Apostichopus japonicus (Japanese sea cucumber): 139973413
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Entry
139973413 CDS
T10891
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ajj03016
]
139973413
Enzymes [BR:
ajj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
139973413
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
139973413
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
NICE-1
Motif
Other DBs
NCBI-GeneID:
139973413
NCBI-ProteinID:
XP_071836185
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All DBs
Position
2:1296864..1309644
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AA seq
437 aa
AA seq
DB search
MQVDQQVKGTNQCAFHVEKRKRQCKLQVAKGLQYCGEHAFQHNLPTSKPRIQCPLDPKHS
VFVHKLKKHLKICNSRPKDKPIYFEQNINIDQCEENYTGKKELASFTPQEVENIIKKAKA
VQQGQLLEFQESVLHHEVLKAELDSAINGLSARKHLDQISSILGNMKEAKLFAPNTFYIE
YGAGKGRLSQWIFEAVSDTPDTHFILVDRKNVRHKRDLHHKEVRKNLSMERLLIDIQDLA
LNRVPAIKDNPDRPIVAYCKHLCGAATDLALRSLFPHRLDRREDDQKTPTDSPSVKGVAM
ATCCHHCCTWNSYVGKDFLAVHGFSRIEFEALIRMSSWCVCGTRSEHGEEKMETKSDSQN
GEAEKETLTSALGLTIQQREEIGHMCKRVLDAGRLEFLRKNGLTGNQVQYVKPSVTLENI
MILANRREENSDTLPNA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtagatcaacaggtaaaaggtaccaatcaatgtgctttccatgttgagaaaaga
aaacgtcagtgcaaattgcaagtagctaagggtttacagtactgcggcgaacatgcattc
caacacaatttacctacatcaaaaccaagaatccagtgccctctggatccaaaacattca
gtatttgttcataagttaaagaaacatctgaagatttgcaatagcagaccaaaagataaa
ccgatttatttcgaacaaaacatcaatattgaccagtgtgaagagaattatacaggaaag
aaagaactggcatcttttactccacaagaagtagaaaatatcatcaaaaaagcaaaggct
gtccagcaaggtcaacttttggagtttcaagaatctgtgctacatcatgaggtgctcaag
gcagagctggattcagcgatcaatggactgtcggcacggaaacaccttgatcagatctca
tccattctaggcaacatgaaagaagccaagctgtttgctccaaacaccttttacattgaa
tatggagctggcaaaggtcgactatcgcagtggatttttgaggcagtcagcgacactcct
gacactcatttcatcctcgttgaccgcaagaatgttagacataagcgagatcttcatcac
aaagaagtcagaaagaacctctctatggaacgtctccttattgatattcaagatttggca
ctcaacagggtaccagcgatcaaggataaccctgacagacccatagtggcatactgcaag
catctctgtggggctgcaacagatctggcactcagaagtttattcccacatcggttggac
cgccgggaagatgaccagaaaacaccgactgacagcccatcggtcaaaggcgttgctatg
gcaacatgttgtcaccattgttgtacctggaatagctatgtggggaaagacttcttagcc
gttcacgggtttagtaggatagagtttgaggcactcattcgaatgagtagctggtgtgtt
tgcggaacaaggtcagagcatggagaagaaaagatggaaactaaatccgacagtcagaat
ggtgaagcagaaaaagaaacacttacaagtgctcttggattaaccattcaacagagggaa
gaaattggacatatgtgtaaaagagtcttagatgctggacggctagaattcctccgcaag
aatggcttgaccggtaaccaagtgcaatacgtcaaacctagtgtcaccttggagaacatc
atgatcttagccaataggagagaggaaaacagtgacacgctaccaaacgcatga
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