Apostichopus japonicus (Japanese sea cucumber): 139973202
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Entry
139973202 CDS
T10891
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ajj04040
]
139973202
Ion channels [BR:
ajj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139973202
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
139973202
NCBI-ProteinID:
XP_071835810
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Position
9:7227522..7275402
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AA seq
1220 aa
AA seq
DB search
MKDKGWNRVLKSAWRLERRDERDTNNPPLDDLPLVDQKMRPKNKVTASPEKSLDHVSMEE
VKRDLNNPARFITSKREINTPSEQSLLCPIEIVSKSLPDFEQEVQESPCLVVSRDIRCAT
LLHHVAKLGKRDLVECLLRYQADINAVDVDNSTPLHWAVESDDPEIIDLLVAAGADIHHR
NLPQMTPLHLACDMNKSRAVEALCKSPTCDVNVRGENGQVPVHYCAIKDSYEAAQKLIEF
KPMLCFKDNYGVFPIHCAATNASRRVLDLLLTEAAKCGYTRAQLLSFTDKEQNTPLHAAV
NGGCIDAIRVCLEFGAPLDVQSDTNCTPLHLACSQGALDIVTMMLKMKKSPKTLNMLDMD
NMTPLHRAAMFDHVDIVDFMLDEGADMEALDNDQRTPLLLAASRSAWEATVTLVRRGADY
KARDVDNKNVLHLAVRSGGNLDVIRKADIFERSDFLELLNEKDMYGCAPIHYATKGGNIK
SVQGLIDLGATVNLRDNKKQSPLHFAARYGRYNSCKKLLDSVIGYKIINDSDNDGRTALH
LAALNGHRKVVLLLISRGALIHRDFHGRSPLHLAASNGYTETMESILSTHSYLLDQTDDD
GDTPLLGAARENQISSVKYLVGHGAAFTVNTNGEDIMDIIFANQNTEVAMAIISHDRWTE
VLLPPKEENRTPIGRLIELMPDVFLKVLDRSLIKSEVDVRSPDYWYKYDFRYLQPSQDER
LDEKKKATEDLSYLPALNVMVNFNRVDLLSHPVCVKYLEMKWKAYGFYVHMSNLLLYFVF
LGLLTYFICTVNQDPSQTACNWTVYSQWPQKGCQTPSQRVALCVIAVFAFLNIIKEVFQI
FSQGLRYFLEAVNYSEWVLYSSTLAFALPFLLPEGLLRLEWSFGAIAVFSAWYNLMLYLR
RFDSVGIYIVMFMEIFKTLLHVILVFLVLIIAFAMAFYILMSQETNRAFSTAPMSILRVI
TMMAGELDFINSFLGPATDDDDSTLRFETLTFIFLIALILLLPILLMNLLIGLAVGDIAT
VQKDAQLKRLAMQVELHTDLEQKIPHWILRRIDRMSVTVYPNKVCGLDSGMASKSWMYLK
KKAGLVGEDIGSHKLDTEHKKKMQEFDKMRVRVKKIAAQQEKQYELLKLIVQKMEIQTEA
DEQDEGDANPFMGKNGGTCLRPRLTQVVRDTLAKVAFKSMLPQRHTTYLGLDSSANSTPI
LLSARSSPESVRSNPPEPQV
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaaggatggaatagagtccttaaaagtgcttggaggcttgaacgaagagac
gagagagacacaaataatcctcctcttgatgacttaccactcgtagaccagaaaatgcgt
cctaaaaataaagtcaccgcctcgcccgaaaagagtctggaccatgtatcaatggaggaa
gtgaaaagggacttaaataatccggcaagattcatcacctcaaagagagaaattaatacg
ccatcagaacaaagccttttgtgtcccattgagatagtgagcaagtcgttaccagacttc
gaacaagaagtacaagaatctccgtgtctggttgtatctagggatattagatgcgctaca
ttgcttcaccatgttgccaagctcggaaaaagagacttagttgagtgcttactgaggtac
caagcagatatcaacgcagtagatgtagacaactcaacaccacttcactgggcggtggag
agtgatgatccagaaataatcgacttactggtcgctgctggcgctgatatccaccatcgc
aatttgccacagatgactccattgcaccttgcatgtgatatgaataaatctcgcgctgtt
gaagctctctgtaaaagcccaacatgtgacgtcaatgtacgaggagagaatggacaggta
cctgtccactattgcgccattaaagacagctatgaagccgcccagaaactgattgagttt
aagccgatgctgtgcttcaaggacaattacggagtgtttccgatccactgtgccgcaacg
aatgcgtccagaagagtgctggaccttctcctaactgaagctgccaaatgtggttacacg
cgagcccaattgttgtctttcaccgacaaggagcaaaatactccactccacgcggctgtc
aatggaggctgcattgatgcaatacgtgtttgcttagagtttggagccccactggatgta
caaagcgatacaaactgtacgccccttcacctggcttgctcccaaggtgccttggatatc
gttacaatgatgttaaagatgaagaaatcaccaaagacccttaatatgctggacatggat
aatatgacacctctgcacagagcagcgatgtttgatcacgtggacatagtggactttatg
ttagatgagggtgctgacatggaagcccttgataacgaccagcggactcccctcttgctc
gcagcatctcgttcagcgtgggaggcgacggtaacgttagtgaggagaggagctgattac
aaggctagggatgtagacaacaaaaacgtactgcatttggccgttagaagcggtggtaac
ttggacgttatccgaaaagcagacattttcgagcgttccgattttttagagcttcttaac
gagaaggacatgtatgggtgtgcccccatccattacgccacaaagggtggtaacattaag
tccgtacaaggactgatcgatcttggggcgacagtgaacttgagagacaataagaaacag
tcgccactgcatttcgctgccagatatggtcgatataactcttgcaagaagctgttggac
agtgtgattggatataagataatcaacgattctgacaacgatggacgcactgccctacat
ttagcggccttgaatggtcaccggaaagtagttcttttactgatctcacgaggggcactc
atacacagagatttccatggccgatccccgctgcatcttgctgcgagtaacggttacacg
gaaacgatggaatcaatcctgtcaactcacagctacctcttagaccaaaccgatgacgat
ggggacacgcccttgcttggtgctgcccgagagaaccagatctcatcggttaaatacctg
gtgggacatggagcagcatttactgtcaacactaacggagaagacataatggatatcatc
tttgcaaatcaaaatacggaggttgctatggctattatttcacatgacaggtggactgaa
gtcctgttgccaccaaaagaggaaaatcgcacaccgataggacgccttatagaactgatg
ccggacgtgtttctgaaagtactggaccgaagcctcatcaaatctgaagtcgatgtccga
agtccagattattggtacaaatatgattttcgatatttgcaaccttctcaagatgaacga
ttggatgaaaagaagaaagcaacagaggatctctcatatttaccagcattaaacgtaatg
gttaatttcaaccgcgttgatctcctctcacatccggtttgtgtgaaatatttggaaatg
aagtggaaagcctatggattctacgtgcacatgagcaatctgctcctgtacttcgttttc
ctgggacttttaacatatttcatctgcacggttaaccaagacccatcacagactgcgtgt
aactggacagtgtattcacagtggccgcaaaaaggatgccagactccatcacagcgtgta
gccctttgcgtgatagcggtctttgcctttttgaacatcataaaggaagttttccagata
ttctctcagggactgagatatttcttggaagcagtcaactattctgagtgggttctttac
tcatccaccttggcattcgcactaccgttcctattgccggaaggattattacgcctcgag
tggagttttggagctattgccgttttctcagcttggtacaaccttatgctgtacttgcga
cgatttgattccgttggtatctacattgttatgttcatggaaatctttaagacgctgttg
catgtcatcctggtgttcttggtcctgatcattgcctttgctatggcgttctacatctta
atgtcacaagagacgaaccgtgctttcagcactgcaccgatgtcaattctgagagtaata
acaatgatggcgggagagcttgactttatcaattcctttcttggaccagccacggatgat
gatgacagcacacttcgctttgagactttgactttcattttcctgattgctctcatcctg
ctcctaccaatcctcttaatgaatttgttgattggtcttgcagttggtgacattgccaca
gttcaaaaggacgcacagcttaaaagacttgccatgcaggtagaacttcatactgacctg
gagcaaaaaataccacattggattttgcgtagaatcgatagaatgtcggtcaccgtgtat
ccgaataaagtgtgcgggctagattccggaatggcatccaagtcatggatgtaccttaaa
aagaaggcgggactcgttggtgaagatattgggtctcacaaattggatacagagcacaag
aaaaagatgcaagaattcgacaaaatgagagtgagagtgaagaaaattgcagctcagcag
gagaagcagtacgaacttttaaagttgatcgttcaaaagatggagatacaaacagaggcg
gatgaacaagatgaaggtgatgctaatccattcatggggaagaacggaggaacctgtctg
cgccctcgcttaactcaagttgtacgggatacccttgctaaggtggctttcaagtcaatg
ctgccgcaacgtcataccacatatttgggattagattcatcagccaacagtaccccaata
ctactttcggcaaggagtagcccggaaagcgtccgtagcaacccaccagagcctcaagtg
tga
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