Apostichopus japonicus (Japanese sea cucumber): 139971581
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Entry
139971581 CDS
T10891
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin A-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04120
Ubiquitin mediated proteolysis
ajj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139971581
04120 Ubiquitin mediated proteolysis
139971581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ajj04121
]
139971581
Enzymes [BR:
ajj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139971581
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139971581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_16
zf-C3HC4_3
zf-HC5HC2H
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H_2
FANCL_C
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
139971581
NCBI-ProteinID:
XP_071834295
LinkDB
All DBs
Position
8:complement(31399732..31419665)
Genome browser
AA seq
648 aa
AA seq
DB search
MINMRGAALTTASFVLTAAVVGHAYYQKKQFYPSVVYITKSNPSMAVLYIQAFVFVILMG
KLVKKVFFGQLRASEMEHLIERSWYAVTETCLAFTVFRDDFSPKFVAMFTLLLFLKCFHW
LAEDRVDYMERSPVISVLFHLRVLTLLLFLGTLDSLWVNFAYHSTLTKGATVQLVFGFEY
AILFTIICSVLLKYVLHTIDLQSENPWENKAVYMLYTDLIMGFIKVFLYTAFVAIMIKIH
TFPLFAIRPMYLTMRSFKKAVNDIIMSRRAIRNMNTLYPDATPEELASMDNVCIICREDM
NTACKKLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASVRQIQQPPAQQPQQPQQPQAN
NMPQPGQAMPPFPGYPFWLPPFQPGAGFPHAPPGGPPPPPPGQQEPSSSGSDQQQSQTPS
AEVPSSTTPASPGTTTEPSSTTTDAPQHAPGIQPNAMPGMPGMPPMPPFMMPPPFPMMPP
FGIPPPVPPVNFTGLSDEELRKLEGHERQNVEARVECLRSIQTLLDAAVVQMQQYSNTVN
RIGVYIPNPSSNPVNMRNAPNTPPPSPAAEDVADGGGPEKTNSTLDKEDTAPLKKAKTSS
LDLAGLEGASGYTPPTEGELIPEFEGESPDENDKDGIRRRRLQRLQSS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgataaatatgagaggcgcagcattaaccacagccagctttgtgctgacggctgcggtt
gttggacatgcctactatcagaagaaacagttttatccgtcagtggtctacattactaaa
tcaaatcccagcatggcggtactctacatacaagctttcgtgtttgtaattctgatgggt
aaattagtgaagaaagtcttctttggacagctgagggcatcagaaatggagcatcttata
gagaggtcatggtatgccgtcacagagacctgtcttgctttcacagtcttcagagatgac
ttcagccccaaatttgtggccatgttcactcttttgctttttctaaaatgtttccattgg
ttagctgaagatagagtggactatatggaaagaagtcctgttattagtgtcctcttccat
ctaagagttctcactttactcttattcttgggcacgttggattccctttgggtgaacttt
gcataccacagtaccctcaccaaaggagcaacagttcagctagtatttggctttgagtat
gctatcctgtttacaatcatctgcagtgtcctcttgaagtatgttcttcacactatagat
cttcaaagtgagaatccttgggagaacaaagctgtctacatgttgtatactgacctcata
atgggtttcatcaaagtgttcctctacactgctttcgttgccattatgatcaagatacat
accttccctctgtttgcgataagaccaatgtatctcactatgaggtcctttaagaaggcc
gtcaacgatatcatcatgtctcgaagagcaatcagaaacatgaacacattatatccagat
gccacaccagaggaactcgcatctatggacaatgtgtgcattatctgcagggaagacatg
aacacagcttgcaagaaactaccttgcaatcatatctttcatactagttgcttgagatct
tggtttcagagacaacagacttgcccgacttgcagaatggatgtgctgagagcatctgtg
agacagatacagcagccaccagcccagcaaccacagcaaccacaacagccacaagctaac
aacatgccacagcctgggcaagctatgccgccattcccaggttaccctttttggctacca
ccctttcagccaggagcaggattcccccatgctccccctggaggtcctcctcctcctcca
ccagggcagcaggaaccttcctcttctggaagtgaccagcaacagtcccagacaccgtct
gctgaagtcccatcgtcaacgacacctgcttctccagggactacaacagagccatcttca
actacgacagatgcaccgcagcatgcaccaggtattcaaccaaatgcaatgcctgggatg
cctggaatgcctcccatgccaccatttatgatgcctcctccatttccaatgatgccacca
tttggtattcctccccctgtcccaccagtaaactttacaggtctttcggacgaagagctg
cgaaagttagaaggacacgagaggcagaatgtggaggccagagtagaatgtttacgaagt
atacaaacgttattagatgctgcagttgtacagatgcagcaatattcaaatactgtaaat
agaataggtgtttatattccaaatccctctagtaatccagtcaatatgagaaatgctccc
aatactcctccaccatcaccagcagctgaggatgtggcagatggtggtggaccagaaaaa
acaaacagtactttagataaagaagacacagcaccgctcaagaaagctaaaacttcatcc
cttgatttggccggactagaaggtgcgtcaggttacaccccacctacagagggagagtta
atcccggagtttgaaggtgaaagcccagatgaaaatgacaaggacggtatcaggaggaga
cggctgcagagacttcaaagtagttaa
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