Apostichopus japonicus (Japanese sea cucumber): 139974513
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Entry
139974513 CDS
T10891
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139974513
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ajj01002
]
139974513
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajj03021
]
139974513
03036 Chromosome and associated proteins [BR:
ajj03036
]
139974513
Peptidases and inhibitors [BR:
ajj01002
]
Metallo peptidases
Family M1
139974513
Transcription machinery [BR:
ajj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139974513
Coactivators
SAGA/TFTC/STAGA complex
139974513
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
139974513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
139974513
NCBI-ProteinID:
XP_071837811
LinkDB
All DBs
Position
9:complement(32531923..32580627)
Genome browser
AA seq
1174 aa
AA seq
DB search
MNRSSKKADKTSFSPRPFKLSHQILCITGLNFAKKSIVGFVELHLLPLKPDLKRIRLNSK
QCRVYRITINDVWEASFIYSDPTLAICQNENKQRNLHFFSDCHQTAVGSVDSDQANGELV
IRIPDAALFIVKDQRMLRVSIEFSVERPQGGLHFVIPDGDGTYAKRGAHMFCCGTENASR
LWFPCVDTYSEPCTWKLEFTVDKAMTAISCGELVDTVYTPDLKKKTFHYMLTVPTAAPNI
ALAVGPFEIFVDPTMPEVTHFCLPGLKSILKHSTAFLHEAFEFYEDTLAATYPYSCYKQV
FVDEAYEDYQSYATMAVLSTNLLHSKYIIDQTFVSRRNMVNALTEQYFGCYISPNSWYDS
WLTKGISKYLCNIFLKKLFGTNEYRYHIHKDLKLVCDYEQTMGGIILNPEPFLDHSSLQT
EKKPSHLYFPSDNPHTISYLYWKLFATKAHYVMRLIEIRIGQELLLKVFNKLLSLATSGS
QQKFMLHSWGNMLISTSGFLKSLSSVSGKDLATFVEQWVTQGGIAQFHGNFHFNRKRNVV
ELALRQDPSRAGINKYVGPLKVTIQELDGSFEHTLQVEENVTKGEITCHSKSRRHKKKKI
PLMNGEEVDMDLNAMDADSPVLWIRVDTAMTLVRQVFFEQPDFQWQYQLRYERDIVAQIE
AIDALEEFPTMGTISAISDIISDSKTFYRVRTRAVNCFAKVANKLMTSFSGHSALIAIFK
KMYGSHSSPDIVKRNNFSNFPSYFLLKEIPKALGKIRNAHSICPRECLNFLLDLIKYCDN
KKNHYSDNYYRASLLDALTNTVTPAVSTVNTSVDNLIPETKLILEEVVRCLNLEKILPTY
QYTVTVSCLKAIRTLQKNGHLPSDSTLFQSYAQYGHFITVREVAMESLVDIVKVENNGDI
LSWLLDLAEQDPVPYMKHKILSLLIENPPFSQREASSPLSTETLVERLWLYMNSGSSHDC
RLRCDVVDLLFKLYGMSRPSCLPKPELGMVVNLKQKKALLNTVQDPPDEPVEVEPIPEEP
LPLEDDAVSETSHEDRKRKASSPLVSPVEAKMARMSDQEETFVDVMVKSEDERPPTPGEN
LSDYGAPPTPGGDSVKEESISSSPVMGLLEDMDSSRDSFPSLSSTAGSASGLGGPSEPQF
SESRTSVSDPDVHKKKKKNKKHKHKVKREPVDVP
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaagttcaaagaaagcagacaaaacttccttttctccgcgaccttttaaattg
agtcaccagattttgtgcatcactggactgaactttgcaaaaaagtcaattgttgggttt
gtggagcttcatcttcttccacttaagccagacctgaagagaataagattgaacagcaag
caatgcagggtatatcgtatcaccatcaacgacgtctgggaggcatcatttatttacagt
gatcctacccttgccatttgccagaatgaaaacaaacagagaaatcttcacttcttttct
gattgtcaccaaactgcagttggttcggttgattccgatcaggctaatggagaactggtc
attagaattcctgatgcagccctctttattgtgaaagatcagcgaatgctcagggttagc
attgaattctctgttgagcgccctcaaggaggacttcattttgttattcctgatggagat
ggaacgtatgcaaagagaggtgcccacatgttctgctgtggcacagagaatgcctctcgc
ctttggtttccgtgcgtggacacctattcagagccttgtacttggaagttagagttcacc
gtagataaagccatgacggccatctcttgcggagagctggtcgatactgtctacacgcct
gacctgaaaaagaaaacattccattacatgctgactgtacccactgcggctccaaacatt
gcattggctgtcggtccgtttgagatctttgttgaccctaccatgccagaggtcacacat
ttctgcttgcctggtctgaaatcgattctcaaacattctacagcttttctgcatgaggct
tttgagttttatgaagatactctggctgcgacctatccatacagctgttacaaacaggta
tttgtggacgaggcttatgaagattatcaatcatatgccaccatggcagtattaagcacc
aacctcttacactccaagtacatcattgatcagacgtttgtatcccgtcgtaatatggtc
aatgccctcacagagcagtactttggttgctacatcagccctaactcatggtacgacagc
tggctgactaaaggcatctccaagtacctctgcaacatcttcctcaagaaattatttgga
actaacgagtaccggtatcatatccacaaggacctgaaacttgtttgtgattatgaacag
acgatgggtggcatcatcttaaatccagaaccattcctggaccactcgtcactccagacg
gagaagaaaccatcacatctttactttccgtctgacaatcctcacaccatctcctatctg
tattggaagctctttgcaaccaaggcacactatgtcatgagactcattgaaattagaatc
ggacaggaacttctcctgaaggttttcaacaaactcttgtcattggccacatctggtagt
caacagaagttcatgttgcattcctggggtaacatgctgatatcaacaagtggttttctg
aaatcactttcgtctgtgtctggtaaagatttagctacctttgtggagcagtgggttact
caaggcgggatagcccagtttcatggaaactttcactttaacaggaaacgaaatgtggtg
gaactggcgctgaggcaggatccaagtcgggctggcatcaataaatatgtaggtccgttg
aaggtgaccatacaagaattagatggatcctttgagcataccctacaggtggaagagaat
gtcacaaaaggagaaatcacctgtcattctaagagcaggaggcacaagaaaaaaaagatt
ccattgatgaatggggaagaggtagatatggacctgaatgctatggatgctgactctcct
gtcctgtggataagggttgatacagctatgacgctggttaggcaggtcttttttgagcaa
cctgacttccagtggcagtaccagctcagatacgagagagatatcgtcgcacaaattgag
gcaattgatgctctagaagagtttccaactatgggtacgatatcagcaatctctgacata
atctcggactcaaagaccttttacagagtccgaaccagagctgtcaattgctttgccaag
gtcgccaacaaattgatgacttctttcagtggtcactcagctctgattgctatcttcaag
aagatgtatggttcccactcctctcctgatattgtaaagaggaataactttagcaacttt
ccttcgtacttcttacttaaggaaatccccaaagctctcggcaagattcgtaacgctcat
tccatctgccccagggagtgtctgaactttctcctggacttgatcaagtattgcgataac
aagaaaaatcattattctgataactactacagagcatcactgttagatgctttaactaat
acggtgacaccagcagtctcaacggtgaataccagcgtggataatctcatcccagagaca
aagctaatcttggaagaagttgttcgctgtctaaacctggagaagatcctaccaacctat
caatacacagtaacggtcagttgtctgaaagcaatacgtactctgcagaagaacggccat
ctgcctagcgactcaacgctcttccaaagctacgcccaatatggccatttcatcaccgtc
agagaagtcgccatggaatccctggtcgacatcgtcaaagttgaaaacaatggagatatt
cttagttggcttctggacctagcagaacaagatcctgtgccttacatgaaacacaagatc
ctatcactcctgattgagaatccaccatttagccaacgagaagcctcctcacccctcagt
accgagactctggtagagaggctgtggttgtacatgaattctggaagctcgcacgactgc
agactgcgctgtgatgttgtagatctcttattcaagctttatggtatgagccgtccgtcc
tgcctccctaaacctgagcttggaatggttgtaaatctaaaacagaagaaggctcttctc
aatacagtacaggatcctccagacgaacctgttgaagtagaaccaattccagaggaacct
ctgcctttagaggacgatgcagtgtccgaaacttctcatgaagatcgtaagaggaaggcc
tcctcgcctctcgtatcaccggtagaggcaaagatggccagaatgagcgatcaggaggag
acctttgtcgatgtaatggtcaagagcgaggacgaaagacctcctacccctggggagaat
ttgtccgattacggagcgccccccacccctggtggtgacagcgtcaaggaagaatccatc
tcgtcgtcaccagtcatgggtttattagaagacatggacagctcaagggatagcttcccc
agtctgtcatccacggctggttctgcgtcgggactgggaggtccgtcagaacctcaattc
tcagagtctcggacctcagtctccgacccagacgtccataagaagaaaaagaagaacaag
aagcacaaacacaaagtgaagagagagcctgtagatgttccctga
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integrated database retrieval system
