Apostichopus japonicus (Japanese sea cucumber): 139974750
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Entry
139974750 CDS
T10891
Name
(RefSeq) uncharacterized protein isoform X1
KO
K06237
collagen type IV alpha
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04512
ECM-receptor interaction
ajj04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
ajj04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
139974750
Glycosaminoglycan binding proteins [BR:
ajj00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139974750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139974750
NCBI-ProteinID:
XP_071838239
LinkDB
All DBs
Position
10:1961043..2035816
Genome browser
AA seq
1746 aa
AA seq
DB search
MKFREVLTRHVVLSLLIFLFIWITLTNAATCRGCTSSRCICNGTKGERGIRGPPGLPGNP
GPPGKIGPEGLQGYAGFEGDPGSPGITGPKGFRGKSGMPGMPGRPGDHGQPGDNGPPGED
GMPGCNGTKGEAGPEGPPGSSVPGRQGQPGVRGQKGEAGESGETLKGIKGAMGLQGSTGV
PGSPGDSGPTGPAGLPGDPGPPGTQGEKGRTGPPGLQNVAFDGVKGEKGETGSEGQKGES
CEGPIPHDGPGTIEVGPKGEEGPQGVRGVKGDNGTQGPQGQQGDTGDKGGKGMVGPPGRM
GKRGKDGAPGDPGAKGDSGLNGNPGAPGFNGAEGEKGDVGPTGRDGPQGPPGPPGTSDKD
QECPEGPQGREGPPGPTGFQGEKGNRGIKGMQGQPGPRGPQGQTGAPGQTGTGDKGDAGE
DGSPGVDGEKGERGPPGREGPRGNPGAPGTSFEGPKGMDGAPGRDGSPGPEGPVGDKGQK
GIKGIDASVIGMMGPPGPPGPQGDRGFTGLPGQKGEDGVNGNPGPQGEACGDCPIPEPGE
KGEAGPEGRVGPRGLTGARGEFGSDGERGPGGQKGQPGPAGLNGLKGDQGDPGIPGEQGD
TGIVGPPGPIGMQGDKGSRGPKGGIGLSGADGIPGTDCTPEQVLDLKGAQGAPGLRGETG
GSGDPGLPGSKGEAGTGQPGVQGSKGEKGMIGPEGPQGEKGPRGNTVVIENGQQGPKGDE
GAKGSSGLRGEPGPEGPPGARGRDGDMGLQGEKGDIGPAGPEGESIRGMTGAKGAPGVPG
DPGPGGPQGLPGPLGGMGDPGPVGEKGERGLDGLNGEQGRRGNNGAPGREGQRGERGYPG
PPGEAGEDGAYGDPGEKGEPGLDGFVGRDGAKGEPGLSSIGERGERGEKGAQGPTGPRGR
DGPPGADGEPGTASERGDPGDPGVDGQPGREGDRGPRGPRGENGVNGLTGKDGEPGEAGD
PGEPGPPGADGPPGPIGEPGQPGARGAVGQPGTNGQDGEKGEKGDSGFPGADGQPGRAGT
PGFRGEKGDPGIPGEDGLRGAPGAIGLPGLQGLPGQPGVAGKNGDPGDPGIAGDKGEIGP
RGLPGVSGARGEPGPMGAIGPKGVKGEIGVAGMKGNLGPPGPQGADGIRGLIGPRGQPGV
PGLAGSDGVVGEKGDKGDPGDTVSDICAKGADGETGEPGPQGLPGRRGDKGGKGEPGPIG
RTGNDGTPGEPGPDGPPGDVGVPGPRGDQGERGELGEQGNPGERGDVGPPGNEGLPGLNG
EPGADGDNGADGPQGPPGDIGIPGPRGFTGQRGDKGERGFPGEGRPGVPGEPGASGDPGE
PGSPGADGPPGDFGFAGVEGKKGEPGRPGEPGPIPPVVPGPKGDQGPPGEPGEPGVPGLR
GRKGEEGPTGETGADGRPGEIGPPGMDGFPGLTGDKGDKGDIGPPVDINSLRGEPGEIGS
FGLPGPEGPQGEPGVPGPPGEDGRRGTDGARGPPGSNGIDGEPGPPGEQGSPGRDGPRGI
PGEVGDPGPSGIPGSPSPNPGFLIARHSQTTSYPTCPDGTSEVWTGYSFLYMIGNENGFG
QDLGSPGSCLTRFSTMPHMFCNINNVCHVASRNGYSYWLSTPEPMPMSMEPIPSENVEPY
ISKCIVCEIPSRVVAVHSQSVNIPDCPNGWSPLWIGYSFIMQTGAGAQGSGQMLSSPGSC
LEDFRSIPFIECHDDGKCNYYAASYSFWLATIENGDQFDRPDSTTLKAGSLRSRLSRCQV
CMRGEP
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcgagaagttctaacgaggcacgtagtgcttagtttactcatctttcttttc
atttggataacgttgacaaacgctgcgacatgcagaggctgtacttcatcaaggtgtata
tgcaatggaacaaaaggagaaaggggtatacgaggaccaccagggcttcctggaaaccct
ggtccacccggtaaaattggacctgaaggattgcaaggatatgcaggatttgaaggagac
cctggttcaccaggtattacaggaccaaagggcttcagaggtaaaagtggaatgcctggt
atgcctggaaggccgggggaccatggacaaccaggagacaatggcccaccgggcgaagat
ggtatgccaggatgcaatggtacaaagggagaagcaggtccagaaggccctcctggttca
agtgtgcctggacggcagggccagcctggtgtcagaggtcaaaagggtgaggcaggagaa
agcggagaaaccttgaagggaatcaaaggtgccatgggtctacagggatccacaggagtc
ccgggatcacctggtgattcaggcccaactggtccagctggtttgccaggagatccaggt
cctcctggaactcaaggtgagaaaggtagaacaggcccccctggtttgcaaaacgtggct
tttgatggagttaagggtgaaaagggtgagactggatcagagggacagaaaggagaatct
tgcgagggcccgatacctcacgacgggccaggaactatcgaagttggaccgaagggagaa
gagggaccacaaggtgtacgtggtgtgaagggagacaatggcacgcaaggaccacaaggt
caacaaggagatactggtgacaagggtggtaaaggaatggtcggaccaccaggcagaatg
ggtaaaagaggaaaagatggagctcctggagaccctggtgccaagggtgacagtggttta
aatggtaaccctggggcccctggatttaatggagctgagggtgaaaaaggtgatgtggga
cccacaggtagagatggacctcaaggaccgcctggaccacctggaacaagtgacaaagat
caagaatgcccagaaggtccacagggtcgggaaggtccccctgggccaactggttttcag
ggtgagaaaggcaacagaggtatcaagggtatgcagggtcaaccaggtccaagagggccc
caaggacagactggtgccccaggccaaacaggtactggtgacaaaggagacgctggtgaa
gatggttctcccggtgttgatggagagaaaggggaacgaggaccaccaggaagggaaggt
ccaagaggaaatccaggtgcccctggtacctcttttgagggacccaagggtatggatggt
gctcctggtagggatggttctccaggacctgaagggcctgttggtgacaagggtcagaaa
ggtatcaaaggtatagacgctagtgtcattggtatgatggggccaccgggtcctcccgga
cctcagggtgaccgaggcttcactggtttaccaggccagaagggtgaagatggtgtcaat
ggaaatccaggacctcagggcgaagcatgtggagattgtccaattccagaaccaggcgag
aagggagaagcaggccccgaaggaagggtaggcccccgaggtttgactggagcaagggga
gaatttggaagcgatggtgagaggggaccaggtggacagaagggacagcctggaccagct
ggtcttaatgggctaaaaggtgaccagggagatccaggtattccaggagaacaaggagat
actggcatcgtaggtccaccaggacccattggcatgcagggagataagggatcccggggt
ccaaaaggtggaatcggtttgtcaggagctgacggtattcctggaactgactgtacacct
gaacaagtgctagatctcaagggtgctcaaggtgcaccaggtctacgtggcgaaactggt
ggttctggagatcctggactgccgggtagcaagggtgaagcagggacaggacaaccagga
gtacaaggttcaaagggtgaaaagggaatgattggccccgaaggtcctcaaggagagaaa
ggtcccagaggaaatactgtggtgattgagaatggccaacagggacccaaaggagacgaa
ggggccaagggcagtagtggactgcgtggagaaccgggtccggaaggtccacctggtgca
cgcggccgtgatggagacatgggtcttcagggagaaaagggtgacattggtccagcagga
ccggagggtgaaagtattcgagggatgaccggtgctaagggagcgcctggtgtacctggt
gatcccggtcccggtggacctcaaggcctccccggaccattgggtggcatgggggatcct
ggtcctgtaggagaaaagggtgaacgcggtttggatggtctgaatggtgaacaaggtcgt
agaggtaataatggtgcacctggtagggaaggtcagagaggggagagaggttatcctggg
ccaccaggagaagctggcgaagatggcgcctatggtgaccccggtgaaaaaggtgaacct
ggcctcgatggatttgttggacgtgatggagcaaaaggagagccaggattaagttccatt
ggagaaagaggcgagaggggtgaaaaaggagcacaagggcccacaggaccaaggggcaga
gatggacccccaggagcggatggtgagccagggactgcctcagaaagaggagacccaggc
gatcctggagtcgatggtcaaccaggtagagaaggagatagaggacccagggggcccaga
ggtgaaaatggcgtcaatggactcactggaaaagatggtgaacccggtgaagcaggtgat
ccaggtgaaccaggtccaccaggagcggatggtccacctggccctattggagaaccgggt
caaccaggggctagaggagctgttggtcaacctggaacgaatggccaggatggtgaaaag
ggagagaaaggtgatagtggtttccccggtgcagatggacaacccggtcgggcaggcact
cctggctttcggggagaaaaaggagacccaggaataccaggggaggatggattacgaggt
gcacctggggcgatcgggttgcctgggctccaaggtttacctgggcaacctggtgtagca
ggaaagaatggcgatccaggtgatccaggaatcgccggagataagggagagataggccca
cgagggttgcccggcgtatctggcgcacgaggagaacctggtccaatgggagcgattgga
ccaaagggagtgaaaggtgaaattggtgtcgcaggaatgaagggaaacctaggccctccg
ggaccacagggtgcggatggtatccgaggattgattggcccacgtggtcaacctggcgtc
cctggattagcaggaagtgacggagttgtgggtgaaaagggtgataagggagatccaggc
gacacggtcagtgatatctgtgcaaaaggagcagatggggagacgggtgaaccaggacca
caaggtctgcctggacgcagaggtgacaaaggagggaagggtgagccaggcccaataggt
cggacaggaaacgatggtacccctggtgaacctggaccagatggacccccaggggatgta
ggagttcctggaccacgtggagaccaaggagaaaggggagaactaggagaacaaggcaac
ccaggagagagaggtgatgttggtccccccggtaacgaaggacttccaggattaaacggt
gagccaggggcggatggagataatggcgctgatgggcctcaaggacctccaggagacatt
ggtataccaggacccagaggtttcacaggacagagaggagataagggtgaacgtggcttc
cccggtgagggtcgtcctggagttccaggagaacctggtgcatctggagaccctggtgaa
ccaggatccccaggagcagacggcccaccaggtgatttcggtttcgctggagtagaagga
aagaaaggtgaaccagggcgtcctggtgaacctggaccaattccacctgtcgtacctgga
cctaaaggagaccagggtcctcccggagaacctggtgagcctggtgtaccagggctgagg
ggacgcaaaggtgaagaaggtcccactggggaaacaggtgcagatggcagaccgggcgaa
attggtcctcctggtatggatggtttcccaggcctcactggtgacaaaggagataagggt
gacattggtccaccagttgacattaattctctgcgaggagagccgggggaaattggtagc
tttggcttacctggaccagaaggaccccaaggggagcctggcgttcctggcccacctgga
gaagatggacgtaggggtacagatggagcacgaggaccacccggctcaaatggcatagat
ggagaacctggtcctcctggagaacaaggcagtccaggtcgtgatggtccacgaggtata
cctggtgaagtcggtgatccgggaccatcgggtattcctggctcaccttctcctaatcct
ggattcttaatcgcaagacacagccagacaacgtcttaccctacttgtcccgacggtacg
agcgaggtttggaccggttacagcttcctctacatgataggtaacgagaacggatttgga
caagatcttggttcccccggaagctgtttgaccagattcagtaccatgccacacatgttc
tgcaacatcaacaacgtgtgtcacgtggcatcccgcaatgggtattcctactggttgtct
accccagagcccatgcccatgtccatggaacccatcccgagtgagaacgtcgagccgtat
atcagtaaatgtatcgtatgtgaaatcccgtccagagtggtagcggtccacagtcagtct
gttaacattcctgattgtccaaatggctggtctcctctgtggatcggttacagttttatt
atgcaaacgggtgctggtgcccagggctccggacagatgctgtcctccccaggatcatgt
ctggaagacttcaggtccatccccttcatcgaatgccacgacgacggcaaatgcaattac
tatgccgcctcctacagcttctggctggcaaccatcgaaaatggcgatcagttcgaccgg
cccgactcaaccacactgaaggcaggaagcctgagaagcagactcagtaggtgccaagtt
tgtatgcgaggagaaccgtag
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integrated database retrieval system
