Apostichopus japonicus (Japanese sea cucumber): 139971445
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Entry
139971445 CDS
T10891
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase-like
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00860
Porphyrin metabolism
ajj00970
Aminoacyl-tRNA biosynthesis
ajj01100
Metabolic pathways
ajj01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
139971445
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139971445
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ajj01007
]
139971445
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ajj03016
]
139971445
Enzymes [BR:
ajj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
139971445
6.1.1.17 glutamate---tRNA ligase
139971445
Amino acid related enzymes [BR:
ajj01007
]
Aminoacyl-tRNA synthetase
Class I (A)
139971445
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
139971445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
WHEP-TRS
ProRS-C_1
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_1c_C
tRNA-synt_1c_C2
Pentapeptide_2
Arc1p_N_like
tRNA-synt_1e
GST_C_3
Motif
Other DBs
NCBI-GeneID:
139971445
NCBI-ProteinID:
XP_071834022
LinkDB
All DBs
Position
8:complement(28563144..28591999)
Genome browser
AA seq
1509 aa
AA seq
DB search
MSVSLTINKVNPPVAALLAIEHLDGSVTANVEQGKATSLKLSDDLTFTTPVAICRYLARL
APSSGLYGNNILEATEIDHWLEYSVNRLGNPTEFKDAVSDLDHILGPRTYLVAHGLTIAD
FAVWGALRANPSWSSKNDSHVNLSRWYNFLDSQEKFQKVSCLLPKKEEKQGSTKTSDVGT
FIELPGAKMGEVVVRFPPEASGYLHIGHAKAALLNQYYQQAFKGKLIMRFDDTNPAKESS
EFEQVILEDLKLLDIQPDLFTHTSDHFDRMITIAEDLIKSSKAYVDDTDPEEMKRQRDLR
EESKNRNNSVEKNLQLWSEMKKGSEVGQKCALRMKMDMKSNNGCMRDPTIYRCKLEAHVR
CGDKYKAYPTYDFACPIVDSLEGVTHALRTTEYHDRDDQYYFILDALKMRKPHIWEYSRL
NLQHTVLSKRKLTWFVDEKLVEGWNDPRFPTVRGVIRRGMTIEGLKQFIAAQGSSRAVVM
MEWDKIWSFNRKVIDPIIPRYNGVVDKDAVPVTVSGVKVEAKDVPKHAKNNAIGNKKVWY
SDKVFVDQADAVLFNEGEIVTFINWGNLIIQKINKDGSGKVISMTADLNLENEDYRKTTK
ITWLAETGNAPFVPTTLIYFDDLISKGILGKDEDFKQFVNKNSRHETAVLGDPELASLKK
GEIIQMQRKGYFICDQAYAPASRHTSRTSPCILFNIPDGKKTTSTTSDSTKNAPQEASKS
KKGKNKGGSSDSAVPTTTASPQEVEAVIARITAQGDSVRDLKSKKAAKDEIDQAVKVLLS
LKSDYKNMTGVDYKPGAKPPKTDNPGHGNPGSDNPGHGNPGHGNPGHGEADVAALVEKIT
AQGDKVRSLKSSKAPKVDIDAEVKILLSLKVKYKAATGVDYKPGSNPPKKASNPGHGNPG
HGNPGSDNPGHGNAAADALAEKIKEQGDKVRNLKSKKAPKEEVDAEVKTLLDLKSQYKTS
TGSDYQPPGAKKQEKKGKDKKGKGGEKESKQKKEAAAEEDSGGKKQTRLGLEAKKEENLS
DWYSQVIIKSEMIEYYDVSGCYVLRPWSFSIWEKITAFFDAEIKKLGVENCYFPMFVSAS
ALEREKTHIADFAPEVAWVTRSGNSELAEPIAIRPTSETVMYPVYSKWVQSHRDLPIKLN
QWCNVVRWEFKHPQPFLRTREFLWQEGHTAWATREEAVDEVYKILELYAAVYEKLLAMPV
VRGRKTEKEKFAGGDFTTTVEAFIVASGRGLQGATSHHLGQNFSKMFDISFEDPNEPNKR
EFAHQNSWGLSTRTIGALCLAHGDNVGLILPPKVACVQVIIVPCGITVKSTDEDKKAIND
KADSYIALFKAADIRVKCDDRENYSPPWKFNHWELKGVPVRMEIGPRDISKNQFVAVRRD
TSEKLIFKEAEAVEKIGNLLEDIQSSLYNKASKELQEHKKLSHDWDEFCTLLDQKNIIQI
PFCGDIKCEETIKKDSARGQDAEPGAPSMGAKSLCIPMKQPQELPEGTKCLHPECSNKAK
YYCLFGRSY
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttagccttacaatcaataaggttaatccacccgttgctgcattgcttgccatc
gagcatttagatggaagtgtgacagctaatgttgaacagggaaaggcaaccagcctcaag
ctctctgatgacctcacattcaccactccagttgctatatgccgttacctagctaggctt
gcaccttccagtggtctctatggaaacaacattcttgaagcaacagagattgatcactgg
ttggagtatagtgtcaatcgccttggcaacccaacagagttcaaagatgccgttagtgat
cttgaccatatattgggaccgcgtacctacttggtggcacatggtttgacgattgcagac
tttgcagtgtggggagcattgagagcaaaccctagttggtcatcaaagaatgacagccat
gtcaatttgtcaagatggtataacttcttggactcgcaggagaagtttcaaaaggtttcc
tgtctgttgccaaagaaagaggagaaacaaggatcaacgaagacttccgatgttgggact
ttcattgagctgccaggggctaagatgggcgaggtagtggtgagatttccaccagaggcc
agtggatatcttcatattggtcatgctaaagctgctcttttgaaccaatattaccagcaa
gcatttaaaggtaaactcattatgaggtttgatgacaccaatccagctaaagaaagcagc
gagtttgaacaggttatcttagaagatttgaagctacttgacattcaaccagatttattc
actcatacctcggatcattttgatcgaatgataaccattgcagaggacttgatcaagtcg
agcaaggcatatgtggatgacacagatcctgaggaaatgaagagacagagagatctgaga
gaagaatcaaagaacagaaataactcggttgagaaaaatctacagctctggagtgagatg
aagaaagggtcagaggtcggccagaagtgtgccttacgaatgaaaatggacatgaagagt
aataacgggtgtatgagagatcctaccatctacaggtgtaagctggaggctcacgtacga
tgtggagacaaatacaaggcgtatcctacctacgactttgcatgccccatcgtagacagt
ttagagggagtgacccacgcactcaggacaacagaataccacgatagagatgatcaatat
tacttcatcctggatgctctgaagatgaggaagccacacatctgggagtacagcaggctc
aaccttcaacacactgtcctctccaaacggaaactgacgtggttcgtggacgagaagctt
gtcgagggatggaatgatccacgttttccaactgttagaggagttataagaaggggcatg
acaatagaaggtctgaagcagtttattgcagctcagggatcatcaagggctgttgtcatg
atggagtgggacaagatctggagcttcaatcgaaaggtcattgaccccatcattcctcgt
tataacggagtagtagataaagatgccgttccggtcaccgttagtggtgttaaagtggaa
gccaaggatgttcccaaacatgccaagaacaacgcaatcggtaacaagaaggtctggtac
agcgacaaggtgtttgtggaccaagccgacgcagtactattcaatgaaggagaaattgtt
actttcatcaactgggggaatctcatcatccagaagataaacaaggatggctctggaaaa
gttatttccatgactgctgatctgaatcttgaaaatgaggactacagaaagacgacgaaa
attacttggttggccgagactggaaatgcgccattcgtaccgaccacgttaatctatttt
gacgatctgatctccaaaggaatacttggcaaagacgaagatttcaaacagttcgtcaac
aaaaattcaagacatgagactgcagtcctaggagatccagaactggcctctctgaagaaa
ggagaaatcatccaaatgcaacgaaaaggatacttcatatgtgatcaggcgtatgctcca
gccagtcgtcacacaagcagaaccagtccatgcatattgttcaacatacctgacggtaaa
aagacaaccagcacaacgagtgacagtactaagaatgctcctcaggaagcaagcaagagt
aagaaaggcaagaacaagggtggatcaagtgactcagcagttcctactaccactgcctct
ccacaggaagtggaagctgtcattgccagaataactgctcagggagatagtgtccgggac
ctaaagtcaaagaaagcagcaaaggatgagatagatcaagctgtaaaggttcttttgtca
ctgaagagtgattataagaacatgactggtgtggattacaagccaggtgctaagccacct
aaaactgacaatcctgggcatggcaaccctgggtccgacaaccctgggcacggcaaccct
gggcacggcaaccctggacatggcgaagcagatgtagcagcactagtggagaagataact
gcccaaggtgataaagtcagaagtctgaagtcgagtaaagctccaaaggtagacattgat
gctgaagttaagatcttactgtccctgaaggttaaatacaaggctgccacaggtgtagac
tacaaaccaggttccaacccaccaaagaaagcaagtaacccaggccacggtaaccctgga
cacggtaacccaggaagtgacaaccctggacatggaaatgcagcagctgatgcccttgct
gaaaaaatcaaggagcaaggtgataaagtcaggaatttgaaatcaaagaaagctccaaag
gaagaggttgatgcagaagtaaagaccctgttggatctgaagagccagtataagacatcg
actggatccgattaccagccacccggagctaagaaacaggaaaagaaaggaaaggataag
aaaggaaaaggtggagagaaagaatccaaacagaagaaggaggctgcggcagaagaggac
agtggaggaaagaaacagacaagactcggtctagaagcaaagaaggaagaaaacctcagt
gattggtactcacaggtcatcattaaatctgaaatgattgaatactacgacgtcagcggc
tgttacgtactgcgtccttggtcctttagcatctgggagaaaatcacagcattctttgac
gcagaaatcaagaaattaggcgttgaaaactgttattttccgatgtttgtctccgcgagt
gccttagagagggagaagactcacattgcagattttgcccctgaagtagcctgggtaacc
agatctggaaattccgagctagcagaaccaattgcgatccgaccaaccagtgaaaccgtt
atgtaccctgtttattcaaagtgggtacaatcacaccgagatcttccaatcaaattgaac
cagtggtgtaatgtagtgaggtgggagtttaagcacccacagccattcttgaggacaaga
gaattcctctggcaagaaggtcacacagcctgggcgacgagggaagaagctgttgacgaa
gtttacaagatcttggaactctacgctgccgtttacgagaaacttttagccatgcccgtc
gtccggggtaggaagacagaaaaggaaaagtttgccggcggtgacttcacaacgactgtt
gaagctttcattgtcgccagcggtagaggccttcagggagctacctctcatcatctggga
cagaatttctcaaagatgtttgacatcagttttgaagatcctaacgagccgaataaacga
gagtttgcccaccagaattcatggggtctctccaccaggacaattggtgctctctgcttg
gcccacggtgacaacgtgggtctcattctacctccaaaagtagcttgcgtacaggtgatt
attgtaccatgtggtatcacagtcaagtcaacagacgaagacaagaaggccatcaatgat
aaagccgacagttacatcgccctcttcaaagccgctgacatcagagtcaaatgcgacgac
agagaaaactactcaccaccctggaaattcaaccactgggagttaaagggagtcccagtg
agaatggaaatcggcccacgagacatctccaagaatcagtttgtcgccgtcaggcgagac
acatcggagaaactcattttcaaggaagcagaagctgtagagaagatagggaaccttcta
gaggacatacagagtagtttatacaacaaagcgagtaaagagttgcaggagcataagaag
ctgtcacatgactgggatgaattctgtactttattggaccagaaaaatattattcaaatt
cccttctgcggtgatatcaagtgcgaagagacgatcaagaaggacagtgcaagaggtcaa
gatgctgaaccaggtgcaccctcgatgggggctaaaagtctctgcattcctatgaagcaa
ccgcaagagctcccagaaggtaccaaatgtctgcacccagaatgcagtaacaaagccaag
tactattgcttgtttggtagaagttactga
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