Apostichopus japonicus (Japanese sea cucumber): 139974750
Help
Entry
139974750 CDS
T10891
Name
(RefSeq) uncharacterized protein isoform X1
KO
K06237
collagen type IV alpha
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04382
Cornified envelope formation
ajj04512
ECM-receptor interaction
ajj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139974750
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139974750
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139974750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ajj04147
]
139974750
00536 Glycosaminoglycan binding proteins [BR:
ajj00536
]
139974750
Exosome [BR:
ajj04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
139974750
Glycosaminoglycan binding proteins [BR:
ajj00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139974750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
139974750
NCBI-ProteinID:
XP_071838239
LinkDB
All DBs
Position
10:1961043..2035816
Genome browser
AA seq
1746 aa
AA seq
DB search
MKFREVLTRHVVLSLLIFLFIWITLTNAATCRGCTSSRCICNGTKGERGIRGPPGLPGNP
GPPGKIGPEGLQGYAGFEGDPGSPGITGPKGFRGKSGMPGMPGRPGDHGQPGDNGPPGED
GMPGCNGTKGEAGPEGPPGSSVPGRQGQPGVRGQKGEAGESGETLKGIKGAMGLQGSTGV
PGSPGDSGPTGPAGLPGDPGPPGTQGEKGRTGPPGLQNVAFDGVKGEKGETGSEGQKGES
CEGPIPHDGPGTIEVGPKGEEGPQGVRGVKGDNGTQGPQGQQGDTGDKGGKGMVGPPGRM
GKRGKDGAPGDPGAKGDSGLNGNPGAPGFNGAEGEKGDVGPTGRDGPQGPPGPPGTSDKD
QECPEGPQGREGPPGPTGFQGEKGNRGIKGMQGQPGPRGPQGQTGAPGQTGTGDKGDAGE
DGSPGVDGEKGERGPPGREGPRGNPGAPGTSFEGPKGMDGAPGRDGSPGPEGPVGDKGQK
GIKGIDASVIGMMGPPGPPGPQGDRGFTGLPGQKGEDGVNGNPGPQGEACGDCPIPEPGE
KGEAGPEGRVGPRGLTGARGEFGSDGERGPGGQKGQPGPAGLNGLKGDQGDPGIPGEQGD
TGIVGPPGPIGMQGDKGSRGPKGGIGLSGADGIPGTDCTPEQVLDLKGAQGAPGLRGETG
GSGDPGLPGSKGEAGTGQPGVQGSKGEKGMIGPEGPQGEKGPRGNTVVIENGQQGPKGDE
GAKGSSGLRGEPGPEGPPGARGRDGDMGLQGEKGDIGPAGPEGESIRGMTGAKGAPGVPG
DPGPGGPQGLPGPLGGMGDPGPVGEKGERGLDGLNGEQGRRGNNGAPGREGQRGERGYPG
PPGEAGEDGAYGDPGEKGEPGLDGFVGRDGAKGEPGLSSIGERGERGEKGAQGPTGPRGR
DGPPGADGEPGTASERGDPGDPGVDGQPGREGDRGPRGPRGENGVNGLTGKDGEPGEAGD
PGEPGPPGADGPPGPIGEPGQPGARGAVGQPGTNGQDGEKGEKGDSGFPGADGQPGRAGT
PGFRGEKGDPGIPGEDGLRGAPGAIGLPGLQGLPGQPGVAGKNGDPGDPGIAGDKGEIGP
RGLPGVSGARGEPGPMGAIGPKGVKGEIGVAGMKGNLGPPGPQGADGIRGLIGPRGQPGV
PGLAGSDGVVGEKGDKGDPGDTVSDICAKGADGETGEPGPQGLPGRRGDKGGKGEPGPIG
RTGNDGTPGEPGPDGPPGDVGVPGPRGDQGERGELGEQGNPGERGDVGPPGNEGLPGLNG
EPGADGDNGADGPQGPPGDIGIPGPRGFTGQRGDKGERGFPGEGRPGVPGEPGASGDPGE
PGSPGADGPPGDFGFAGVEGKKGEPGRPGEPGPIPPVVPGPKGDQGPPGEPGEPGVPGLR
GRKGEEGPTGETGADGRPGEIGPPGMDGFPGLTGDKGDKGDIGPPVDINSLRGEPGEIGS
FGLPGPEGPQGEPGVPGPPGEDGRRGTDGARGPPGSNGIDGEPGPPGEQGSPGRDGPRGI
PGEVGDPGPSGIPGSPSPNPGFLIARHSQTTSYPTCPDGTSEVWTGYSFLYMIGNENGFG
QDLGSPGSCLTRFSTMPHMFCNINNVCHVASRNGYSYWLSTPEPMPMSMEPIPSENVEPY
ISKCIVCEIPSRVVAVHSQSVNIPDCPNGWSPLWIGYSFIMQTGAGAQGSGQMLSSPGSC
LEDFRSIPFIECHDDGKCNYYAASYSFWLATIENGDQFDRPDSTTLKAGSLRSRLSRCQV
CMRGEP
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcgagaagttctaacgaggcacgtagtgcttagtttactcatctttcttttc
atttggataacgttgacaaacgctgcgacatgcagaggctgtacttcatcaaggtgtata
tgcaatggaacaaaaggagaaaggggtatacgaggaccaccagggcttcctggaaaccct
ggtccacccggtaaaattggacctgaaggattgcaaggatatgcaggatttgaaggagac
cctggttcaccaggtattacaggaccaaagggcttcagaggtaaaagtggaatgcctggt
atgcctggaaggccgggggaccatggacaaccaggagacaatggcccaccgggcgaagat
ggtatgccaggatgcaatggtacaaagggagaagcaggtccagaaggccctcctggttca
agtgtgcctggacggcagggccagcctggtgtcagaggtcaaaagggtgaggcaggagaa
agcggagaaaccttgaagggaatcaaaggtgccatgggtctacagggatccacaggagtc
ccgggatcacctggtgattcaggcccaactggtccagctggtttgccaggagatccaggt
cctcctggaactcaaggtgagaaaggtagaacaggcccccctggtttgcaaaacgtggct
tttgatggagttaagggtgaaaagggtgagactggatcagagggacagaaaggagaatct
tgcgagggcccgatacctcacgacgggccaggaactatcgaagttggaccgaagggagaa
gagggaccacaaggtgtacgtggtgtgaagggagacaatggcacgcaaggaccacaaggt
caacaaggagatactggtgacaagggtggtaaaggaatggtcggaccaccaggcagaatg
ggtaaaagaggaaaagatggagctcctggagaccctggtgccaagggtgacagtggttta
aatggtaaccctggggcccctggatttaatggagctgagggtgaaaaaggtgatgtggga
cccacaggtagagatggacctcaaggaccgcctggaccacctggaacaagtgacaaagat
caagaatgcccagaaggtccacagggtcgggaaggtccccctgggccaactggttttcag
ggtgagaaaggcaacagaggtatcaagggtatgcagggtcaaccaggtccaagagggccc
caaggacagactggtgccccaggccaaacaggtactggtgacaaaggagacgctggtgaa
gatggttctcccggtgttgatggagagaaaggggaacgaggaccaccaggaagggaaggt
ccaagaggaaatccaggtgcccctggtacctcttttgagggacccaagggtatggatggt
gctcctggtagggatggttctccaggacctgaagggcctgttggtgacaagggtcagaaa
ggtatcaaaggtatagacgctagtgtcattggtatgatggggccaccgggtcctcccgga
cctcagggtgaccgaggcttcactggtttaccaggccagaagggtgaagatggtgtcaat
ggaaatccaggacctcagggcgaagcatgtggagattgtccaattccagaaccaggcgag
aagggagaagcaggccccgaaggaagggtaggcccccgaggtttgactggagcaagggga
gaatttggaagcgatggtgagaggggaccaggtggacagaagggacagcctggaccagct
ggtcttaatgggctaaaaggtgaccagggagatccaggtattccaggagaacaaggagat
actggcatcgtaggtccaccaggacccattggcatgcagggagataagggatcccggggt
ccaaaaggtggaatcggtttgtcaggagctgacggtattcctggaactgactgtacacct
gaacaagtgctagatctcaagggtgctcaaggtgcaccaggtctacgtggcgaaactggt
ggttctggagatcctggactgccgggtagcaagggtgaagcagggacaggacaaccagga
gtacaaggttcaaagggtgaaaagggaatgattggccccgaaggtcctcaaggagagaaa
ggtcccagaggaaatactgtggtgattgagaatggccaacagggacccaaaggagacgaa
ggggccaagggcagtagtggactgcgtggagaaccgggtccggaaggtccacctggtgca
cgcggccgtgatggagacatgggtcttcagggagaaaagggtgacattggtccagcagga
ccggagggtgaaagtattcgagggatgaccggtgctaagggagcgcctggtgtacctggt
gatcccggtcccggtggacctcaaggcctccccggaccattgggtggcatgggggatcct
ggtcctgtaggagaaaagggtgaacgcggtttggatggtctgaatggtgaacaaggtcgt
agaggtaataatggtgcacctggtagggaaggtcagagaggggagagaggttatcctggg
ccaccaggagaagctggcgaagatggcgcctatggtgaccccggtgaaaaaggtgaacct
ggcctcgatggatttgttggacgtgatggagcaaaaggagagccaggattaagttccatt
ggagaaagaggcgagaggggtgaaaaaggagcacaagggcccacaggaccaaggggcaga
gatggacccccaggagcggatggtgagccagggactgcctcagaaagaggagacccaggc
gatcctggagtcgatggtcaaccaggtagagaaggagatagaggacccagggggcccaga
ggtgaaaatggcgtcaatggactcactggaaaagatggtgaacccggtgaagcaggtgat
ccaggtgaaccaggtccaccaggagcggatggtccacctggccctattggagaaccgggt
caaccaggggctagaggagctgttggtcaacctggaacgaatggccaggatggtgaaaag
ggagagaaaggtgatagtggtttccccggtgcagatggacaacccggtcgggcaggcact
cctggctttcggggagaaaaaggagacccaggaataccaggggaggatggattacgaggt
gcacctggggcgatcgggttgcctgggctccaaggtttacctgggcaacctggtgtagca
ggaaagaatggcgatccaggtgatccaggaatcgccggagataagggagagataggccca
cgagggttgcccggcgtatctggcgcacgaggagaacctggtccaatgggagcgattgga
ccaaagggagtgaaaggtgaaattggtgtcgcaggaatgaagggaaacctaggccctccg
ggaccacagggtgcggatggtatccgaggattgattggcccacgtggtcaacctggcgtc
cctggattagcaggaagtgacggagttgtgggtgaaaagggtgataagggagatccaggc
gacacggtcagtgatatctgtgcaaaaggagcagatggggagacgggtgaaccaggacca
caaggtctgcctggacgcagaggtgacaaaggagggaagggtgagccaggcccaataggt
cggacaggaaacgatggtacccctggtgaacctggaccagatggacccccaggggatgta
ggagttcctggaccacgtggagaccaaggagaaaggggagaactaggagaacaaggcaac
ccaggagagagaggtgatgttggtccccccggtaacgaaggacttccaggattaaacggt
gagccaggggcggatggagataatggcgctgatgggcctcaaggacctccaggagacatt
ggtataccaggacccagaggtttcacaggacagagaggagataagggtgaacgtggcttc
cccggtgagggtcgtcctggagttccaggagaacctggtgcatctggagaccctggtgaa
ccaggatccccaggagcagacggcccaccaggtgatttcggtttcgctggagtagaagga
aagaaaggtgaaccagggcgtcctggtgaacctggaccaattccacctgtcgtacctgga
cctaaaggagaccagggtcctcccggagaacctggtgagcctggtgtaccagggctgagg
ggacgcaaaggtgaagaaggtcccactggggaaacaggtgcagatggcagaccgggcgaa
attggtcctcctggtatggatggtttcccaggcctcactggtgacaaaggagataagggt
gacattggtccaccagttgacattaattctctgcgaggagagccgggggaaattggtagc
tttggcttacctggaccagaaggaccccaaggggagcctggcgttcctggcccacctgga
gaagatggacgtaggggtacagatggagcacgaggaccacccggctcaaatggcatagat
ggagaacctggtcctcctggagaacaaggcagtccaggtcgtgatggtccacgaggtata
cctggtgaagtcggtgatccgggaccatcgggtattcctggctcaccttctcctaatcct
ggattcttaatcgcaagacacagccagacaacgtcttaccctacttgtcccgacggtacg
agcgaggtttggaccggttacagcttcctctacatgataggtaacgagaacggatttgga
caagatcttggttcccccggaagctgtttgaccagattcagtaccatgccacacatgttc
tgcaacatcaacaacgtgtgtcacgtggcatcccgcaatgggtattcctactggttgtct
accccagagcccatgcccatgtccatggaacccatcccgagtgagaacgtcgagccgtat
atcagtaaatgtatcgtatgtgaaatcccgtccagagtggtagcggtccacagtcagtct
gttaacattcctgattgtccaaatggctggtctcctctgtggatcggttacagttttatt
atgcaaacgggtgctggtgcccagggctccggacagatgctgtcctccccaggatcatgt
ctggaagacttcaggtccatccccttcatcgaatgccacgacgacggcaaatgcaattac
tatgccgcctcctacagcttctggctggcaaccatcgaaaatggcgatcagttcgaccgg
cccgactcaaccacactgaaggcaggaagcctgagaagcagactcagtaggtgccaagtt
tgtatgcgaggagaaccgtag
DBGET
integrated database retrieval system
