Apostichopus japonicus (Japanese sea cucumber): 139973145
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Entry
139973145 CDS
T10891
Name
(RefSeq) nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139973145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139973145
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139973145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
RPN1_RPN2_N
D5_N
Motif
Other DBs
NCBI-GeneID:
139973145
NCBI-ProteinID:
XP_071835712
LinkDB
All DBs
Position
2:complement(89155..140141)
Genome browser
AA seq
1396 aa
AA seq
DB search
MALVAPSIGMLMESVPAVNQPLIQMAGEKFDTFLSKDRSYPELTHLLGVASSAQPSVSGT
SDLDYPSLAAPSVGLSELPLLTPIRQSPLPPELVEQYAHMQSNCMMGVFPEINRAWLTID
TDIFLWNYDDGSDLAYFDGLSDTIISAGLVLPKPNIFQNHIRFLLCLATPVEIILLGVSF
TRPHEDVDINDFGGSEMHLLPDPLFSIPSDNVNVLSIKAANNGRIFMAAKDGCLYELVYQ
ARDGWFSRKCRKVNHSSRSLSFLVPSFLTFSTEDPIVQMDVDDTRHIIYTRSEKGTLEVY
DLGPDGQSMSRAAYLTKPSILHQAIQTARTIDRTNFHEIVHIAAIKSNESRYIHLVAITH
SGVRLYFSTNHFDNFTYKSAHRPSTLALVHVRLPPGFSPNASAQRPTKVHAAHYSKGSTL
LCTGQAEGSFSLWCLSPDAFPFQANLMETQVNYPIDTFTWVIAEVKARPSIDYAVETSRG
TRQLLAPEPNPPAVVEQHTQSSSKYILLSSQGSYVVTRLRPVDQLRQLMLNNSGPDCREV
ENFFRLHKDDQACATCLILICSQDSTDAQTSEWASQAFFAFGGEARLRLGLDQTPAANLG
PAFGSTTPVVGPGHTSMVGSPGPFSHSMRPTVASTPFSGGQRPDGQFFPEDSDAVLYSGR
FRGLSLYFARIVRFMWENKLTLDVVMQGYGPQQHKVLDLAFERSELSWVLEEVKALKAFM
EKHSQLSAVVESFQLATPGIVQASYARPDSVLGGRPSSQLQREQDQRLKEEAEILEREAL
VAIFHLISRTSECLALLQLLCYHQFHVVTSNLPRELQDQLRAMTLRDLVLHGADTCNIMI
NALINRYIGDNSTTDAISSKLRDLCPSLYSRDDAIATKATELLQAAMSAETRSNKEEMLQ
EAQELFKQVNQQLNLPAICQEFHQARFYDGVVDLCLAAAVKQDPSNLALHYYKNGKPPSD
HQGMQAFSARYECYKSITDILDELLTTSTAATASPVPARPGPPLSPDPHRLTREEAERYL
EDMMRKCLSSDDELFHVALYDWLIDTGLKERLLEISSPFVEPYLQRATQYEPDDLQMMDL
LWMFYDKSRNFPSASRILSKLAERRTIDLTLQQRIEYLSRAVMCAKSSSLRTSSASEGEF
LYDLEEKLEVARLQLQVFEAITRNHDISDPQVRDAVTQLNAELMDITRLYGDFADRFDLS
ECKLAIVFSAGHSDLELVQSLWKEILDKEFEGTAGKPPASRSTIISNKLISQGKIYITSE
RYFPLEFLVSYLEKKNCQFELNPQWVFQSFLDIGISLQKLHLVYDRLFKAKNPSWQTSRN
PFHLLGAISELLEKFCQRPAHVSGLERRQFVTLCLDAIAGYKVELEATTGRPQVKRRLLE
KFAELQYRLERMLRNP
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggctctggtggctccttccatcggaatgctgatggagtcagtccctgctgtaaaccag
cctttaatacaaatggcaggggagaaatttgatacctttctgtccaaagatagaagctac
ccagaactaacacacctgttaggagttgcatcatcagctcagccctctgtgagtggaacc
tccgatttggattatccttccttagcagcgccatctgtcggtctctcagaattgcctctc
ttgacaccgatacgccaaagcccgctccctccggagttggtcgaacagtatgctcacatg
caaagcaactgtatgatgggagtgtttcccgaaataaatagggcttggctgaccatcgac
acagatatatttttatggaactatgacgatgggtctgacttggcgtatttcgacggtctc
agcgacaccatcataagtgcgggactggttcttcccaagccaaacatctttcaaaaccac
atccggtttttactctgtctggcgactccggttgagatcatcttgctcggtgtcagcttt
accagaccccacgaagatgttgacatcaatgactttggcggctctgaaatgcacctcctt
cccgatccactcttctcgataccatcggacaacgttaacgttctcagcataaaagccgcc
aacaatggacggatcttcatggctgccaaagatggatgtttatacgaacttgtttatcag
gcgagggatggctggttcagccggaaatgtcggaaagtcaaccattccagcagatctctg
tccttcctggtgccttcttttctcacattttcaacagaagatcccatcgtgcagatggac
gtagacgataccagacatatcatctacacccgctcagaaaaaggaaccctagaagtttac
gacctcggccccgatgggcagtcgatgagtagagcggcgtacctcacgaaaccatccata
cttcaccaagcgattcaaacagcaaggacaatcgatcggaccaacttccacgagatcgtc
cacatcgcagccataaagagcaatgaatcgagatacattcatttagtagccatcacacat
tcaggcgtgagactttacttttctaccaatcattttgacaactttacctacaagtctgct
catcgaccatccaccctggcgttggttcacgtccgtctgccgcccgggttttcacctaac
gcatcggcacagagacccacaaaggtccacgcagcacattacagcaaaggatcgacactt
ctatgtaccggccaagcggagggttctttctctctctggtgtttaagtccagatgctttc
ccctttcaagctaatcttatggaaacacaagtgaattatcctatagacacttttacctgg
gtgatagccgaagtgaaagctcgtccctccatagactacgcagtagagacctcgaggggg
acgagacaacttctagccccagaaccgaatcctcctgcagtcgtcgagcaacatacacaa
tcctcttcgaaatatatattacttagttctcagggatcttacgtggtgacccgtctacga
ccggtggatcagttgcgtcaactcatgttgaacaactctggtcctgattgtcgagaagtg
gagaattttttcaggttgcacaaggatgaccaagcctgtgctacatgtctgattctgatc
tgttctcaagattctactgacgctcagacctcagagtgggcttcccaagctttctttgcc
tttggcggagaagcgcggttgcggctaggtcttgatcaaacaccagctgctaatttagga
ccggcatttggcagcacaacacctgttgttgggccaggccacacgtccatggttggttcc
ccaggcccgttctctcatagcatgagacccacagtggcgtccacccctttctcaggcggc
cagagacccgacggtcagttcttcccagaggatagtgacgcagttctctactctggtaga
tttaggggattatccttgtactttgccagaattgtgagatttatgtgggaaaacaagctg
acgttagatgtagtaatgcaaggctatggaccccaacagcataaagtgcttgacctggct
tttgaaagaagtgaactcagttgggtcttggaagaagttaaagcactaaaggcatttatg
gagaaacattctcaattatcggcagtcgttgaaagtttccaactggccacaccaggtata
gtgcaggcatcttacgccagacctgattctgttcttggaggacggccatcttctcagctg
caaagggaacaagatcaaagattgaaagaagaagcagaaatattggaaagagaagccctg
gttgcaatattccatctcatttctaggacaagtgaatgcctagcactgctgcagttactc
tgttatcatcagtttcatgtggtgacatcaaacttacccagggagctgcaagatcagctt
agagcaatgactctgagagacctggtcctgcatggagcagacacttgcaacattatgatc
aatgccctgatcaatcgatacatcggcgataacagtaccactgatgctataagctcaaag
ctgagggatctctgtccttctctatacagtagggatgatgccatagcaacaaaggctact
gagttattacaagctgccatgagtgcggagacaagatctaacaaagaagagatgttacag
gaagcacaagagcttttcaagcaagtaaaccaacaattgaatctaccagcaatatgtcag
gagtttcaccaagctcggttctacgacggcgtcgtcgatctgtgtctggccgcagctgtc
aagcaggatccatcaaaccttgccctccattattacaagaatgggaaacccccgtccgac
caccaagggatgcaggcattctctgctaggtacgaatgttataaaagcataacggacatc
ctagatgagctcctgaccacgagtacagcagccacagcctccccagtaccagctagaccg
ggtcccccactctcacctgaccctcatcgactcacaagagaggaggcagagagatatctg
gaagatatgatgaggaaatgtttgtcgtcagacgacgaactctttcacgttgctctgtac
gattggctgatcgacacaggtctgaaggagaggctacttgagatctcttccccctttgtg
gaaccctacctccaaagggcgacccagtacgaacccgacgatctacagatgatggatctc
ttgtggatgttctacgataagagccgcaatttcccatcggcgtcgagaatcctgagcaaa
ttagcagaaagaagaacaattgatctaaccctacaacaacgaattgaatatctctcacga
gcagtgatgtgtgccaagagcagcagtctgaggaccagctcggccagcgaaggagaattc
ttatacgacctggaggagaaactggaggtcgcacgtctgcagcttcaagtttttgaggcc
atcactagaaatcatgacatttcggacccacaagtccgagacgcagtaacgcaacttaat
gccgaattgatggatattacgaggctctacggagactttgccgatcgctttgatctctca
gagtgtaaactggcgatagtcttctctgctggtcactctgatttagaattagtgcagtct
ctatggaaagagatcctcgacaaagaatttgaaggcacggcggggaaaccaccagctagt
cgatccaccatcatctccaataagttaatttctcaaggaaagatctacattacttccgag
cgatattttcctcttgaatttttggtgtcctatctcgagaagaagaattgtcagtttgag
cttaatcctcagtgggtattccagagctttctagacattggaatatccctgcaaaaactt
cacctggtctacgataggctcttcaaggctaagaatccttcctggcagacatctcgaaat
ccattccacttgctgggagcgatttcggagctcttagagaaattctgccagagaccagct
cacgtcagtggactggagagacggcagttcgtgacactgtgcttggatgccatcgccggc
tacaaagttgaattggaggctaccacgggccgtcctcaggtcaaacggaggctactagag
aaatttgccgaacttcagtacagattggagaggatgttacggaacccctga
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