Apostichopus japonicus (Japanese sea cucumber): 139969482
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Entry
139969482 CDS
T10891
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajj03021
]
139969482
Transcription machinery [BR:
ajj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
139969482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_8
TPR_19
TPR_12
TPR_CcmH_CycH
TPR_16
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
ANAPC3
TPR_Slam
TPR_9
ARM_TT21_4th
KshA_C
Motif
Other DBs
NCBI-GeneID:
139969482
NCBI-ProteinID:
XP_071830610
LinkDB
All DBs
Position
7:16144864..16169423
Genome browser
AA seq
1179 aa
AA seq
DB search
MASNAPKSIDIPLRDTDEVIELDVEQLPEGEEVLTILKQENAPLHTWLALGLEYYKQGKV
EDFVKIFASWQTDANLDYPGNEKDQMTALDTLAAYYVQQARKEKNKDTKKELFTQATLLY
TMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFNFVLNQSPNNIPALLGKACISFNKK
DYRAALAYYKKALRTNPNCPAAVRLGMGHCFLKLNKQEKAYLAFQRALELEPTCVGAIIG
LAILEINNNGAEGIRKGVQLLSKAYTIDSSNPMTLNHLANHFFFKKDFTKVQHLALHAFH
GTENETIQAESCYQLARALHVQEDYDQAFQYYYQSTQFASPTFVLAHFGLGQMYIHRRDT
ENASQCFEKVLKVQPNNYETMKILSSLYAESKDDAKQELAKDYLQKVVEQFPDDVEAWIE
LAQILEGFDVQGTLAAYGTATRILREKVEADVPPEILNNVGALHYRLGNMKEAQKYYEAS
LERSKTEAEHDETYYNAIAVTTSYNLARLCEARFMYDKAEKFYKDILKDHPNYVDCYLRI
GCMARDRGQIYEASDWFKDALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPTT
QNDAYSLLALGNVWLQTLYQPTRDKEKEKRHQDRALAMYRQVLRNDNRNLYAANGIGAIL
AMKGYIREARDVFSQVREATADMKDVWLNLAHIYVEQKQYISAIQMYENCIKKFYKYHDV
EILTYLGRAYFKAGHYKDCRQVLLKARRVAPHDTLVLFNLAVVLQRIAMQVLRDEKSNLK
TVTSAVEELKTAQKYFNYLSKSGDRMRFDLNQAAVEARQCNDLYSQAQYVIQRARAQDEE
EKALREKSLMEREKLRKQLEEEVAKKREASEKKSKELIERRAQFKEKTKNLLILPDMPHK
RVSKKGKRLAKDGEILSDSESEGEEGEGPKKKKRKQYDEEGGKKSRKRSKKRRDGDDEGK
QKKRKEKTPRRRQDEVEPKGKFKSRALLSSSESDSDEGKKEIAAKSHKEQLGTGTSRLQL
MDYDSDESDSDYGPDKQKEETEQSPVSASSSSSSSDEEVEESTQVKKKKRRTRIASDDSN
EDSEGGDGKTEEKDGGSDSDGGSKKAASPAESGEEDERASDGQQEKQVSDGESGGHRSAD
EEEASDKGEEKNAAESGEENNAVESGEDNNAVESGEESD
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaacgctcctaaatccatagacattccgcttcgagacacagatgaggtgatt
gagttggatgttgagcaattgccagaaggtgaagaagtcctcaccatcctaaagcaagaa
aatgctcccctacacacatggctggctcttggcctggagtactacaagcaaggtaaagtg
gaagactttgtgaagatctttgcatcctggcagacagatgcaaacttggactatcctgga
aatgaaaaagaccagatgacggccctggatacgttagcagcctattatgtacagcaggct
agaaaagagaagaacaaggataccaagaaagagctcttcacacaggctaccctgctgtat
accatggcagataaaattattatgtacgaccagaaccatttacttggaagagcctgtttt
tgcttactggagggggacaagatggaccaagctgatgctcagtttaattttgtcctgaat
caatcccccaataacatcccagctctccttgggaaagcctgcatctcattcaataagaaa
gactatcgagctgccttagcgtactacaagaaagccttacgaactaacccaaactgccca
gctgctgtccgactgggcatgggtcactgtttcctcaaactaaataaacaggagaaagcc
taccttgcattccagagagccttggagctagaaccgacatgtgtcggtgctatcatcggt
ctggccatcctagaaataaataacaacggtgctgaggggatcaggaaaggagtgcagttg
ctttcaaaggcttacacgatagattccagtaatcctatgactctaaaccatcttgcaaat
catttctttttcaagaaggattttaccaaagtccaacatttggccttacatgccttccat
ggaacagagaatgaaaccatacaggcagagagttgttaccaactagctagagcactgcat
gtgcaggaggactacgatcaagctttccagtattattaccaaagcacacaatttgcctct
cctactttcgtcctggctcactttggtttgggtcaaatgtacatacacagaagggacacc
gaaaatgccagccaatgttttgagaaggtgctcaaggtacagccaaataactatgagacg
atgaagatcttgagctccctctatgccgagtctaaagacgacgccaagcaagagttggcc
aaggactacctgcagaaggtggtggaacagttccctgatgacgtcgaagcttggatcgag
ctggcccagatattagaaggattcgatgtgcagggaacgcttgcagcatatggtacagct
accaggatcctgagagagaaagtggaggcggatgtcccaccggaaatattaaacaatgtt
ggcgctttacattacaggctgggaaacatgaaagaagctcagaaatattatgaagcctca
ttggaaaggtcaaagacagaagctgagcacgatgaaacctactacaatgccatagcagtg
acaacatcttacaatctagcaagactctgtgaagctaggttcatgtatgacaaggctgaa
aagttctacaaagacatcctcaaggatcatccaaattatgtagattgctatctcagaatc
ggttgtatggccagagacagaggccaaatttatgaagcctctgattggttcaaagatgct
cttcagatcaaccaggatcatcccgatgcatggagcttgatcggaaaccttcatctggcc
aaacaggagtggggtccagggcagaagaagtttgagaggatcctgaagcagccgactacc
cagaatgatgcctactctctgctggccctgggaaatgtctggttgcaaactctttatcag
ccgaccagagacaaagaaaaggaaaaacgacaccaggatcgtgccttggccatgtacaga
caggtgttacgtaatgataaccgaaacctctatgctgccaatggtattggagccattctg
gcaatgaagggttacatcagggaggcgagggatgttttctcccaggtccgtgaggctaca
gctgacatgaaggatgtctggttgaacctggctcatatctatgtggaacagaagcagtac
atcagcgctattcagatgtatgaaaactgcatcaagaagttttacaagtaccacgatgta
gagatattgacataccttggcagagcttacttcaaggctggtcattacaaagattgtaga
caggtcctgttgaaggcccgtcgggtagctcctcatgacaccttggttctcttcaacttg
gcggtggtacttcagcgtatcgccatgcaggtcctcagagacgagaaaagtaatttgaag
acagtcaccagtgctgtcgaggaattgaaaacggcccagaaatattttaattacctcagc
aaatctggtgatagaatgaggtttgatttaaaccaagcggcagtggaagcaagacaatgc
aatgacttgtacagtcaagcccagtatgtgattcaaagggcgagagcacaagatgaggag
gagaaggcccttcgagagaaatccctgatggagagagagaaactaaggaaacagctggaa
gaggaagtggcaaagaagagagaagcgagtgagaagaagagcaaagagttgattgaaaga
agagcacagtttaaagagaagacaaagaacctcttgattcttccagacatgcctcataag
agggtcagcaagaagggaaagaggctagcaaaagatggagagattctctcagattcagaa
tctgaaggagaagaaggagaaggaccaaagaagaaaaagaggaaacagtacgatgaagaa
ggaggaaagaaatcgagaaagaggagcaagaagaggagagatggtgatgacgaaggcaag
cagaagaagcgaaaagagaaaactccacgcagacgtcaagatgaagttgaaccaaagggt
aaattcaaatccagagcgttgctgtcctccagtgaatcagattctgatgaaggcaagaag
gagattgctgcaaagagtcataaagaacaattaggaactggaacttccaggttacagcta
atggattatgacagtgatgaaagtgacagtgattatggaccagataaacagaaggaggag
acagaacaatctcccgtctcagcgtcgtcatcatcatcatcgtcagatgaagaagtagaa
gagagtacacaggtcaagaagaagaagaggagaactcgtatagctagtgatgactcgaat
gaagactccgaagggggagatgggaagacagaggaaaaagatggtggatcagactcagat
gggggttctaagaaggcagcatctccagcagagagtggagaggaggatgagagggctagt
gatggacagcaggagaagcaggtctctgatggggaatctggaggtcataggtcagccgat
gaggaggaagcatctgataaaggtgaagagaagaatgctgctgaaagcggtgaagagaac
aacgctgtggaaagtggtgaagacaacaatgctgtggaaagcggtgaagaaagtgattga
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integrated database retrieval system
