KEGG   Apostichopus japonicus (Japanese sea cucumber): 139973586
Entry
139973586         CDS       T10891                                 
Name
(RefSeq) mRNA export factor-like
  KO
K14298  mRNA export factor
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ajj00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    139973586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ajj03019]
    139973586
   03036 Chromosome and associated proteins [BR:ajj03036]
    139973586
Messenger RNA biogenesis [BR:ajj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     139973586
Chromosome and associated proteins [BR:ajj03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    139973586
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_Aladin Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd eIF2A WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_ACSF4 Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_RSE1_2nd Beta-prop_WDR75_2nd NBCH_WD40 Beta-prop_Nup120_160 ExoI_SH3
Other DBs
NCBI-GeneID: 139973586
NCBI-ProteinID: XP_071836485
LinkDB
Position
9:22315362..22331773
AA seq 362 aa
MAFQFGGSQQPTSLFGQNQSKSKDFEVTSPPDDSISALAFSPATVPLTFLVAGSWDNKVR
CWEVQNNGQTIPKAEQMHTGPVLDVAWHDDGTKVFTASADKQAKMWDLNSNQAIQVAQHD
SPIKVIKWIKAPNYSCVMTGSWDKTLKFWDTRQPQPMLSLQLPERCYCADVMYPMAVVGT
ADRNVIIYQLDNQPSEFKRMESPLKYQLRCVSIFKDMKKNMPTGFALGSIEGRCAIQFVQ
AQNPKDNFTFKCHRSNEASTYYQDIYAVNSIAFHPEHGTLATAGSDGKFSFWDKDSRTKL
KTSEQMEQPITCCNFDAKGQIFAYAVSYDWSKGHEFFSTQKKNQIFLRGNASEDLKPRNR
KR
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggctttccagtttggtggcagtcaacaacccactagtctgtttggtcaaaatcagtct
aagtctaaagattttgaagtgacctcacccccagatgacagcattagtgcactagcattc
agtccagctacagttccccttacattccttgtggctggctcttgggataacaaggtacga
tgttgggaagttcagaacaatgggcaaacaattccaaaagcagagcagatgcacaccggg
ccagtcctggacgttgcctggcatgatgatgggaccaaagtcttcacagcgtctgcagac
aagcaagccaaaatgtgggatttaaacagtaaccaagctatccaagtagcccagcatgac
agtccaatcaaagtcatcaaatggattaaagcgcccaattactcctgcgttatgactgga
agctgggataaaactctcaagttttgggatacaagacaaccccagcctatgctctcctta
cagctcccagagagatgttactgtgctgatgtgatgtacccaatggcagttgttggaact
gcagacaggaatgtaatcatctatcaactggataatcaaccatccgaatttaagagaatg
gagtccccattaaagtaccagctgagatgtgtctcgatattcaaagacatgaagaagaac
atgccaactgggtttgccttaggaagcatcgaagggaggtgtgccatccagtttgttcaa
gcgcagaaccctaaggacaattttacttttaaatgtcaccgctctaatgaggcttctact
tactaccaagatatttatgcggtgaactccatcgcgttccaccccgaacacggtaccctg
gcaacggcaggctcggacggcaagttcagcttctgggataaagattccaggactaaactg
aaaacctctgaacagatggaacagcctataacttgttgtaactttgatgctaaaggtcaa
atatttgcatatgcagttagctatgactggtcaaagggacatgaattcttctctactcaa
aagaaaaatcagatcttcctccgaggaaatgcttcggaggatttgaaaccgaggaatcga
aagagatga

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