Apostichopus japonicus (Japanese sea cucumber): 139971562
Help
Entry
139971562 CDS
T10891
Name
(RefSeq) serine--tRNA ligase, mitochondrial-like isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139971562
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ajj01007
]
139971562
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ajj03016
]
139971562
Enzymes [BR:
ajj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
139971562
Amino acid related enzymes [BR:
ajj01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
139971562
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
139971562
Prokaryotic type
139971562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Speriolin_N
Motif
Other DBs
NCBI-GeneID:
139971562
NCBI-ProteinID:
XP_071834249
LinkDB
All DBs
Position
8:complement(31156833..31166539)
Genome browser
AA seq
468 aa
AA seq
DB search
MKIRVTPLMRILQGGCSLCRQSSTVTSTSGEDRSSSMDRKNIFKSVKPDVDMNHILNNTD
AIARNIQQRKGDADVHKVVTLWKELKQLKEKLQSSGGVGLSGSNFQVSKDSLTAQVLETE
QLLLEQVCALPNDTHPDTPMNESDEPRLVEEIGVKRKFDFPIKDHAQLGENLNIIRTKHL
GHITGHRSYYLRGAGAQLERALVKYTLERLVKRHNFKLISVPDIVKANVFEGCGMRTEGL
HTQVYKLNPAYHPGNLCLAGTAEVGLAGYLMNRTFHVDELPLRLAAVSRCFRAETTHSSE
ARGLFRVHQFTKVEMFGVTSGESSNESDDFFKEIVAIQRNLFADLGLHFQILDMPAHDLG
SPAYRKYDVEAWMPGRDSYGEISSASNCTDYQSRRLRIKYRTDGNSDSVYAHTLNGTACA
VPRLIIAILENYQDKDGSVRIPDVLQPYMFGQKVITRPVRGHLHHTRL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcagagtgactccccttatgagaatattacaaggaggttgttctctttgtaga
caaagctctactgtaacttcaacttccggggaagacagatcttcctctatggataggaag
aatatttttaaatcggtgaaacctgatgttgatatgaaccatatccttaacaatactgat
gcaatagcacggaacatccagcaaagaaaaggagatgcagatgttcataaggtggttaca
ctctggaaggagttgaaacaactcaaggaaaaactccagtcatctggtggtgtgggtttg
agtggttccaattttcaggtttcaaaagacagtttgacagcccaagtattggaaacagag
cagctccttctggagcaagtctgtgctttaccaaacgatactcatcctgacacaccaatg
aatgaatctgatgaaccacgacttgtggaagaaattggagtcaagaggaaatttgacttt
ccaataaaagatcacgcacagcttggagagaacctgaacataatccgtacaaaacattta
ggccacatcacaggccatcgatcatactatctaagaggtgctggtgcccagttggagaga
gcgttagttaagtacaccttggagaggttggtgaaaagacataacttcaagctcatctca
gttcctgacatcgttaaagcaaatgtatttgaaggctgtggtatgcgtaccgagggtctt
catactcaggtatacaagctaaatccggcttatcaccctggtaacctgtgtctagctggg
acagctgaagtaggcttagcaggctatttgatgaatcgaacctttcatgttgatgagcta
cctctaagattggcggctgtcagtcgctgcttcagagctgaaacaactcactcttcagag
gccaggggtctattcagagtccatcagtttacaaaggttgaaatgtttggtgtcacatct
ggagagagctccaatgaaagtgatgattttttcaaggaaattgtagcaatccagaggaac
ctttttgcagatttaggtctccatttccaaattttagacatgcctgctcatgaccttggg
tcaccagcttacaggaagtatgatgtggaagcatggatgccaggcagagatagctatgga
gagatatccagtgcatcaaactgcacagactatcaaagcagaaggctgaggataaagtac
aggacagacggaaacagcgactcggtttatgctcatacgctcaatggaacagcatgtgca
gtaccaaggttgattatagcaattctggaaaattaccaggataaagatggctctgtccgt
attccagacgtcttacaaccgtatatgtttggccagaaggttataacaaggccggtcaga
ggtcatcttcaccacaccagattatga
DBGET
integrated database retrieval system
