Apostichopus japonicus (Japanese sea cucumber): 139973913
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Entry
139973913 CDS
T10891
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03013
Nucleocytoplasmic transport
ajj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139973913
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139973913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139973913
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139973913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Nup153
Motif
Other DBs
NCBI-GeneID:
139973913
NCBI-ProteinID:
XP_071836900
LinkDB
All DBs
Position
9:14918255..14946295
Genome browser
AA seq
1636 aa
AA seq
DB search
MASSGGGKLKSKRTRGAKKPYQRPKSILSHMTDAVTGVVPTWMKSMFTKNEEEKDSEVVS
EPASPDFDPDAPSTSYGTGYPPVQRTHAVEVNEEDASHRSQHRKREEEEEAIQMGIPQRK
HTPLPFIAYTQPIQTSTPVDNDFIQQPLRNVQTEERDDETDSSVSTSGCSSLLPHVDRAD
HKEKIAKSNLEQLSEWGQSSTSTPSRMSLWSDTNTLASQSHRGSRQVESKPQPAAKRPRF
NASYFGTPRQNTTLTSDDRHQSSFYIGRTTFGGMSSYRSPAARKKYNPSPYQVHLPVKRH
IRPKPAAQTRMDPDFGVTSNTAMKILNTLDRMSTPLSDAKRIPLTPTPSPFAYKPRRVAA
SERHKPVGGPPVSGLQIGERAKVIPNTQPPLPKYPASSSWVSESATVASTAPPLSTAQPS
NSNTHWTPVASVAPASNFKPQKSTPVPPSSPPKSGGKMKSKSRNPLHYSASRANEDEVVE
VPDLPNIALPIGKKGLPSFNFGDPQSKPSPAVTPFSLFGSPANGGPKKPASSLPPAYGGQ
GGRSNFVEDTPAAPSKPNANPTSQVTPMMTSTPFPGNFTAPQFKFSTPQAKQEEEGSGIN
FTFSEPAVKGSSFGKDSLPTKAAEGEFTFSAPSQKVSLMGSGKDAAGLLFSKPVENEDQK
VAEEEEDDSSGGIKVARSLKSGSCLQILGIGSSKPVTTSASPKKTQDTSSASSVFDKFKP
AVGSWECDTCLVRNGKESLKCVACQADKPGAKTTSLAEKFKPAPGSWECGTCLIRNNAGV
DKCIACSSSRPVSSENKTNDDTTLSLSEKFKPPIGSWECDTCLVRNKAEATNCVACSSER
PGGVEKANSQQGSSNSKSLAEMFKPPAGSWSCETCLIQNQAKDTKCVACQSLKPGAKASQ
EQSQTKGFSIQGTEFKLATPLSFGSKLKDNESTAKASASVKPSLSEMFKPPEGSWECDTC
LVRNKPASSRCVACETPKPGSEPALRAPPASSFKFGSSTSSESATSTQGFKIAGSIPSFL
SSGTTLGNGGFKIDSGTTPTDNGNPSVGFKLPPGVNFGSIGGTSNQLSGATSSDAVSSSG
GFSLGSVRDKDTLGGGLSFQPPKDLGDSSKVADSSAPLNIGFKFGESNEDGKNKKSTTFT
FGASSTTDETDKLSGTGAATLAGGAGIVEKKDQTVVKTAADATNQSSGLGFQFGAKLSEP
LQSSVKATPNVNPFQSNLTSTGSKPAFSFGAPVSSESKPSASVANAVNTNQSSSSSSLDT
TNALPTFQFGSTQKSNQPLQQAVRLGKRKESEPSSTSVEKPAFNFAGSNPSGPPVKFGMP
SASSGLPKPGLTFGASKTPGTSNPQTNASPFQFGAQPKSDLPPAQTSSPFAFGAKPQQSQ
VPVSNASGFQFGMVSSSSQNSQKPEKKPFTFGAVTTSSQSAAGSFTASKNFSGFDSAGTG
PTKSAVPSFGGTASGFGSSAAPLNNSASASLFGGQQNSTPVFGQSTLQQNSFGATTNAVP
TFGAGTSGGPAFGGPVPAFGSNSQPNANNTGFAVDAKGPTFQFGQNNNNNPSTGAFTFGA
NPTPPPSANTNQGGFKFNASQAPTFNFGAAAAPPASNSTAFQFSAAPTTEVNPFNASAPP
SGRKIKKAVRRTNRKT
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctctggaggaggcaaattaaaaagcaaacgtactcgtggagctaaaaaaccg
tatcagcgacctaagtcaatcctgtcacacatgacagatgctgtcacaggggtggtaccg
acatggatgaagagtatgtttacgaaaaacgaggaggaaaaagatagtgaggtagtatca
gaaccagcgtccccagattttgatcctgacgcgccttcgacctcttacggaaccggctac
cctcctgtccagaggactcacgctgttgaggtgaacgaggaagatgcaagtcatagatca
caacacaggaagagggaagaggaagaagaagctatccagatgggaattcctcaaaggaag
cacactcctttacctttcatagcttacactcaacccattcagacttcgacaccagttgac
aatgacttcatacaacaaccgttgaggaacgtgcagactgaagaaagagatgatgagaca
gattcttctgtgtcaaccagtggatgttcctctctactgcctcatgtggacagagcagat
cataaagagaaaatagccaaaagtaatcttgaacaactttctgaatggggccagtcatcc
accagcacacccagccgtatgagcctctggtcagacacgaatactttggcttctcagtct
cacagagggtcacgccaagtagagtctaagcctcaacctgcagcgaagagacctcgtttt
aatgcctcttactttggcacaccaagacagaatacaactttaacatcggacgacagacac
cagtcctctttctatatagggagaacaacttttggtggaatgtcatcttacagatcaccg
gcagccaggaaaaagtataacccatcaccataccaggtccatctgccagtgaagcggcac
atcaggcccaaaccggctgctcagaccagaatggacccagactttggcgtgaccagcaac
acagccatgaagatacttaatacattggacagaatgtcaacaccgttatcagatgcgaag
aggatacccctcaccccaacgccatctccgtttgcttataagcctcgaagagttgccgct
tctgagaggcataaaccggtcggtggtcctcccgtgtcagggcttcaaatcggagaaaga
gccaaagtcatccccaacacgcaacctcctttaccaaagtatcccgcttcaagcagctgg
gtgtcagaatctgccacagttgcatccactgcacctcctttgtcgaccgctcaaccctct
aactctaacactcattggacgccagttgcatctgttgccccggcatccaatttcaagcca
caaaaatctacacccgtacctcctagctcgcctccgaagagtggaggaaagatgaaaagc
aagtctagaaatcctttgcattactctgcctccagagctaacgaggatgaagtggtggaa
gttccagatttacctaatatagcattgccaattggcaagaagggattgcctagttttaat
ttcggtgaccctcagtcgaagccttcacctgctgtcacgcccttttccctatttggcagt
cctgctaatggtggtccgaagaaacccgcgtcatctctgccaccagcatacggcggtcag
ggcggcaggtctaactttgtggaggacactccggcagctccatcaaagcccaatgctaat
cccacaagtcaggtgaccccaatgatgacctccacaccgttccctgggaatttcacggca
ccccagtttaagttttcaacgccgcaggcaaaacaagaggaggagggcagtggcatcaat
tttaccttttcagagccggccgtgaaaggctcgtcgttcggcaaagattccttaccgaca
aaagcagctgaaggcgaatttacatttagtgctcctagccagaaagtgtcgttgatgggc
agtggcaaggatgcggccggtctcttattttccaagcccgtggagaacgaggaccagaag
gtcgcagaggaggaagaagacgattcatcgggtggcattaaagtcgcgagaagtctcaaa
tctggcagctgcttgcaaatccttggtataggctcttcaaagccagttacgacgtcggca
agtccaaagaagacgcaggatactagtagcgcctcctccgtgtttgataaatttaaaccc
gctgtcggttcttgggagtgcgatacctgcttggtaaggaatggcaaagaatccttaaaa
tgtgtggcatgtcaggctgataaaccaggagcgaaaactacgtcccttgcggaaaaattc
aagcccgccccaggctcatgggagtgtgggacttgcttaataagaaacaatgccggtgtc
gataagtgcatcgcctgcagttcgtccagaccggtttcaagcgagaacaagacgaatgat
gataccacgttatctctcagtgagaagtttaagccacccatagggtcgtgggagtgtgac
acgtgcttggtgcgaaataaagccgaggctacgaactgcgtagcttgttcgtccgaacgg
cccggcggtgtggagaaagcaaactctcaacagggaagtagtaatagtaaatctctcgca
gagatgtttaaacctccagcaggatcttggagttgtgaaacctgcctgattcaaaaccag
gccaaagataccaagtgtgtagcatgccaaagtttgaaaccaggtgcgaaggcatcacag
gaacaatctcagacgaagggattcagtatacaagggacggaatttaaactagctacacct
ctatcatttggatcaaaattaaaagacaatgaaagtactgcgaaagcttccgcttctgtg
aaacctagtttatcggaaatgtttaagcctccagagggctcgtgggaatgcgacacatgt
ttggtgcggaacaaaccagcgtcgtccagatgtgtagcctgtgaaacgccaaagccaggt
tcggaaccagcccttcgtgctcctcctgcgtcgtcttttaagtttggcagcagtacctcg
tcagaaagtgcaacatcaacgcaaggattcaagatagccggaagcataccttcattttta
tcttcagggactactctaggaaacggtggctttaaaattgacagtggtacgacacccaca
gataatggaaacccatctgtaggtttcaaactacccccaggtgtcaactttgggtctata
gggggcacgtccaatcagttatcgggcgcgaccagctcggacgcagtttctagttccggt
ggtttttcgttaggatctgtcagggacaaggacacattaggtgggggactctccttccag
cctcccaaagatctcggagacagttcaaaggtggcggacagctccgctcctttgaacatc
ggctttaaatttggagagagtaacgaagatggcaaaaataagaaaagtactacctttacc
tttggagcatccagcacgacggacgaaacggataaactatcgggtacgggggccgccacg
ctggcggggggtgcgggcatcgttgagaaaaaggaccagacagtggttaaaactgctgca
gatgccacaaaccagagcagtggtctaggttttcaatttggggctaagctcagtgaacct
ttgcagagtagtgtcaaagcaactccaaatgtgaacccattccagagtaacctaacatct
actggctcaaagccagcctttagctttggtgctccagtctcgagtgaatctaagccaagt
gcctcggtggctaacgctgttaatacgaatcagtccagcagctcaagctctcttgacaca
accaacgctctgccgacttttcagtttggatcgactcagaaatcgaatcagccgttgcaa
caagccgtcaggctcggcaagaggaaagaatcagagccttcgtccacttcggtggaaaag
ccagctttcaacttcgccgggtccaatccttcgggaccaccggtcaagttcggaatgccg
tctgcttcgagcggattaccgaagccgggcttgacgtttggagcaagtaagacacccggt
accagcaaccctcagaccaatgcatctcctttccagtttggagcccaacctaagtcagac
cttccccctgcacagacttcttccccttttgcctttggtgctaaacctcaacaatcacaa
gttcctgtctcaaatgcgagtggcttccagtttggaatggtctcttcaagcagtcagaac
tcccagaagccagagaagaagccgtttacttttggagctgtaaccacatcctcccagtca
gcagctggctccttcacagcttccaaaaatttctctgggtttgatagtgctgggactgga
cccactaaatctgctgtgccttcttttggtgggactgcttcaggttttgggtccagtgct
gcacctttgaataactccgccagtgcaagcctgttcgggggtcagcagaattcgacgccc
gttttcggccaaagcaccctacagcagaactcctttggagcaacgactaatgccgtgcca
acgttcggtgccgggactagcggcggtccagcatttggtggacctgtgccagcctttgga
tcaaatagtcaacccaatgctaacaatacaggctttgcagtcgatgcgaaaggcccgacc
ttccagtttggccagaataacaacaacaatccatctacaggtgcattcacctttggagct
aacccaactcccccaccatcggccaatacgaaccagggaggatttaaattcaatgccagc
caagctccaacatttaactttggagctgctgccgcacctccagctagcaattcgacagcc
tttcagtttagtgctgcgccaacgacagaggtgaaccctttcaacgccagtgcccctccc
agtgggcgcaagatcaaaaaggctgtgagaagaactaatagaaaaacgtag
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