Apostichopus japonicus (Japanese sea cucumber): 139971834
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Entry
139971834 CDS
T10891
Name
(RefSeq) DNA repair protein XRCC3-like isoform X1
KO
K10880
DNA-repair protein XRCC3
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139971834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139971834
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
139971834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
ATPase
AAA_22
RecA
DnaB_C
RNA_pol_A_CTD
HHH_5
Motif
Other DBs
NCBI-GeneID:
139971834
NCBI-ProteinID:
XP_071834707
LinkDB
All DBs
Position
8:complement(9566390..9580021)
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AA seq
336 aa
AA seq
DB search
MDELDLNPRILTALCKAGLKTYEDVLNLSTADIARSTKLTQSDSVTLRLAVSEKVYRQPK
LTALDIKNGNCPSMFSRKSLSLGCPILDEIFRGGILSQGITEVTGESAAGKTQLCLQLCL
MAQLPLEEGGLNGGAVYVCTEDVFPSKRLQQLIKSFPAQHKLERTKQLALGENIYVEHVA
EKEQLEHCINHRIPILLERGLVKLLVVDSVAALFRSEFELSEAFQRAKSLQKFGAQLHEL
ASRYNIPVVCVNQVTANMRALLPSDDPFVPALGLTWSNQVQTRLMLKRLPYKLPPSSDSN
PSCEIPVRSMEVIFSPYLPKDTIYFVVEGDGIRGLR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctagatttgaatcctagaattctcactgctttatgtaaagctggtttgaag
acttacgaagacgtcctgaatttgtccacggcggatattgcaagaagcacaaagctcact
cagagtgacagcgtcacattaagactggcagtttctgagaaagtatacagacagccaaag
ttaacagctttggacattaaaaatgggaactgtccttccatgttttctcgaaaatcactt
agtctgggctgcccaattctggatgaaatatttcgaggtggcatcctctctcaaggaatc
accgaagtgactggagaaagtgcagcagggaagacgcagctatgtcttcagttatgcctc
atggctcagttaccactcgaagagggaggattgaatgggggtgctgtctatgtatgtaca
gaggatgtctttccaagcaagcgtttacaacagctcattaaatctttccctgctcagcac
aaacttgagaggacgaaacaattggctctcggtgaaaatatatacgttgagcacgtcgct
gaaaaggaacaactggaacattgcataaaccatcgtattccgattctccttgagagaggc
ctggtaaagcttttggtggtcgactcggtagctgctctcttccgctcggagtttgagttg
tccgaggcctttcaaagggcaaaaagtttgcagaaatttggagcacaacttcacgagtta
gccagcagatataacattcctgtagtctgtgttaatcaggtcactgccaatatgagggcg
ctgttaccatccgatgatccctttgttcctgctctgggtctcacatggtccaatcaggta
cagaccagactgatgctgaagagattgccttacaagctaccgccatcgtcagattctaac
ccatcctgtgagataccagtacgttccatggaggtcattttctccccttacctgccaaaa
gataccatttattttgtcgtcgaaggagatggtattagaggtctgaggtga
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