Apostichopus japonicus (Japanese sea cucumber): 139969858
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Entry
139969858 CDS
T10891
Name
(RefSeq) DNA topoisomerase 3-beta-1-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03440
Homologous recombination
ajj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139969858
03460 Fanconi anemia pathway
139969858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajj03032
]
139969858
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139969858
Enzymes [BR:
ajj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139969858
DNA replication proteins [BR:
ajj03032
]
Eukaryotic type
DNA Topoisomerases
139969858
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
139969858
FA (Fanconi anemia) pathway
139969858
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
EBNA2_Core
FoP_duplication
DUF4882
Motif
Other DBs
NCBI-GeneID:
139969858
NCBI-ProteinID:
XP_071831296
LinkDB
All DBs
Position
7:complement(25087806..25116784)
Genome browser
AA seq
865 aa
AA seq
DB search
MKTAFMVAEKPQLAQSLAKILSGGNLHSRKGFNGACSIHEYNGTFQGEPVKFKMTSVCGH
VMGLDFLPKYNSWDKVDPSELFGAPTAKKEANPNLKMPHFLTTEGRGSDYLILWLDCDKE
GENICFEVIDCVEPVMNRPRGREQFIFRAKFSAITDTDIRGAMNKLVEPNLNESLAVDAR
QELDLRIGCAFTRYQTKYFQGKYGDLDSTLISYGPCQTPTLGFCVERHDRIQTFKPEAYW
VVHVEVLNGGQSVTLDWGRQRIFDKDVAQLFLNLVKGQKEAVVTSVSSEEKKKQRPIALN
TVELMRVASASLGMSPHHAMQIAERLYTQGYISYPRTETTSYSQNFDFNNALRQQLGCPW
SSIVRDLLSEGINKPRKGSDEGDHPPITPMRPAREGELTGEAWRIYEYIAKHFIATISDD
CRYLQTTVKFIINGEHFSITGKKLISPGFTSLMTWQAITQEESVPDFTKGQAYPIDEARL
IEKQTCPPDYLTEAELITLMEKHGIGTDASIPVHIENICQRNYVKVGGGRRLVPTRLGIV
LVHGYHKIDPDLSLPTMRAAVEEQLNLIAVGKAQHSSVLQHALDIFKRKFDYFVEHIRSM
DELFEVSFSPLAESGKPLTRCGKCRRYMKYIAAKPSRLHCAHCEETFSLPQNGVIKLYKE
LKCPLDNFELIVWSSGPKGKNFPLCPYCYSHPPFSDMRSKLAGCNECTHPSCQHSLTNLG
VAQCFECEYGILVLDKTASPKWKLACNRCNIVVDVNDKAQKVSVAKETCKTCGASILNVD
FKKGKSPLEGEETAHSGCIFCDPVLSPLVSSKHAVTVTSRSGGRGRGGPRGRGRGRGRGR
GGRGGGEGGRGKPKDKMSQLDAYFV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgcctttatggtggccgaaaagccacaattagctcagtcactggctaaaatt
ctatctggaggcaaccttcattcgcggaaagggtttaacggagcttgttctatacatgag
tacaatggaacatttcagggagaacccgtgaaattcaagatgacatcagtttgtggacat
gtaatgggtttggatttcctcccaaagtacaatagttgggacaaagtggatccatctgaa
ctgtttggagctccaacagcaaaaaaggaagcaaacccaaacctgaaaatgccacatttt
ttgacaacggagggccgtggctcagattatctgatactctggcttgattgtgacaaggaa
ggtgaaaacatttgttttgaggtaattgactgtgtggagcctgtgatgaacagaccgagg
ggaagggaacagttcatattccgggcaaaatttagcgccattacagacaccgatatcaga
ggagccatgaataaattggttgaaccaaatttgaatgaatctttagcagtggacgcacga
caagaattggaccttcgaattggttgcgcatttacaagataccagaccaaatattttcag
ggtaaatatggagatttagacagtacattaatcagctacggaccttgtcagactcctact
ctggggttctgtgttgagaggcatgatcggattcaaacattcaaaccagaggcttactgg
gtcgttcatgttgaggtattaaacggtggtcagtccgtaacgcttgactggggacgacaa
agaatatttgacaaagatgtggcccagctgtttctgaatctggtgaaagggcagaaggaa
gcagtggtcacttctgtttcttctgaggagaaaaagaaacagcgccccattgcattaaat
accgtagagcttatgcgagttgcgagtgcttcgttaggaatgagtcctcaccacgctatg
cagattgctgaacggttgtacacccagggttacatcagctaccccaggacagaaacaaca
tcttactcgcaaaattttgacttcaataatgccttgagacagcaactgggttgcccatgg
tcatccatagttagagatttactcagtgaagggatcaataaacccagaaaagggtcagat
gaaggggatcatcctcccatcacacccatgagaccagccagggaaggggaactaacgggg
gaagcttggagaatctacgagtatatcgccaaacactttatagctacaatcagcgatgat
tgccgctatctccagacgaccgtgaagtttatcatcaacggggagcattttagtataact
ggcaagaagctcatcagccctggattcacctcgctcatgacgtggcaggccattacacag
gaggagagcgtaccagactttacaaagggtcaggcttaccctatcgatgaggctaggctg
atagagaaacagacatgccctccagattatctcacagaggcagaactgatcaccctgatg
gagaaacatggcatcggtacagacgcaagcataccagttcacatcgaaaatatctgtcag
agaaattatgtgaaggttggcggtgggagacggctggtccctacaagacttggcattgtc
ttggtgcatggttaccacaagatcgatccagacctttcactgccaaccatgcgagctgcc
gtagaagaacaactcaacctgattgccgtcggtaaagcgcaacatagctccgtccttcag
catgccttggacatcttcaaacggaaatttgactattttgtcgagcacatacggagcatg
gatgagttatttgaagtctcattctccccattagctgaatctgggaaacctcttacaaga
tgtggtaaatgcagaagatacatgaagtatatcgctgccaagccgtctcgtctgcactgt
gctcattgtgaggagacctttagtcttccccagaatggagtcatcaaactatacaaggaa
ctcaaatgtcctctcgataactttgaattaatagtttggtcttctggaccaaagggtaag
aattttcctctgtgtccatactgttatagtcacccaccgttctctgatatgaggtctaag
ttagcaggatgcaatgaatgtactcacccctcctgtcaacactcactcactaatctgggc
gtggcacagtgcttcgaatgcgaatatggtatcttggtattggacaagactgcttcaccc
aagtggaagctagcttgtaacaggtgcaacattgtggtagacgtaaatgataaagcacaa
aaggtttctgttgccaaggaaacatgtaagacatgtggagcatccatcttgaatgttgat
tttaagaagggaaagagtccactggagggtgaggagaccgctcactctggttgtattttc
tgtgatccggtcttatcaccgttagtgtcttcaaaacatgcagtcactgttacctccaga
tctggggggcgggggaggggtgggccaaggggaaggggtagaggtagagggagggggagg
ggtggtaggggaggaggagaaggtggaagaggcaaaccaaaggacaaaatgtcacagcta
gatgcatactttgtttga
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