Apostichopus japonicus (Japanese sea cucumber): 139971354
Help
Entry
139971354 CDS
T10891
Name
(RefSeq) chromatin-remodeling ATPase INO80-like isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139971354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ajj03036
]
139971354
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
139971354
INO80 complex (yeast)
139971354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
L51_S25_CI-B8
PSY3
Motif
Other DBs
NCBI-GeneID:
139971354
NCBI-ProteinID:
XP_071833816
LinkDB
All DBs
Position
8:complement(26499152..26611185)
Genome browser
AA seq
1614 aa
AA seq
DB search
MDKKIQDEGTVTSNPTLPEGPVFGVTLAKPLQFQRLERALQLDTFLNEVERTIEKANKPK
DSKVEPLFVEEIGRQFVPKSQLEKEDDRIKQRKKDNLKVINGLPLTRSERKTEKRKLYNF
SKVKKNRRWLKNLLLSDSSESSDSDDQEPMNKWELKQMLRVHKLKKQYTKQFYSDPELKQ
YMYYGSSLVSFYDKFLDHQSQFLSSQGKEEPEKKKTNDKPSDKIKPDVAEVKAEQPKTPP
PVLPPPAPPPPAPPSPPPPPPLPTVPLPPPLPAAPTTTVDKKPKEETLEQAQEISTPVLE
AETLAIIPVSNEAPQSSNTAVAVFQDTVGRKYNSIKDVDTRRKRIWMAISKRDIPKAQKH
RISVHNTILTNCRKQAQACQKELRRHAIQIQRTCKETPYRARRLTREMTAFWKHYDKVEK
EHRKRAEKEAQEQRRLDDEIREAKKQQRKLNYLITQTELYAHFMSRKLTGEGDDEKNRIL
SRLEEPTLNRREVAVKGGVLVDVEGDDYDSEWMKLQALQNVTNAYKACESDMSEFDAQNA
FLELKFSLSNPVLKSESNFAQPEIFQGKLKSYQLVGMNWLINLYDCGINGILADEMGLGK
TVQSIAFLAHLGEKQGIWGPFLIIAPASTLHNWQQECSRFAPSFKVLPYWGNPMDRRTLR
KFWNQRIPSLQTENAEFHILITSYQLVVQDIKYFQRIKWHYMILDEAQAIKSSSSVRWKL
LLGFKCRNRLLLTGTPIQNSMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAEKQSGI
NEEQLSRLHMILKPFMLRRVKKDVENELSDKIEILMYCHLTSRQQMLYQAVKNKISIDDL
IRSTGSNISQVQSTTNNLMNLVMQFRKVCNHPDLFEKRETHFPYFFKLDSYILPRLIYRD
GLLARSDSGRQKVLNNTCCIFQPDHIHNSIKKATNTANSCFSFSRLIGLSPSELHASVTG
DIKMKWCSILDAHRTADRAYHEHVWAQPGNSCFPKNTLVLWPLRPTSRASRSDSHLLQKL
VFTSRSSNMLSHESHTIHFMRETWWHRKIRSRKNSGRRLGVQASPRGASSNQILSDGLTG
DARSNVFSFLQNPRPPTIRTCQATFAPNFLLGCYPRVCAPPSKMYCNDRGAMYDLHRAHS
MNSAETWQCVMHRARIVCKQHYVSLLQPSACSGTDELRPNRGWSHIDIPDKEYLVSDCGK
MCVLDELLKRLKHGGHRVLIYSQMTRMIDMLESYMWHRKHTYMRLDGSSRIHERRDMVAD
FQTRSDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVY
RLICKGTIEERILERAQEKSEIQRMVISGGNFRPDQLKPKEVVSLLLDDAEIEKKFRQKQ
IERRGQDRGKDRKRKKERLAEMHKDAKASKEDCTEPGGGADVEDTAASVDSAVPSPMSGI
SVNSESTQLSSSAADTDVAPTAGDDRATPSPQLSTAGDGADEDGDGSTGPSPQSALSRRM
GRRRVGGLKMTSMKKPISRSSRPTRKGTAAAAIAGARAGAVAGTAAAYAAYGFSFTGLPD
PSLPSSLSSTSSASNNTAVSATVAKSEPPPSSSSKVEESEKGAVGTKQPAESKT
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaagatacaagatgaaggtactgttacctctaacccgactttacccgaaggg
cctgtgttcggagtcactttggctaagccattacaattccaaaggctggaaagagctttg
cagctggacaccttcttgaatgaggtggaaagaaccatcgagaaagcaaataaacccaaa
gatagcaaagtagaacccttgtttgtagaagaaattggcagacagtttgtacccaagagc
caactcgaaaaggaggacgacagaatcaaacaacggaaaaaagacaaccttaaagttata
aatggactgcctttgactagatcagaaaggaaaactgagaagagaaaactgtacaacttt
tcaaaagttaagaaaaatcgaagatggttgaagaatctcctgctcagtgattcatcagaa
tcttcagactcagatgaccaggaacctatgaataaatgggagttaaaacaaatgctaaga
gtgcataaactaaagaagcaatataccaaacagttttactcagatccagagttgaaacag
tacatgtactatggctcaagtcttgtgtctttctatgataaatttttggatcatcaaagt
cagtttctcagttcacaaggaaaagaagaaccagaaaagaagaaaacaaatgataaacca
agtgacaagataaagccagatgtagctgaggttaaagcggaacaaccaaaaactccacca
ccagtactaccaccacctgctcctcctcctcctgcccctccatccccaccaccacctcca
ccactaccaacagtacctctaccaccaccactaccagcagcacccacaaccacagttgat
aagaaaccaaaggaggaaacacttgagcaggcacaggaaatctcaacgccagttttggaa
gctgaaaccttagccatcattcctgttagcaatgaagcacctcagtcatccaacacagcg
gtcgctgtatttcaggacacggttgggcgaaagtacaactcaatcaaggacgtggatact
cgtaggaaacgcatttggatggcgatatcaaaacgagacattccgaaggctcagaaacac
agaatatccgtccacaacacgatcctcaccaattgtcgaaagcaagctcaggcctgtcag
aaggagttacgaaggcatgccatacaaatacagagaacttgcaaagagactccatatcgg
gcaagaagattgaccagggagatgacagctttctggaagcattatgacaaggtggagaag
gaacatcgtaagagggcagaaaaggaagcccaggagcagaggcggttggatgatgaaatt
agagaggcgaagaaacaacagagaaaattaaactacctcattacccaaacagagttgtat
gctcacttcatgagtagaaagttaacgggagaaggcgatgatgagaaaaatcgaattcta
agtcgtctggaggagccgacccttaacaggagggaagtagctgtcaaagggggtgttctg
gtcgatgttgaaggagatgattatgacagtgaatggatgaaactacaagcactacaaaat
gtgacgaatgcttacaaggcctgtgaatctgacatgagtgaatttgacgcccagaatgca
tttctagaattaaaattcagcctgtcaaacccagtgttgaagtctgaatctaactttgct
caacctgagatatttcagggcaaactgaagagttaccagctggtcgggatgaactggtta
atcaacctctatgactgcggcattaatggcattctagctgatgaaatgggactcggaaaa
acagtacaaagtattgcatttctagctcaccttggagagaaacaaggtatatggggtcct
ttcttaattattgctcctgcttctactcttcataattggcaacaggagtgttccagattt
gcacctagttttaaggtgctcccatactgggggaacccaatggatcgaagaactcttaga
aaattctggaatcaaaggattccatctttgcagacagaaaatgcagagtttcacatccta
atcaccagctaccagttagttgttcaggacatcaagtatttccagagaataaaatggcac
tatatgatactggatgaagctcaagccatcaagagcagttcaagtgtgagatggaaactt
cttcttggttttaagtgtcgtaatagacttcttctcaccggcacaccaatccagaacagt
atggctgagctttgggcattattacatttcatcatgcccacactctttgacagtcatgag
gaatttaatgaatggttctctaaggatattgaaagccatgctgagaaacagtctggtatc
aatgaagagcaattatcgaggttacacatgattctgaagccattcatgctgcgtcgtgtc
aagaaagatgttgagaatgagctatcagacaagattgaaatattgatgtactgccatctg
accagtagacagcagatgctttatcaagctgtgaagaacaagatctctatagacgatctc
atcagatcaacgggatcgaatatttctcaggttcagagcacaaccaacaacctcatgaat
ctcgtcatgcaattcagaaaggtttgcaatcaccccgacctatttgaaaagagagagact
cattttccatacttcttcaagttggattcctacatcttaccgaggttgatatacagagat
ggattgttagctcggtctgatagtggcagacaaaaggtgctgaacaacacatgttgcata
tttcagcctgatcacattcacaacagtatcaagaaagcaacaaacaccgcaaacagttgt
ttttcattctcacggttgattggattatcaccgtcagagttgcatgcctcggtgaccggt
gatatcaagatgaagtggtgtagtattctggatgcccataggactgctgatagagcttat
catgaacatgtctgggcacagcctggcaacagctgctttcctaagaacacactcgtcctc
tggccactgagaccaaccagccgagcctctcgatctgacagtcatctactgcagaaattg
gtctttacgtcccgttcttcgaacatgctgtctcacgagagccataccattcatttcatg
agagagacttggtggcatcgaaagatcagaagcaggaaaaactctggcagaaggctgggt
gtgcaggcatctcctcgaggagcgtccagtaatcagatcctctctgatgggttgactggt
gatgcaagatccaatgtcttctccttcttacagaatccgagaccccctactataagaaca
tgtcaggctacatttgcacccaatttcttattgggatgttaccctagggtttgtgcacca
ccatcaaagatgtactgtaatgaccgtggtgcaatgtatgacctccacagggctcacagt
atgaactcagcagagacatggcaatgtgtaatgcacagagctcgtatcgtctgtaaacag
cactatgtctctctgttgcagccgtctgcctgtagtggcactgatgaactcagaccaaat
agaggctggtcacatattgatattccagacaaagaatacttagtgtctgattgtgggaaa
atgtgcgtcttagatgaactattgaagaggttgaagcacggaggacacagggttttaatc
tattcacagatgacaagaatgatcgatatgttagagtcttacatgtggcacaggaagcac
acctacatgaggttagatgggtcgtccaggatccacgagagaagggatatggttgcagac
ttccagacaagatctgatatatttgttttcttgttgagtacaagagccggtggacttgga
ataaatctgaccgcagctgacactgtaatcttttacgacagtgattggaatccaaccgtt
gaccagcaggcgatggaccgtgcccatcggctgggccagaccaaacaggtgacagtctac
aggctcatctgtaaggggaccattgaagaacggatccttgaaagggcccaggaaaagagt
gagatccagcggatggtgatcagtggaggaaactttagaccggatcaactgaaacctaag
gaggtagtctctctccttctagatgatgcagaaattgagaaaaaatttcgccagaaacaa
atagagaggaggggccaggatagaggcaaggacaggaaaagaaaaaaggagagacttgct
gaaatgcataaggatgccaaggcaagtaaagaggattgtacagaaccaggaggaggagca
gatgtggaggatacagcagctagtgtggactcagctgttcctagtcctatgagtgggatc
tctgtgaactctgagagtactcaactttcaagcagtgctgccgatacagatgtagcaccc
acagcgggggatgacagggccactcccagtcctcagctgtcaaccgctggagacggcgct
gacgaggatggagatggtagcactgggccatcaccccagtctgcactgagtagacgcatg
gggaggagacgtgtgggagggctcaagatgacatcgatgaagaaaccaatcagcagatcg
agcaggcctacccgtaaaggaacggctgccgcagccattgcaggcgctagggccggggcc
gtcgctggaactgcggccgcctatgcagcttatggtttcagttttacaggtttaccagat
cctagcctcccctcatccttgtcatcgacatcttctgcctcaaataacacggccgtctct
gcgacagtagctaaatcagaaccgccgccatcctcatcatcgaaggtggaagaatccgag
aagggagccgtcggaaccaaacaacctgcggagagtaaaacatag
DBGET
integrated database retrieval system
