Apostichopus japonicus (Japanese sea cucumber): 139971823
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Entry
139971823 CDS
T10891
Name
(RefSeq) scavenger receptor class B member 1-like isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03272
Virion - Hepatitis viruses
ajj04145
Phagosome
ajj04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
139971823
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139971823
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
139971823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ajj04131
]
139971823
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ajj04147
]
139971823
Membrane trafficking [BR:
ajj04131
]
Endocytosis
Phagocytosis
Scavenger receptors
139971823
Exosome [BR:
ajj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139971823
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
L_HMGIC_fpl
DUF3611
LapA_dom
DUF2678
Motif
Other DBs
NCBI-GeneID:
139971823
NCBI-ProteinID:
XP_071834674
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All DBs
Position
8:9488312..9517981
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AA seq
532 aa
AA seq
DB search
MRGCHHMANKSVQVKKWRWIFFVVLIAVGLVGAVCSVVLMPMMTEFIFDTVVTNMMVLNP
SSAIYPDWKDPPLPLYSSFYFFHVENPDAIVMNQRPVVAEKGPYVYRIEVPRANVTFHGN
GTLSSVQMYKYIFERSLSVGPETDTFTLINPVAVSTTILAKDFPKVVKRQLSLQMVELNE
TVFMNRSVAEILWGYEDGFISLANKYFNIPGWDTDLFGLLWGRNNSDLGVYTVYDGTEDQ
SMLNTFDRFNGRTELDWWFSPEANMLNGTDGTMYHPYISRDEKLELFHPDVCRSLPYLYE
KDMNFKGVPLFKFVLANYTYANGTVHPPNEGFYREDMWAPSGLLRQDPCRFGQPMALSNP
HFLDGDPILYEAIDGLSPNKDDHESYLAMEERMGMPYVFKLRLQINSLLEPVEDIRQVEN
VSRVYFPLVWFEQSVEVDDTIVSLYKKGFVTSEKVMDALQWFFFACGLILAAVSTYWFIR
WYRRRQLAKNEKELKGTEETDVEVFKKADVSEVEKQEDNLGFEEERMETGSS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagaggttgtcaccatatggctaataaatcggttcaagtgaagaaatggaggtggatc
ttcttcgtggttctcatcgccgtcggacttgtcggagctgtctgctccgtagtcctcatg
ccgatgatgacggagttcatattcgacacggtcgtcacaaacatgatggtgttaaatcct
tcctctgcaatctacccagattggaaggaccctcctttaccactctattcaagcttctac
ttctttcatgtggagaatcccgatgccatagtaatgaatcagagaccagtggtcgcagag
aaaggaccctacgtgtacagaattgaggtgccacgagcaaacgtaacgttccacggtaac
ggcaccctgtccagcgtgcagatgtataagtatatctttgaacggtccctgtcggtagga
cctgagacagacaccttcacgttgatcaacccggtcgcagtgtcaacaacaattcttgcc
aaagactttccaaaggttgtgaaaagacagctgtccttgcagatggtcgaactcaacgag
actgtcttcatgaatcgttcagtagcggaaatcctctggggctatgaggatggcttcatc
agtttggctaacaagtattttaatatcccaggatgggatacagatctgttcggacttctt
tgggggagaaacaattcagatctcggcgtctatactgtctatgacggaacagaggatcag
agcatgttgaatacatttgatagatttaatggacgaacagagctggactggtggtttagt
cccgaggcaaacatgctgaatggaacagacgggacaatgtaccacccttacatcagtcgc
gatgagaagttagagttattccatccagatgtttgcagatctttaccctatctctatgag
aaggatatgaattttaaaggagttccactctttaaatttgtcctggcaaactacacctat
gcaaacggtaccgtgcatccaccgaatgaaggattctacagagaggacatgtgggcacct
tctgggttgctaagacaagacccatgtaggtttggtcagccaatggcactgtccaatcca
cattttctcgacggtgacccgattctttacgaagcgattgacggcctgagtccaaacaag
gacgaccacgaaagctacctggcaatggaagagagaatgggcatgccatacgtattcaaa
ttaagacttcagattaattctttattggaacctgtcgaagatatcagacaagttgagaat
gtatctagagtgtacttcccactggtgtggtttgagcaatccgtggaagtagatgatact
atcgtttcattgtacaagaaaggatttgtgacatcagagaaagtcatggacgcattgcag
tggttcttcttcgcctgcggactcatcctagcggccgtctcgacttactggtttatacgt
tggtatcgccgtaggcagctagcaaagaacgaaaaagaactcaaaggcaccgaagaaacg
gatgtagaagtctttaagaaagctgatgtatcggaagttgaaaaacaggaagataacctt
ggatttgaggaagagaggatggaaacagggtcaagttga
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