIILHLLLEGYLKEDFHFTPYSTISYICLGPRAHRVQSDSSAKVIIPMTNMISGGKGFQ
KREKPCTSKDVSKSINEDQFHGDGMVKCHSRSDNDNLMTSESKKEDVKRKTVTEGKNEVI
FLDDDDSDDGGCQVIMKKQTLVGKKVSKKTTKNASKLSKRVNRSQVKLPTSPNIHLRHRD
VMLPTNEKDPSKVMSPISKMKGLIGLQSESQCGETSLDDSVHQPKKGRLSNQGKDKMKSF
KTKGKLIQEEMRSKVKTKVTKEVAVFDLCDNDAHEHKKKQSAHLSSCKKLPKRHNISLKL
PRTDSSKMTNVIKSSKVKRKLDSYPLGDLSKRAKYSPKLSEGKSTLAMANLHNPPSNQSL
RTDLVGLLKSTGFNAGVTEGETSACHESDECNTGIKNDGHMKRKNVETMIEEENVSPKMS
LNKCDTVRVIDEADMQSASCYRSHGVSCDSSHNLSCDVNDESFHSSGSELDLTNVYMKQL
ASLNE
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggattttctctttctttaccggagaaaaagagaaaaataggagagctgaag
aaaaatatttcagctattaatttagatttggcagaaattcatagtaagctggactacttg
aataagagaaagctgatattacagaaggagaagaaagaaatggagtcagaagccactctt
ttggagcgatcttgtcagttaccagatgtagattttaaatgttcagattttcagtggtct
caggagcttcataatttgaagacttctatgtttggtattgaatcattccgaccttaccaa
gaggaagttatcaacgccactatgtcaaagcatgatgttattctgataatgccaactgga
ggaggaaagagtctctgcttccagcttccagcactcctttctgagggaattaccttagtt
gtttcaccattggtatctttaatggaggatcaagccatgacccttcaggatcttggcata
gcagccacgcttctctcagcatctacctcacgtgatcatctgaaagtggttcttcaggac
atggtaaatcctaaggccaaactcaaactcctatatgtgactccagagaaaattgccaag
agtaaacggtttatggcacaacttcaaaaagcttatgacaagggaatgctttccaggatt
gtcattgatgaggtccattgctgcagtcaatggggacatgactttagaccagattacaaa
gtacttggaatcctgaagcgtcagtttcctgatagtcccatccttggactaacagctaca
gcttctaccagtgtcgtgtatgatgttaaaagtatgctcaacattgccggttgtgatgtc
atcagatcaacatataatcgtgccaatctattctatgaggtgaggtttaaaccacctggt
aatgagtttactagtaaacttgtagaattgttgaaaggggagtttgctaatcaatcaggg
ataatctactgttttagtaggaaggacaccgagaatgtggcacatgagcttaacagtgaa
ggagttagggctgctgcttatcatgcatacatagagccacaagctaggagtatggttcat
aaagattggagaaatggtcgtataaaggtggtagtggctacaactgcatttggaatgggc
atagacaagccagatgtacggtttgttgtacatcattccttgagtaagtcaatggagaac
tattatcaagaaagtggcagagcaggacgtgataacaagccggctagttgcatcttatac
tttggttttgttgacgtcttcagacaaagtaccatggtggtaatggaacagacaggcttg
gcaaagctctatgaaattgttgcctactgcagtatacgtggaaggtgtcgacgggcttca
ctggctgagcattttgatgagtcctgcgagagaggtgttgagtgtaacaacatgtgtgat
gcctgcaagactaaatcaacagctgagaatgttgatttaacagacactgtaaagactatt
ttaaggattctaaatgagagtgacttaaaggaccagagactgacaggcctgaaattgttg
gagcttgccggaaaacacaagaaccagacaggcacaagaaaactaagcaaatcgacctac
caagacataattttgcatctgttactagagggctatctaaaagaagactttcatttcaca
ccgtatagtaccatcagctatatctgtcttggcccaagagcacaccgtgtccagtcagac
tcatctgctaaagtgataatcccgatgaccaacatgatatctggaggtaagggcttccag
aaaagagagaaaccatgtacttcaaaggatgttagtaaaagcatcaatgaagaccagttt
catggagatgggatggtcaaatgtcattccaggtcagacaatgacaatcttatgacaagt
gaaagtaaaaaggaagatgtcaaaaggaaaactgtaacagaaggaaagaatgaagttatc
ttcctggatgatgacgattccgatgatggaggatgtcaagtgattatgaaaaaacaaact
ctggttggtaagaaagtcagcaagaagacaacaaaaaatgccagtaaactgtcaaaaaga
gtcaatcggtcacaagtgaaattaccaacgagtccaaacattcatcttaggcatagagat
gtaatgttgcctacaaatgaaaaagatccatctaaagtgatgtcaccaatatcaaagatg
aaaggtttgattggattgcaatctgaatctcaatgtggtgaaacaagtctagatgattct
gtgcatcagccaaagaaaggcagactgagtaatcagggcaaagataaaatgaaaagtttt
aaaacaaaaggcaaactcatacaggaagagatgaggtcaaaagtgaaaacgaaagttacc
aaggaagtagctgtgtttgacctttgtgacaatgacgcacatgaacataagaagaagcaa
agcgcacacttgagtagttgcaagaaattaccaaagagacacaacatctcactgaagtta
ccaagaacagacagctccaaaatgacaaatgtgattaaatcctcgaaagtgaaaagaaaa
ttggacagttatccactgggcgatttatcaaagagagctaaatattctcctaagttgtcg
gagggaaagtctaccctagcgatggctaatttacataatcccccatcaaatcaaagctta
aggactgatttagtagggctgctgaagtctactggatttaatgcaggagtaactgaaggg
gaaacttcagcctgccatgaaagtgatgaatgtaataccggtattaagaacgatggacat
atgaaaagaaagaatgttgagaccatgattgaggaggaaaatgtttcacccaaaatgtct
ctaaataaatgtgacacagtgagagtaattgatgaagctgatatgcaaagtgcgtcatgt
tacagatcacatggtgtatcatgtgacagttcacacaatttatcatgtgatgtcaatgat
gagtcctttcattcctctggatcagaattggatcttaccaatgtatacatgaaacagcta
gcttcacttaatgaatga
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