Apostichopus japonicus (Japanese sea cucumber): 139969562
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Entry
139969562 CDS
T10891
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03420
Nucleotide excision repair
ajj04120
Ubiquitin mediated proteolysis
Brite
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
139969562
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
139969562
TCR (transcription coupled repair) factors
Cul4-CSA complex
139969562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139969562
NCBI-ProteinID:
XP_071830754
LinkDB
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Position
7:complement(18538810..18567285)
Genome browser
AA seq
1139 aa
AA seq
DB search
MAYNYVVTAHKPTAVTACVTGNFTSPDDLNLIIAKNTRLEIYLVTPEGLRPNKEVGLYGR
IDILQLFKPPDQEKCLLFVLTSRYDACILEFVKDGDSEEVITKAHGNVYDRIGRLSETGA
IGIIDPDCRVIGLRLYDGLFKVIPLERDNKVLKAFNIRLEELNVIDVAFLHGCQVPTIAF
VHQDSQGRHVKTYEVNLREKEFDKGPWKQDNVETEASMVIAVPQPFGGVLIIGQESITYH
KGDKYKAIAPPAIKQSTLVCHGRLDSNGSRYLLGDLAGRLFLLLLEKEESMDGQVTVKDL
KVELLGETSIAECLTYLDNGVIFIGSRKGDSQLVRLNTEADEKGSYVAMMESFTNLGPIL
DMCVVDLDRQGQGQLVTCSGAYKEGTLRIIRNGIGIHEHASIDLPGIKGIWPLKLNVDSG
IDDILVLSFVGQTRVLMLNGEEVEETELGGFDGNQQSFYCGNVCLKQLIQITSASVRLVS
TQTKLLVNEWLPPSGKNISVATCNQYQIVAAAGHDIYYLEIVDGEVKQISTMTMEHEVAC
IDVTSLTESGRADICAVGLWTDISARILRLPSLESAHVEMLGGEIIPRSVLLARFEGQPY
LLCALGDGSLFYFSLTLETGRLSERKRVILGTQPTVLKTFKSHATVNVFACSDRPTVIYS
SNHKLVFSNVNLKEVGYMCPLNSSGYPDSLALCNDTSLMIGTIDEIQKLHIRTIPLGEAP
SRITYQEETQTFGVLTMRTEVKDATGVSVPLHSSASTKAANITYSSNSKNVTGQVPGGDN
EFGEENEIHSLLVVDQHTFEVLHAYQFGPSEVATSLMSCKLGSDPNPYYVVGTAMVKLEE
PEPKQGRLYVLQYADGKLTEVAEKEIKGAPYSIVNFNGKVLTSINSVVRLYEWTADHELR
VECSHYNNILALYLKTKGDFIITGDLMRSISLLAYKPMEGELEEIARNYSPNWMTAVEIL
DDDTFLGAEHNSNLFVCQKDSAATTDDDRRNLAQVGQFHLGEFVNVFRHGSLVRGSIGES
SLSTQGSLLFGTADGTVGLMTQLTEDFYKFLLEVQNKLTKVIKSVGKIDHSFWRSFHTDK
KTEPMQNFIDGDLIESFLELNQDKMEEVSQGLQIDEGGMKRDATVNDLVKIVEELTRIH
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggcatacaactacgttgttacagctcataagcccaccgctgtaacagcatgcgtgaca
ggaaactttacatcccctgatgacttgaatctcatcatcgccaagaataccaggctcgag
atctacctggtgaccccggaaggactccgaccgaataaagaggttggcctgtacggaagg
atcgatattttgcaacttttcaagcctcccgatcaagagaaatgcctactgtttgtcctg
acctctcggtacgacgcctgcatcttggaatttgttaaggacggagacagcgaagaagtt
atcacaaaagcacatggcaatgtttatgaccggatcggtcggttgtcggagactggagcc
atcggtatcatagatccggactgccgggtgatcggtctgcggctttacgacggcttgttt
aaagtgatacctttagaaagagacaacaaagtgttgaaggccttcaatatcagattggaa
gaactgaacgtgattgacgttgcattccttcacggctgccaggttccaaccatagcattt
gtccaccaggattcacaaggaaggcacgttaagacttatgaagttaatctccgcgagaaa
gagtttgacaaaggtccgtggaagcaagacaatgtagaaacggaggctagtatggtgatc
gcggtacctcaaccgtttggaggtgtcttaatcatcggacaagaatcgatcacgtaccat
aaaggagacaaatataaggcaatagcgccccctgctattaagcaaagtactttggtgtgc
cacggccgcttggattcgaacgggtcgcggtatctgctcggtgacctcgccggacgatta
tttctgctgcttctggagaaggaagagagcatggacggtcaggttacggtcaaagacctg
aaagtggaattgttaggagagacgtccatcgctgagtgtttgacgtaccttgacaacgga
gttatattcatcgggtccaggaagggagattctcaactcgtccggttgaacacggaagca
gatgaaaaaggctcttacgtggcgatgatggagagttttacgaatctcggtccgatattg
gacatgtgcgtggttgacctggacagacaagggcaaggccagcttgtgacttgttccgga
gcgtacaaagaaggcaccctgagaatcatccgaaacggcatcgggattcacgaacatgcc
agcatcgatttgccgggaatcaaaggtatctggcctctcaaactgaacgtagactctgga
atcgacgatatcctcgtgctctcttttgtcggacagacaagagttttgatgttgaacgga
gaagaagtggaggagacggaactcgggggctttgacggcaatcagcagtctttttactgc
ggcaatgtttgcctcaagcagctcattcagatcacctcggcctcggtccgtctggtcagc
acgcagactaaactcctagtcaacgaatggctacctccgtccggcaaaaacatcagcgtg
gcgacctgcaatcagtaccagattgtagcagcggccggtcacgatatctactacctggag
atcgtcgatggggaagtcaagcagataagcaccatgacgatggagcatgaggttgcatgc
atcgacgtcacctctctgacagagtctggtagagctgatatctgtgccgttgggctctgg
accgacatctcggccaggatcttgaggctcccatctttggagagcgcccacgttgaaatg
ttgggaggagaaatcattccccgttcggtacttctggcgaggtttgaaggacaaccatat
ttactctgtgcccttggagacgggtctctcttttatttctccttaacgttagaaacaggt
cgtctttcggagagaaagagagtcattctcgggactcaacctaccgttctgaagacattc
aagtcgcacgcgaccgtcaacgtctttgcctgctcggacagacccacggtgatctactcc
agcaaccacaaactggtcttttccaacgtcaacctgaaagaagtaggctacatgtgtcct
ctcaactccagcggttatccagatagtctcgctctttgtaacgatacgtctctcatgatc
gggacgatcgacgaaattcagaaacttcatatccgcactatacccttgggtgaagcgccc
tctcggatcacctaccaagaggagacgcagacgtttggagtgttgacgatgagaactgaa
gtgaaggacgccacaggcgtatcggtgccccttcactccagcgctagtactaaagctgct
aacatcacctacagctccaacagtaaaaatgtcacaggacaggtacccggaggagacaac
gaattcggggaagaaaacgagattcattcgttactcgtcgtagaccagcacacgtttgaa
gtattacacgcttatcaatttggtccgagcgaagtagccactagtctcatgtcgtgcaag
ctcggctcggatccaaatccttactacgtggtggggacggcgatggtgaaactggaagaa
cccgaaccgaaacagggaaggctctacgtattgcaatatgcagatggtaaactcacagag
gtagccgagaaagagatcaaaggagctccttattctattgtaaactttaatggaaaagtt
ttaacatcaataaacagtgtagtccgtctctatgagtggacggctgaccacgagctgaga
gtagaatgcagccattacaacaacatcctggctctctatctcaagacaaaaggagacttt
atcatcacaggtgacctgatgaggtcgataagcctgctggcctacaaaccaatggaagga
gaactagaagagattgcaagaaactacagccctaactggatgacggctgtcgaaatcctc
gacgacgataccttcctcggggccgagcataacagcaatctgttcgtctgccagaaagac
agcgcagccacaacggatgacgacaggaggaacctagctcaggtgggacagttccatctc
ggagaattcgtcaacgtcttcagacacggctccctggtgagaggtagcataggagaaagc
agtctctccactcagggaagtctgctcttcggaaccgcagacggaactgtcggtctaatg
acccagctcacggaagatttctacaagttcctcctcgaagtgcagaacaaactcacgaag
gtcatcaaaagcgttggcaaaattgatcatagcttttggaggtcgttccacaccgacaag
aagacagagccgatgcagaacttcatcgacggcgatctcatcgaaagtttcctggagttg
aaccaagacaagatggaggaagtgtctcaaggactgcagatcgacgagggaggaatgaag
cgagatgcgaccgtaaacgaccttgtcaagattgtcgaagaactgaccagaatacattga
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integrated database retrieval system
