Apostichopus japonicus (Japanese sea cucumber): 139974162
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Entry
139974162 CDS
T10891
Name
(RefSeq) fizzy-related protein homolog
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139974162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ajj04121
]
139974162
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
139974162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
Beta-prop_IFT122_1st
Tricorn_2nd
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_IFT80_2nd
WD40_RFWD3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
139974162
NCBI-ProteinID:
XP_071837211
LinkDB
All DBs
Position
2:2992568..3004416
Genome browser
AA seq
489 aa
AA seq
DB search
MDQEFEKRLLRQLNGQSPVGSTVVKTMTPGKAASPCKEQYGDRFIPSRAGSSWHTKFDSP
TKKEDVSSSATKKEREGAETGEDMLAYHCLLQNELLGAEISTVKDPQCEDRRMVSLQKAK
RNLFTYSVKTQRPSLAIGQDQEPYSLSPVGKDSQKLLRSPRKPMRKISKIPFKVLDAPEL
QDDFYLNLVDWSSTNILSVGLGTCVYLWSACTSHVTRLCDLAVDNDSVTSVAWNERGLQV
AVGTHKGLVQIWDASSQKKLVTLEGHSARVGALAWNGDSICSGSRDRMILQRDSRSASPS
SVRSLTGHRQEVCGLKWSPDHQYLASGGNDNKLFVWSHSSNFPIQQYSDHTAAVKAIAWS
PHQHGLLASGGGTADKYIRFWNTLTGQTLNAVDTGSQVCNLAWSKHDNELVSTHGYSQNQ
ILVWKYPSLVQVAKLTGHTFRVLYLAVSPDGEAIVTGAGDETLRFWNVFSKSRSTKETKS
VLNLFNHIR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagaatttgaaaaaaggctcttaaggcagctgaatggacaaagcccagttggt
tctacagttgttaagaccatgacacctggcaaggcagcatctccttgcaaagaacaatac
ggagatcgctttataccaagccgagctggttcctcttggcataccaagtttgattctccc
accaagaaggaagatgtgagcagctcggctacaaagaaggagagagaaggagcagaaaca
ggagaagatatgctggcctatcactgcttactacagaatgaactattaggtgctgaaata
tccaccgtcaaggatccccagtgtgaagacagacgtatggtcagcctacagaaagccaag
cggaatctcttcacctatagtgtgaagacccaacgtccatctctagcaatagggcaagac
caagaaccatattcgttatcaccagtggggaaggacagccaaaaattgttgcggtctcca
cggaagccgatgagaaagatatccaagataccgttcaaagtcctggatgcccccgaactc
caagacgatttttacttgaacctggtcgactggtcgtcgacaaatatactcagcgtcggt
ctgggtacttgtgtgtacctctggagtgcttgtaccagtcatgtgaccagactctgcgac
ctcgctgtcgataacgattcagtcacatccgtagcttggaatgagaggggcctccaagtc
gctgtgggtactcacaaaggcttagtacagatatgggatgccagttcccagaagaagttg
gtcacattggaaggtcactcagccagagtaggcgctctagcttggaacggtgactcaatc
tgctctggaagcagggacagaatgattcttcagagggacagccgtagtgccagcccatcc
tctgtcaggagtctaaccggtcatcggcaagaagtctgcggcttaaaatggtcacccgac
catcaatatctagcatctggtggtaatgacaataagctttttgtctggagccattccagt
aacttcccgatccagcaatattcagatcacacggctgcggtgaaggccattgcctggtct
ccgcaccagcatggcctgctcgcctcggggggtggaacggcggataaatatatccgtttc
tggaacaccctcacagggcagactctgaatgcagtggacactggatcacaagtgtgcaat
ttagcctggtcaaagcatgacaatgaattggtcagtacccatggttactctcagaaccag
atcttagtctggaagtatccatcgttggttcaagtagccaaacttactggacatacattt
agagttctctatttggctgtttccccagatggtgaggccattgttaccggtgccggagat
gagactctcaggttttggaatgtctttagcaaatccagatccacaaaggaaaccaaatca
gttttgaatcttttcaatcatataagatga
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