Apostichopus japonicus (Japanese sea cucumber): 139970937
Help
Entry
139970937 CDS
T10891
Name
(RefSeq) thrombospondin-2-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04145
Phagosome
ajj04512
ECM-receptor interaction
ajj04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
ajj04131
]
Endocytosis
Phagocytosis
Opsonins
139970937
Exosome [BR:
ajj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139970937
Exosomal proteins of colorectal cancer cells
139970937
Exosomal proteins of bladder cancer cells
139970937
Glycosaminoglycan binding proteins [BR:
ajj00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139970937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139970937
NCBI-ProteinID:
XP_071833115
LinkDB
All DBs
Position
8:19453687..19520476
Genome browser
AA seq
1190 aa
AA seq
DB search
MRHYQILELTLVSYLLFVVPLVVASSTYNVLEEVGLSADVEGVKSAKGTRPNKPAWRIKT
RLKSEVTASEDSLNHLFIAMEMSDEITLVVTLKRDDKMKGTIFSIDKKDQSERLFGFSMN
RNHIPVLVFGGFDVEDQTLHDESIVFDDSPLADSDQKFHTFILTLKKTHDGGVMVTMKAD
CHAMRIRIIPRTLYVPLSNNYDKYVLRFGQGLSGPRAKTYGDFRGVVDETKFFFDKKYSK
VAKQYGCEADFADYSMSFSEDDSSDLSHPSQMGQFDSSNMLSSTSRSQCSCDSLNERVEL
LSTEVGNIYTKIKNNEIRATVAPTVEYPTMFGCFFDNMFRDIGESWTIGNCTSCSCEPNG
DFTPSVRCNSIQCQPIDCGNPIPVPGECCPVCPANDEDIGWSDWSIWTPCSATCGGGEQA
RGRTCDRTHFACDGPDVQTRPCNNQPCIKVLDGGFSSWTPWTCSVTCGNGTETRIRACNS
PRPLNGGRPCEGARRDQRICVRTPCAVDGKWGMYSLWSACTKSCDGGWRERSRQCDNPPP
SHGGVNCTGPTVQREMCNTQPCPVDACLSSPCFYGVECRSHPEGTYECGSCPTGYVGDGR
FCNDVNECHEVSDACFNSRGKHLCRNLIPGYQCLPCPVNYRGNQPSGVGVRHAAKYKQQC
IPIDPCSEGTHTCHEHARCLFFGPYSDPRYTCRCTIGFAGDGFICGGDSDLDGWPDEDMP
CQDRGGHIHCTGDNCPSIPNSGQEDTDNDGLGDACDNDDDNDGISDGLYPNGPDNCPLHS
NPSQFDGDGDKVGNACDNCDNIENGNQDDIDGDGKGDACDEDMDDDGFINEEDNCPLVDN
ANQIDWDEDGLGDLCDNCPTIANPDQYDSDADGVGDECDTNRDIDGDGQQDDLDNCPYEP
NSSQMDRDNDNIGDACDNDDDNDGILDIDDNCRLVFNPDQNDTNVNGKGDACEYDFDGDG
VPDPNDACPANVDIWRTDLSHFRTTILDPLGTEQYDPHWIVRNNGMELVQTRNSDPGMAT
GYDSFDSVQFSGTFYVNTAQDDDYAGFVFGYQSNHRFYVLMWKQISQMYWITDPSQAMAK
AGLQLKLVNSTTGPGSYLRNALWHTGDTEDEVTLLWRDQKEIGWSPFKAYRWQVQHRVPE
GTIRVTMSDGSRKIVDSGLIYDDTLQGGQVGLFCFSQQMVFFSDLDYKCL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgagacactaccagatcctggagcttactcttgtctcttatttactcttcgtagtcccg
ctcgtagttgcatcaagtacgtacaatgtcttggaagaggttggcctatcagcagatgta
gaaggtgtcaagtccgccaaggggaccaggccaaacaaaccagcatggaggataaagacc
aggttgaagtcagaagtgactgccagtgaggattctcttaaccatctctttatagctatg
gaaatgagtgatgagatcacattggtcgtcacgctgaaacgagatgacaaaatgaaggga
actatcttttctattgacaaaaaggatcaaagcgaaagactttttgggttttccatgaac
agaaatcatatccctgtgttagtatttggtggtttcgatgtagaagatcaaacgttacat
gatgaaagtatagtgttcgacgattcgccactagcagattcagaccaaaaatttcatact
ttcattttgacattgaaaaagactcacgatggcggtgttatggtgaccatgaaggcggac
tgtcacgccatgagaatcagaataataccgaggactttgtacgtaccactctcgaataac
tacgacaaatacgtactgcgttttggacaggggctaagtgggcctagagccaagacatat
ggtgactttaggggtgttgttgacgaaactaagtttttctttgacaagaaatactccaaa
gtagccaaacaatacggatgtgaggcggattttgctgattatagcatgtcgttttcagag
gatgatagcagtgacttaagtcatcctagccagatgggacaattcgattcaagtaacatg
ttgtcttctacatcccggtcacagtgttcatgtgattcgttgaacgagagggttgaatta
ctcagtacagaagtgggaaatatttacacgaaaattaaaaacaacgaaattagggctacg
gtagcccctactgtagagtatcccacaatgtttgggtgtttctttgacaacatgttccgt
gatattggagagagttggactattggcaattgcacttcctgctcttgcgagccaaatggt
gactttactccatcggttcgatgtaatagcattcagtgccaaccgattgattgcggtaac
ccgatcccggttccaggggaatgctgtccggtttgcccagccaacgatgaagacataggc
tggagtgattggtcaatttggacgccttgcagtgctacctgtggcggtggagaacaggca
cgtggccgaacatgtgaccgaacacattttgcttgtgatggaccagacgttcaaaccaga
ccgtgtaacaatcaaccttgcataaaggttcttgatggaggatttagtagctggacacca
tggacatgcagtgttacttgcggtaatgggacagaaaccagaattagggcatgtaactcc
cctcgacccctcaatggaggacgcccctgcgagggagcacgtcgggaccagagaatatgt
gttaggacaccctgcgcagttgatggtaagtggggcatgtactcactctggtctgcctgc
accaagtcgtgtgatggaggatggcgggagagaagcaggcagtgtgataacccaccccca
agtcacggaggagttaattgtacaggtccgactgtacagagagaaatgtgtaacactcag
ccgtgtcctgtcgatgcctgtctttcaagtccctgtttctatggcgtagaatgccgcagt
catcccgagggtacatatgagtgtggatcttgtcctaccggttacgttggagatggaaga
ttctgtaacgacgtcaatgaatgtcatgaggtgtctgatgcctgtttcaattctcgtggc
aaacacctctgcaggaacttaattcccgggtaccagtgtttgccttgcccggtaaattat
cgcggaaaccaaccgtctggtgtcggtgtaagacatgccgctaagtacaaacagcaatgt
atacctattgacccttgttcggaaggcacccacacctgtcacgaacacgccagatgttta
ttctttggcccatacagtgacccaagatatacgtgtaggtgtactattggcttcgctggc
gatggtttcatctgtggtggtgacagcgacctggacggatggccagatgaagatatgcct
tgccaagatcgaggtggtcatattcattgtacaggggacaattgcccaagtattcccaat
tctggacaagaggacaccgacaatgacggtttgggagatgcatgtgacaatgacgatgat
aacgacggaatctctgatggcctgtatccaaatggaccagataattgtccactccattcc
aacccgtcacaatttgacggcgatggtgataaggttggcaatgcctgcgataactgtgac
aatattgagaatggaaaccaggatgatatcgacggcgatggcaaaggagatgcctgtgat
gaggacatggatgatgacggtttcataaatgaagaggataattgtcctcttgttgataat
gcgaatcagatcgattgggatgaggatggtcttggtgacctctgtgacaactgcccaacc
attgctaacccagaccagtacgactctgatgcagatggtgtgggtgatgaatgtgacact
aacagggacatagatggcgacggtcaacaggatgacctagataattgtccctacgaaccc
aatagcagtcagatggacagggataacgataatatcggtgacgcgtgtgacaatgatgat
gacaatgatggtatcttagatatcgatgataactgtcgattagtattcaacccagaccaa
aatgacaccaacgtgaatggcaaaggtgacgcgtgtgagtacgattttgacggtgacggc
gtacccgatccaaacgacgcatgcccagcaaacgtcgatatctggagaacagatctctct
catttcaggaccaccatccttgatccattgggtacagagcaatatgatcctcactggatc
gtcaggaacaacggcatggaacttgtacagaccaggaattctgatccgggaatggcaacg
ggttacgacagtttcgactctgtacagttcagtggtacattctacgtcaacactgctcag
gacgatgattacgccgggttcgtgttcggatatcaatccaatcaccgtttttatgtcttg
atgtggaaacagatatcgcagatgtattggataacagatccatctcaagccatggctaaa
gctggtcttcaactcaagttggttaattccacgacaggacccggttcatacttgaggaat
gcgctgtggcacacgggcgatacagaggatgaagtcacgttactctggcgggatcaaaaa
gaaattggatggagccctttcaaagcctacagatggcaggtacaacatagagttccagag
ggaacaattagagtaacaatgagtgatggtagtaggaaaatagtagattcaggacttatc
tacgatgacactctacagggtggtcaagttggactgttctgtttctcgcaacaaatggta
ttcttttccgatttggactacaaatgcttatag
DBGET
integrated database retrieval system
