Apostichopus japonicus (Japanese sea cucumber): 139973529
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Entry
139973529 CDS
T10891
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1-like isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139973529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ajj03009
]
139973529
03016 Transfer RNA biogenesis [BR:
ajj03016
]
139973529
03029 Mitochondrial biogenesis [BR:
ajj03029
]
139973529
Enzymes [BR:
ajj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
139973529
Ribosome biogenesis [BR:
ajj03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
139973529
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
139973529
Mitochondrial biogenesis [BR:
ajj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
139973529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_N
POP1_C
POPLD
Permuted_GreAB-C
Motif
Other DBs
NCBI-GeneID:
139973529
NCBI-ProteinID:
XP_071836366
LinkDB
All DBs
Position
9:278332..294963
Genome browser
AA seq
820 aa
AA seq
DB search
MEGLNTIEGIPKHFNPKFIDCTRFVKARAKEIRSIQNDLPAVTKNTQALGLPKHMRRRSM
SHNVKRLPVRLRRAAEHRMTKSLANANKKTKAKAASRRQKRRPKNLREKFEKRQGDKVWL
ETHLWHAKRFKMAQQWGYKLPLHPCDKGVRAAYRSTVKHCTIQEISFYEVIEVKGRQENI
IESLCQLTCPETGLTLGAEMYLSGQHHGETMLYHKGTFPYGAITKVQFLWQCLTLTDPIK
DESTSAAPSADRKLWMWVHPSAFSEVLDAIKVIIESDSIKVNDLRGELLRFRLRGPQATA
VVTDAFKVSSIPPKSDTESEGSFWWQDKICQNPNLMTIHEQQSHFWKSLESIQSTTALPS
RCVVGLTVRDPRILLPKQRHKVETDPLKADYSLPRCPQPGAQHAVSHIWDGSIRESLGST
MLSTHTINEHRRNLLVPGSELDLGNQESRIPVLLLQSPGVQHDNLATSSHEMVSPLGFGG
GWDVVLPKKWGTVFWVGFVFRGARAVGLKESDNTCLHQGQPRLPEEYPDTKSGQEIEEIR
AKDLEASFLRRPPAKRPNYAKLGFLSPFKCPWDRLLSEWTSKYDLNDNQQLGLNDSQQLG
LNDNQQLGLNDSQQLGERNGGATQLLSGLPDFYILRNRAHLRQLRSIFLTAAKNQAGSKG
PVVTGGPSSKDLHQLDQRALVWIRVDLLQRGSPEAFSMICLPKPCDLEALNLKKPNPAPE
ETIKNKFKLDKKQKIGKPKPENKVTLEEKVANANLLELNSRIIIGFVTNGGHVFSRGKGH
AVGFCCLPGLLQLVKESVNYVLVRDSNSTKYRFATLTVLE
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggaaggattgaatactattgaaggcattcctaaacattttaatcccaagtttattgac
tgtactcgattcgtgaaagcccgagccaaagagatcagatccattcagaatgacctccct
gctgttacaaagaacactcaagcactgggacttcccaagcacatgagaaggaggtctatg
agtcataatgttaaacggctccctgtaagactgagaagagctgctgaacatcggatgact
aaatccctggccaatgctaacaagaagacaaaagctaaagcagcatctagacgacagaag
aggaggccgaagaatctgagagagaaatttgaaaaacgacagggtgacaaagtttggctt
gagactcatctttggcatgccaaaagattcaagatggcccaacagtggggttacaagtta
ccactacacccatgtgacaagggtgtcagagctgcatatagatcaactgtgaagcattgc
acaattcaagaaatatcattctatgaggttatagaggtcaagggtagacaagagaacatc
attgagagcttatgtcaattgacttgtccagaaacagggttaaccctaggagctgagatg
tacctctctggacagcatcatggtgagaccatgttataccacaaagggacattcccatat
ggagcaatcaccaaagtacagtttctgtggcagtgtcttacccttacagatccaatcaaa
gatgaatcaacatcagcagctccctctgcagacaggaagctttggatgtgggtgcaccct
tcagcctttagtgaagtgcttgatgcaatcaaagtgatcatagaatcagattccattaag
gtcaatgacctcagaggtgagctgcttagatttcgtctgcgagggcctcaggctactgca
gtagtcaccgacgcatttaaagtctccagtattccaccaaagtcagacacagagagtgag
ggaagcttctggtggcaggacaagatatgtcagaatccaaacctgatgactattcatgag
caacagagtcatttctggaaaagtttagagagcatccagtcgactacagcacttccctca
agatgtgtagttggcctgacggttcgagacccgagaatcttactaccaaaacagagacac
aaagttgaaactgatcccctgaaagcagactactcacttccaagatgtcctcaaccagga
gcccagcatgctgtctctcatatctgggatggaagcatcagagaaagtctgggatccacc
atgttgtctacgcacaccatcaacgaacacagacggaatctccttgttcctgggtcagaa
ctggaccttggcaatcaggaatctagaatacctgtactcctcctccagtcacctggcgtc
cagcatgataacctagcaacctcctctcatgaaatggtttctcctcttgggtttggcggt
ggctgggatgttgtgcttcccaagaaatggggaactgtcttttgggtcgggtttgtgttc
agaggagccagagccgttggactgaaggagagtgataatacatgccttcatcagggtcaa
cctcggctgccagaggaatatccagacaccaaaagtggtcaggagatagaagagatcaga
gcgaaggatctagaggcttcatttctgagacgaccacctgcaaagcggccaaactacgct
aaactggggtttttgtctccctttaaatgtccttgggatagacttttgtctgaatggaca
agtaagtatgaccttaatgataatcagcagttaggcctcaatgacagtcagcagttaggc
cttaatgacaatcagcagttaggccttaatgacagtcagcagttaggagaaaggaatggt
ggtgcgactcagctattgtcaggtttgccagatttctacatactgaggaacagggctcat
ctcagacaattacgctcaatctttttgactgccgcaaagaatcaagccgggtcaaaaggt
ccagtagttactggtggaccatccagcaaggacctgcaccaacttgaccagagggctctc
gtctggatcagggtggatttgctccagaggggatcacctgaggccttttcaatgatttgc
cttcccaaaccatgtgacttagaagctctaaatttgaagaaaccaaaccctgcaccagag
gagacaatcaaaaacaaatttaaattggataagaaacagaagattggcaaaccaaaacca
gaaaataaggtaacattagaggagaaagtagccaatgctaatctcttggagttaaactct
aggataatcataggctttgtcaccaatgggggacatgtcttcagcaggggcaaaggtcat
gccgtaggattctgctgtctgccagggctcttgcagctggtgaaagaatctgtcaactac
gtgcttgtaagagactcaaattcaaccaagtatcgatttgcaactcttactgtgttagaa
tag
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