Apostichopus japonicus (Japanese sea cucumber): 139971228
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Entry
139971228 CDS
T10891
Name
(RefSeq) poly [ADP-ribose] polymerase 1-like
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
139971228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajj03032
]
139971228
03036 Chromosome and associated proteins [BR:
ajj03036
]
139971228
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139971228
Enzymes [BR:
ajj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
139971228
DNA replication proteins [BR:
ajj03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
139971228
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
139971228
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
139971228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
WGR
PADR1_N
Zn_ribbon_PADR1
BRCT
BRCT_2
PTCB-BRCT
GvpK
GCN5L1
Motif
Other DBs
NCBI-GeneID:
139971228
NCBI-ProteinID:
XP_071833608
LinkDB
All DBs
Position
8:complement(8289728..8347794)
Genome browser
AA seq
1007 aa
AA seq
DB search
MSEIEYPFMAEYAKSNRSSCKKCKTQISKESLRLARMIQSPHFDGKMPNWYHFSCFWTIC
RASAVNEIGGVDGLRWEDQQKIKDKISGKDDATSSKKGKKEDGSGEPKIHMLSDFAVEYA
KSNRSKCKACDEKIVKDTVRVSKRDLAAAVAKGIPGPLDMWHHVDCFCKEDRLKELAWPS
MGVASAIPGFDKLKDEDQKELQKKLGKRKSSAKDEGPAPKKAKAESKPKKPVLSKEETAM
KVQSEFLWKIRDELYKNVANKDLKNLLTANNQDLPTGEAKLLDRVADGMAFGALERCLEC
KDGQLVASSTGVGYRCTGNLSGWTKCQNVTREAKRTTWIIPKAYSDNEYLGSFKFKPYNK
GVRVFPPETEVAGSSSQSKESREKKVLEGCKIVVQGKLNKTKQQLKTEIESLGGSVVATV
TPSVACVISNEAEVEKMTKKIKDAKKCDVHVVSEEFLQSVKTGGAALQITEHSICDWGSD
PHNRIAETTVDGVRKSATTKRLEDAYVKSAPKSMKMTIKGGGAVDPDSGLASICHILKSQ
GVMFAATLGMVDISRGSNSFYLLQLLKSDKSESYYVFRKWGRVGTTIGGNKLEKFGNDVT
DAKNHFKDLYLEKTGNKFGTKNFVKRPHKFYPLDIDYGEEEEQLKKAQKDSGSSSKLAKP
IQDLIKLIFDIEQLKKTMMEFEIDMEKMPLGKLSKKQIEKAYSVLTELQQLIKDGGKKTQ
ILDASNRFYTLIPHNFGLRSIPLLDSLELIKTKTEMLDNLLEIEVAYSLLKTDSGDGSKD
PLDSHYENLKCHLEVLDKKSKEFDMIRKFTKNSHAATHSTYSLEVEEVFKMDRSGEAARY
KPFKKLHNRRLLWHGSRVTNFAGIISQGLRIAPPEAPVTGYMFGKGVYFADMVSKSANYC
HTSYNSPTGLMLLCEVALGDMYELTGAEMITKLPAGKHSTFGMGRTAPAASGDIDVDGVT
VQLGVGAGTKVKNSNLLYNEFIVYDVAQIRMSYLIKMKFKYKTGSLW
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagatagaatacccgttcatggctgaatatgccaaaagtaatcgatcgtcgtgc
aagaaatgtaaaacgcagatttctaaagagtcattgcgtctcgctcggatgatccagtcg
cctcattttgatggaaagatgccaaactggtatcacttcagttgcttctggaccatttgt
cgtgcctcagctgtcaatgaaattggcggcgtcgatggtcttcgttgggaggaccaacag
aagattaaagataagatcagtgggaaggatgatgcaactagttcaaagaagggaaagaaa
gaagatggatcgggggaaccgaagattcacatgttgtcagactttgccgtggagtacgct
aaatcaaaccgtagcaagtgcaaggcgtgtgatgagaagattgtaaaggacactgtcaga
gtctcaaagcgagatcttgcagctgctgttgccaaggggatccctgggccattggacatg
tggcaccacgttgattgcttctgcaaggaagaccgactcaaggagctcgcttggccctca
atgggtgttgcaagtgccattcctgggtttgataagctgaaagatgaagaccagaaagaa
cttcagaagaagctaggaaagagaaaatcgagcgccaaagatgaaggaccagctccgaag
aaggcgaaagccgagagtaaacccaaaaaacctgtccttagcaaagaggagaccgctatg
aaggtccagagtgaatttctctggaaaatccgggatgaactctacaagaatgtggcaaac
aaggacttgaagaacttactgactgcaaataaccaagatttacccactggggaagccaag
cttctggatcgtgttgccgatggaatggcatttggagctctggaaagatgcttggagtgt
aaagatggtcaactcgtagcgagcagtacaggcgttggctatcgatgcacaggaaacttg
tcggggtggacaaaatgtcaaaatgtcactcgtgaggccaaaagaactacatggattatt
ccaaaagcgtactcagataatgaatatcttggatcgtttaaattcaaaccctacaacaaa
ggagtaagagtgttcccacctgaaactgaagtcgctggttcctcatcacagtccaaggaa
agtcgtgagaagaaggtgctcgaaggctgtaagattgttgtgcaggggaaactcaacaag
accaaacaacaactcaaaactgaaatagaatctttgggtggatcagttgttgctacagta
accccgtcggtcgcatgcgtcatcagtaacgaagctgaagttgagaagatgacaaagaag
ataaaagatgccaagaaatgtgacgttcacgttgtttctgaggagtttcttcaatctgtg
aaaactgggggcgctgcactacaaataacagaacatagcatctgtgactggggctctgat
ccgcacaacagaattgcggagacaactgtggatggtgtccgtaaatcggccacgacgaaa
agattggaggatgcatatgtaaaaagtgcacccaagtcaatgaagatgaccatcaaaggt
gggggcgctgttgatcctgactcggggttggcttccatttgtcatattttaaaatctcag
ggggtcatgtttgctgctaccctgggaatggtagacatcagcagaggtagcaactctttc
tacctgctacagctgttgaagagcgacaaatcagagagttattacgtcttcaggaagtgg
gggcgagtaggtacgacgatcggaggtaataaactagagaagttcggcaatgatgtcact
gatgccaaaaaccacttcaaggacttgtatctcgagaagactggcaacaaatttggaaca
aagaactttgtgaagagacctcataagttttacccgcttgatatcgactatggagaggag
gaagagcagctgaagaaagcacaaaaagactccgggtccagctccaaactagccaaaccg
attcaggacctgataaaactcatctttgacatcgaacagttaaagaagaccatgatggaa
tttgagattgacatggagaagatgcctcttgggaaactatcgaaaaagcagatcgagaaa
gcctattcagtgttgactgagctgcaacagctgatcaaagatggaggcaaaaaaactcag
atcctggatgcatctaacagattctacactctgattcctcataactttggtttgcgatca
attccactactggacagcttggaactcatcaagacgaagacagaaatgttggacaacctc
ttggagattgaggtagcatacagcttattgaaaacagacagcggagatggaagtaaggat
ccgctggacagccattacgagaacctcaaatgccacctggaggtcctggacaagaaatca
aaagagtttgatatgattcgtaaattcaccaagaattctcatgcagcgactcacagcact
tatagcttggaggttgaagaggtcttcaagatggatcgtagtggagaagcagctcgttac
aagccgttcaagaaactccataaccgtcgtctactctggcacggttccagagtcactaac
tttgcaggtatcatctcacaaggtctgcgcatagcgcccccggaagctccagtgaccggc
tacatgttcggtaaaggagtttactttgccgatatggtgtctaagagtgcaaactattgc
cacaccagttacaacagtccaacagggctgatgcttctctgtgaagtcgctctgggtgat
atgtacgagctaactggagctgagatgatcaccaaactaccggctggaaaacatagcacc
tttggaatgggaagaacagctccagcagcatctggtgacatcgatgtggatggagtgacc
gttcagctgggagttggagcggggaccaaagtgaaaaacagcaatctactctataacgaa
ttcattgtgtacgatgttgcccaaatcagaatgagttacttgatcaaaatgaagttcaag
tacaagactggaagtctgtggtag
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integrated database retrieval system
