Apostichopus japonicus (Japanese sea cucumber): 139971572
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Entry
139971572 CDS
T10891
Name
(RefSeq) F-box only protein 11-like
KO
K10297
F-box protein 11
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ajj04121
]
139971572
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139971572
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
139971572
NCBI-ProteinID:
XP_071834276
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Position
8:complement(3995438..4041094)
Genome browser
AA seq
867 aa
AA seq
DB search
MMSSNSRSSTGPMLRRSRRLSERKPGASLSLNGPNNTSHSKGVYHDKDRPYTLRRKASSL
SQGNENIITTSSKVKRSRWASSDVQNVHGISSENNFLQHQVPDEILIKVFSYLLERDLCN
VACVCKRFNTLANDLSLWKRLYQSVYEMTLPLLRPAPTKFKFVQPDKVESPNIWKESFKT
LYNAIHVKPGYAAYVYANHKLFEGREIQYYDTIEEALSSVESCVYPLILLHEGVYSGEWL
YIDSPVCILGAAPGDITDSVIVENSKESTFLFMEGCEDAYLGYISIRFNPENNQNQQHHK
HSCIEIGSNCLPTIDSCNIRSKSQVGAAVSVSGRKSAPTIKNCVISDCENVGLYINDHAE
GNYLDNEISSNALAGIWVKNYAKPIIRRCHIHHGRDVGIFTFDNGMGYFDRCDIHHNRIA
GFEVKAGANPSVVNCEIHHGQTGGIYVHENGRGEFIENQIHSNTFAGVWVTSNSDPTIRA
NEIYNGHQGGVYIFGEGRGLVENNDIHSNALAGIQIRTNSNPIIRGNRIHDGQHGGIYVH
EKGKGLIIENEVYSNTLAGVWVTTGSCPELRRNRIHSGKQVGVYFYDNGHGTLEENDIFN
HMYSGVQIRTGSNPIIRRNKIWGGQNGGILVYNGGLGVLEYNEIFDNAMAGVWIKTDSNP
YLKHNKIHDGRDGGICIFNGGRGVLEENEIFRNTQAGVLISSQSHPKLKRNKIFDGLAAG
IEITNNATATLEGNQVFNNKFAGICLATGVSPDMKDNKVYGNKNAIEKAVKYGRCLYKIS
SYTSYPMHDFYRCKTCNTTDRNAICVNCIRRCHAGHVVEFVTHDRFFCDCGAGTLSHQCQ
LAGEPTKDTDTLYDSAAPIESHTLMVN
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgtccaatagtagatcttccaccggaccaatgttaagaaggtcgcgacgatta
agtgaaagaaaacctggtgcctctttgtctttaaatggtccaaacaacacatctcattcc
aaaggagtttaccatgacaaagacagaccgtacacactaagaagaaaagcatcatcccta
agtcaaggaaacgaaaatataattacaacctcatcaaaagtaaaaagatctcgctgggca
agttcagatgtacagaatgttcatggtatcagttccgaaaataacttccttcaacaccag
gtgcccgacgagatcctaatcaaggtgttttcctacctattggaaagggacttgtgcaat
gttgcttgcgtctgcaagcgattcaatactctagcgaacgatctgtcactatggaaaaga
ttataccagtcagtctatgaaatgacacttccacttttaaggccagctccaacaaaattc
aaatttgttcagccggacaaagtagaatcaccaaacatatggaaggagagctttaaaacc
ttgtataatgccatccacgtcaagccaggatacgcagcctatgtatacgccaatcataag
ttgtttgaaggacgagagattcagtattacgacacaatcgaagaggctttatcatcggtg
gagagctgcgtctatccacttatactgctccacgaaggcgtgtacagcggggagtggttg
tatatagattcccctgtgtgtatcctcggtgcagcacctggtgacatcacagatagtgtt
atcgttgaaaatagcaaagagtcaacgtttctcttcatggaaggatgtgaagatgcttac
cttggttatatcagtattaggttcaatccagaaaataatcagaaccaacaacatcacaaa
cattcatgcatagagatagggtccaactgtctgccaacaatcgatagttgtaatatcaga
agtaaatctcaagtcggagctgctgtcagtgtgagtggaaggaaatctgcccctacgatc
aagaactgtgtgatcagcgactgtgaaaatgtaggcctgtatataaatgaccatgcagag
ggtaactatttggataatgaaatcagtagtaatgccttagcaggaatctgggtgaagaac
tatgccaaacccatcatcagacgttgtcacatacaccacggtcgcgacgttggaatcttc
acgttcgataacggaatgggatattttgacagatgtgacatccatcataacaggatagca
gggtttgaggtgaaggcaggtgccaacccctcagtggtcaactgtgaaattcatcacggc
caaacggggggaatctacgtccatgaaaacggaaggggagaattcatcgaaaatcagatt
cattcaaacacatttgcaggggtatgggtcacatccaacagtgatccgacgataagagcc
aatgaaatctataacgggcatcaaggaggcgtgtacatattcggtgaggggcgtggcctt
gttgagaacaacgacattcatagtaatgccttggctggtattcaaatccgtaccaatagt
aatcctatcataagggggaatcgtatccacgatggacaacatggaggtatatatgtgcat
gaaaagggtaaaggtctaatcattgagaatgaggtgtatagcaacacacttgctggagtc
tgggtcacaacaggaagctgtccagagctaaggagaaacaggatccacagtggcaagcag
gttggtgtttatttctatgacaacggtcacggcaccttggaagaaaatgacatattcaat
catatgtactctggcgtccaaatcagaacggggagcaaccctattatcaggcggaacaag
atttggggcgggcagaatggcggaattctggtgtacaacggaggccttggtgttctagag
tataatgagatatttgataacgccatggctggtgtgtggatcaagacggacagcaacccc
tacctcaagcacaacaagatccacgacggcagggacgggggaatctgtatattcaacggt
ggaagaggtgtcttggaggagaatgagatcttcaggaatacacaagctggagttctcatc
agctctcaaagccatccaaagctgaagaggaacaaaatatttgacggtttagcagctggc
atcgaaatcaccaacaatgctacagctacactagaaggaaatcaagtctttaacaacaaa
tttgctggcatttgtttagcaacaggtgttagtccagatatgaaagataacaaagtgtat
ggaaacaagaatgccattgagaaggccgtcaagtatggcagatgtctatataaaatatcc
agttataccagttaccccatgcatgacttctacaggtgtaaaacttgtaacacaacagac
cgaaacgccatatgtgtgaactgcatcaggagatgtcacgcaggccacgtggtggagttt
gtaacacatgacagatttttctgcgattgtggagcagggacgttatctcaccagtgccaa
ctagcaggggaacctaccaaagacacagacacgctgtacgactcagctgctcccatagaa
tcgcacactctaatggtaaactga
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