Apostichopus japonicus (Japanese sea cucumber): 139974577
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Entry
139974577 CDS
T10891
Name
(RefSeq) transcription factor Sox-11-like
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ajj03000
]
139974577
Transcription factors [BR:
ajj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139974577
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
139974577
NCBI-ProteinID:
XP_071837925
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All DBs
Position
9:5223983..5227895
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AA seq
382 aa
AA seq
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MVPQTQTILDSNGQTMAYSDPDSPSMDSSGSIDPTLLQSTLDISEDICQTNWRGTNGHIK
RPMNAFMVWSQIERRKIMETMPDMHNAEISKQLGKRWKLLNDDQKTPFVEEAERLRQLHM
QNYPDYKYRPRKKVKPAAKSDGGNRNSSGGKPKSKSKSNSKTNRSGASLVQGVQGGRIDK
VPKLKLTIDKKFRESIKASTAIELAASQLTPPAEVPCSPTGSSLDSYPGGEHSLYDEIAP
QNCEYKRHINITNCSVTSIPNNTTTTSMIPTPAYGGSTSPQSFSVPSPELSAQCSPASTV
SSISTSSQSHFPLDDLSFPGGWPSLDNFTLEDLESLESTINGNQANGQANLDLSDYITPE
VSQMIEGDWLDSSLASFVTACN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggtaccacagacgcaaacaattctagacagtaacggtcaaaccatggcgtacagcgac
cctgattcaccatccatggattcttctggtagcatcgatcctactttactccaatctaca
ctggacatctcggaggatatctgccagacaaactggagaggaaccaatggacatataaaa
agaccaatgaacgccttcatggtctggtctcaaatcgaacgcagaaagatcatggaaact
atgcctgacatgcacaacgccgaaatctccaaacaactcggaaaacgatggaaattgctc
aacgatgaccaaaagacaccattcgttgaggaggctgagagacttcgtcagttacacatg
caaaactaccccgactacaagtaccgaccacggaagaaagtcaaaccagctgccaagtca
gacggtggaaaccgcaacagcagcgggggtaagcccaaatccaaaagcaaatcgaattcc
aagacgaaccgctcgggcgccagcctcgtccagggcgttcaaggaggtcgcatcgacaag
gtgcccaagttgaaactcaccatcgacaagaaattccgcgagagtatcaaggcgagtacc
gcaatagagctcgctgccagtcaactcacgccgcctgcggaagtcccatgcagcccgaca
ggttcgagcctggattcttacccaggaggggaacacagtttgtacgacgagattgcgcca
cagaactgtgagtacaaacgacatataaacattactaactgcagtgtcacatccataccg
aataatacaacgaccacttccatgattccgacgcccgcttacggtggttcaacgagtccg
cagagcttctccgtaccttcgccagaactttccgcccaatgttctccagcttccacagtg
tcgtccatatccacaagttcacagagtcattttcctttggatgatctttcgttccctggt
ggctggccctccctggataacttcacattggaagacttagaatcgttggaatccacgata
aatggcaatcaagctaatggacaagctaacctagatctttcggactacattacaccagaa
gttagtcaaatgatcgaaggagattggttagattcaagtctagcgtcgtttgttacggcg
tgtaactag
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