Apostichopus japonicus (Japanese sea cucumber): 139971244
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Entry
139971244 CDS
T10891
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajj03021
]
139971244
Transcription machinery [BR:
ajj03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
139971244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_Ribbon_Prim
BRF2-like_C_cyclin_rpt
RB_B
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
139971244
NCBI-ProteinID:
XP_071833643
LinkDB
All DBs
Position
8:complement(24866520..24900263)
Genome browser
AA seq
723 aa
AA seq
DB search
MSKATVCPNCGGSDIDNDQSRGNAVCVSCGSVIEDNFIVSEVNFQENSLGGTSVIGQFVS
SEGKTGSSLGGNFRTGVGKESRMITLQRGKDRITHIGNQLNLNNHCLAIAYNFFKMAVQK
KLTRGRKTDHIVAACLYLACRVECTPHMLLDLSDLLQVNVYVLGKTYVRLLHELHINVPA
IDPCLYIQRFSHKLEFGEKTHVVSMTALRLVSRMKRDWMHTGRRPSGLCGAALLVSARLH
NFNRTQRQIIKVVKVCDATLRKRLTEFEETPSGQLTVDEFNKIDLEEEQDPPSFTKARRN
AKIAQLEELSRKQMSDLTGEVSTVQIAIEKALLHRRKQKDDDQNSLSSLSTLDESEQDAI
LDDLDENDILTQTIQEEENNIIIANSPVAGPSSRNSVDEPEAEKEESQEDISDSLSNEGN
IATNVTPPRKDDVLDELLMPPPWSPNSSRTPQLGLRPSPLSLGLKETIEECMKVPEENVT
SKQVEDESGELDLTGIDDADLDKFILSEKEVEVKTKIWMMENAEYYKQMKKREEVEERER
ENQAKQDQKKNKRKPKRKPQETANTAGEAIEKLLKEKKISSKINYDVLKNLEKPTTDVVR
PTAEATPPLDPTPLKRETVISPGIKAERVISTGIKAERESTKRAITEVIEEDGPPRKRKV
SAKPSMPSVGEPSPVVAPDIPQEVVVETGPVEQHEEGDDDDVGDYFPEDEDDMDDYQEGY
DTD
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagcaactgtttgccccaactgtggtggtagtgacattgacaatgaccagtca
aggggtaatgctgtctgtgtcagttgtggttcagtcattgaagataacttcatagtatct
gaagtcaacttccaagaaaacagtcttggtggaacatctgtcattggacaatttgtttct
tcagaaggtaagactggaagtagtttaggtggcaatttcaggactggtgttggaaaagaa
tcacgaatgattactcttcagagaggcaaggacagaatcacacacatcggtaaccagctt
aacctcaacaaccactgtctggcgattgcgtataatttcttcaagatggcagtacagaag
aagttgacgcgagggagaaagacggaccacattgtagctgcttgcttgtatctggcctgc
agggttgagtgtactcctcatatgctactggaccttagtgatcttttacaggtcaatgtt
tacgtccttggcaagacatacgtgaggcttttacatgaactccacatcaacgtaccagca
atcgatccatgtttatacatacaaaggttttctcacaaattagagtttggagagaagacc
cacgtggtatccatgacagctctccgtctggtctctaggatgaagagagactggatgcac
acgggtagaagaccgtcaggactctgtggggctgctttgctggtgtcagcgagacttcac
aactttaaccgcactcagaggcaaatcatcaaagtagtaaaagtttgtgacgcgacactg
aggaaaagattgacagaatttgaggagactccctctggtcaattaactgtagatgaattt
aacaagattgatctcgaggaagaacaagaccctccatccttcaccaaggctagaagaaat
gccaagatagcacagttggaagagctcagcagaaagcaaatgtctgacttgactggggaa
gtatcgacagttcaaattgcgatagagaaagcattactgcacagaagaaagcaaaaggat
gatgatcaaaatagcctctcgtctctcagcaccctggatgaatcggaacaagatgcgatt
ttggatgatttggacgaaaatgatattttaactcaaacaatacaagaggaagaaaacaat
atcataattgcaaactctcccgtcgcaggaccttcctctcggaatagcgtcgacgaacca
gaggcagaaaaggaagaatcacaggaagatataagtgactctttatcaaatgaagggaac
atagccacaaatgtaacaccccccagaaaggatgatgtgttagatgaattattaatgccc
cctccatggtcccctaatagcagcaggacaccacagctgggccttagaccatcaccattg
tcactgggcctgaaagaaactattgaagaatgcatgaaggttccagaagaaaatgtgaca
agtaagcaagttgaagatgaatctggtgaactggatttaaccggcatagatgacgctgat
cttgataagttcattttgagtgagaaggaggttgaagtaaagacaaaaatatggatgatg
gaaaatgctgaatactacaaacagatgaagaagagagaagaggttgaggaaagagagagg
gagaatcaagcaaaacaagaccaaaagaagaataagaggaagccaaagagaaaacctcag
gaaactgcaaacactgctggagaagccattgaaaagttattaaaggagaagaaaatatcc
agcaagatcaactatgacgtacttaagaacctggagaaacctaccacggacgtcgtccga
cctacagcagaagcaacgcccccacttgatcctacacctctgaaaagagagacggttata
tcgcccggtatcaaagcagaacgagttatatcgaccggtatcaaagcagaacgagagtca
actaaacgagccattacagaagtgatcgaagaagatggcccgcctcgtaaacggaaggtc
tcggccaagccatcgatgccgtcagtgggggaaccatccccagtcgtagccccagacatt
ccacaagaggttgtcgtagaaacgggtccggtcgaacagcacgaggaaggcgatgatgac
gacgttggggattacttcccagaagacgaagatgatatggacgactaccaggaaggttat
gatacagactga
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