Apostichopus japonicus (Japanese sea cucumber): 139969625
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Entry
139969625 CDS
T10891
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139969625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139969625
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139969625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
139969625
NCBI-ProteinID:
XP_071830845
LinkDB
All DBs
Position
7:19329259..19341104
Genome browser
AA seq
476 aa
AA seq
DB search
MAAKRRAGSQLTQDNWEDDDEDEVAVVEMGVQIAEQSVLAKRKIKRAHRRLGNTDGGVKA
SPFGGFKGFASSNPSTSAAKPTLGSGFQVSSSKTLLGSGFQVTSSKPALSSTELFPKTTL
NPTSTHSSSENADAKAGGIMNTALNGSASSPSSQTNPKYCSKLRALNGAVNSWIQQHVAK
TPVCDLTPIFNDYRKHLTEIERKYGSSMKTSSATFGTNDDKTVTQRVAEEDDDNKEPKGN
VGTSQSEGVRFLPTGQSGSKAEPVAKPQSGLFGSGGSKLTFGGSNLTFGSSSVNFGNAGT
STGNAAGFSFTGATATQKKDQEEQKEANDDEDEPPKVEVKQVEEKDAIFSIRSKLYYKKD
GAYKERGVGMLHIKKLEKAGQLMLRADTSLGNIIFNISIPKGLPVERQGKNNVILMAPMN
PPADKLCPICKKKYPNPQTSNRCESDCSPEPTAILLRVKTGEDADRLKEELDKVKE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaaaggagagctggctctcagttaactcaagacaactgggaagatgatgat
gaagatgaagtagcagttgttgagatgggtgtacagattgcagaacaatccgttttggct
aagcggaagataaaacgagctcacaggaggctcggaaacactgacggtggtgtcaaagcg
agcccatttggaggatttaaaggatttgcttcttctaacccatcaacttctgcggctaaa
ccgaccctcggctcaggttttcaggtttccagctccaaaacactgttaggttcaggtttt
caagtgacaagctcgaaacctgcattatcaagtactgaattattcccgaaaacaacattg
aatccaaccagcacacattccagttcggaaaatgcggatgccaaagccggtgggattatg
aacactgccctcaacgggagtgcaagctcgcccagctcgcagaccaacccgaagtactgt
tccaagctgagggcattaaacggagctgttaactcctggatacagcaacacgtggctaag
acaccagtgtgtgatctcacccccatatttaacgactaccgcaaacatttgacagagata
gagaggaagtacggctccagcatgaagacttcctcggcaacattcggaacgaacgatgac
aaaaccgtaacgcagagggtcgccgaagaagacgacgacaataaagaaccgaaaggtaac
gtcggaacatcgcaatcggaaggagtcagattccttccgaccggccagtctggatcaaaa
gccgaaccagtcgcaaaaccgcagagcggtttgtttggcagcggaggtagtaaattaaca
ttcggagggagcaacttaacattcggttcttcgtcagtcaactttggtaatgcaggtacg
tccacaggtaacgctgctggtttttcattcactggagcgacagccactcaaaagaaggat
caagaagagcagaaggaagcaaacgacgatgaagacgaacccccaaaagtagaggtgaaa
caagtggaagaaaaagatgctatattttcgataaggtccaaactttactacaagaaggac
ggagcatataaggaaagaggtgtaggcatgctccacatcaagaagttggaaaaggccgga
caacttatgctgagagctgacactagtctaggtaacatcattttcaacatcagtataccc
aaaggtctgccagtcgagaggcagggtaaaaataatgtcatcctgatggcgcccatgaac
ccacccgccgacaagctctgtccgatctgcaagaagaaataccccaaccctcagaccagc
aacagatgcgagagcgattgttcgccagagcccacggccatcctcctcagggtcaagaca
ggagaggatgcggacagattgaaggaagaactagacaaagttaaagaatga
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