Apostichopus japonicus (Japanese sea cucumber): 139974751
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Entry
139974751 CDS
T10891
Name
(RefSeq) uncharacterized protein
KO
K06237
collagen type IV alpha
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04512
ECM-receptor interaction
ajj04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
ajj04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
139974751
Glycosaminoglycan binding proteins [BR:
ajj00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139974751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139974751
NCBI-ProteinID:
XP_071838241
LinkDB
All DBs
Position
10:complement(1881229..1946434)
Genome browser
AA seq
1735 aa
AA seq
DB search
MSSNILKSSIWIWFLTLCIFLVTVNYVNGQEDCDRRCKACACRGRKGDRGPTGFAGRDGP
EGALGGQGPRGLPGSKGDKGVVGIAGLRGEGGEVGFPGTPGFDGTPGINGEPGAAGPQGH
DGFPGCNGSMGDVGPQGETVFGDEGQEGFSGLKGQKGEPARFVQAIRGDMGDTGPEGLPG
SDGNPGPAGREGAKGVRGPRGERGLRGDDGERGPQAPSVTGPKGQRGESGNRGPKGQPYT
IESTQPPDLSNYKGETGMKGVRGPKGYPGAIGPKGGKGIKGVDGMVGEKGLRGEAGERNE
PGRKGETGEKGIQGDNGADGPNGVTGLPGAKGERGDRGADGNIGIQGNPGVLLGGDPGPE
GPRGERGAPGMPGKRGGIGDPGVTGAIGDAGPQGPIGEQGRPGVGRDGEKGKMGMMGMPG
MQGMFGSEGFPGPQGQKGTMGRPGIAIQGLTGMDGPPGRDGSIGRKGPRGQMGDVGEPGK
LPDGSEIVGPAGEKGRQGFPGERGRIGQSGSPGVVGEKGKHGGECPLCLGNPKGYPGDFG
FPGIRGPKGLIGPKGYKGRSGQPGPYGVVGEVGATGKDGEKGETGYAGAKGSIGREGRQG
RSGEPGPRGITGDQGDPGDAGVPGQSGKLGSLPDGRKNGGVGDNGPPGLPGPKGVQGSVG
PAGPPGEGITGEPGLTGVQGDPGSVGPRGKPGEVGDPAEVPDVTEPIPGEEGEPGEFGDP
GPKGFMGFEGPPGEQGTVGTQGFKGERGDVGNPGLPTVGSKGFTGPRGDKGPFGPAGEEG
PRGLAGSFGIDGFPGNPGDNGDPGKDGEPGEAGPDGLPGPPGARGPQGFNGSTGRQGRSG
RAGFQGFKGARGELGRNGAQGAPGERGEDGVGIPGVKGSSGYVGDPGLEGEDGNFGVKGR
PGLPSAKGEKGFAGFQGLDGLPGLQGPEGPPGKPGRPGRDGQPGLSGLPGQPGEPGFPGL
IGRQGPEGAPGPDGDQGEPGLAGLPGYDGYPGRRGDYGEPGERGLDGPDGIPGEPGARGM
VGSQGLPGITGEDGGIGAPGVDGAPGPDGVPGLPGLPGFAGLKGFRGPAGDAGEDGEEGR
KGLIGPKGIMGFAGLRGVPGDAGLIGFPGDKGFPGLNGLTGQVGFPGPDGDSGDPGASGR
PGRKGARGEKGTPTTVPQRVGQGGNKGQPGGFGPPGLLGPRGETGDFGEAGLPGLDGLDG
QDGLPGRPGQQGPPGPVGLPGFFGFKGLEGFPGIKGRRGRQGRDGPQGVVGQPGVPGRPG
FGGFIGEKGERGPAGFRGEEGAKGYPGLPGDTGEIGFGDPGEDGESGVAGRPGFDGFDGR
KGRRGPTGPDGIQGERGEPGIAGPPGTTPFYIKGERGEVGPKGPDGFRGLQGPDGEDGSP
GLTGENGRNGNPGISGFPGSDGRKGDKGDKGDGGEPFTTQRGAKGVKGFPGIGGFTGDPG
KMGEPGAPGRSGFDGLPGRPGRRGPFGLPGRSGGPGITGAPGFIGEAGPQGFKGREGREG
FPGIDGSGSLQGHLVVTHSQSTRIPTCPSNTNLLWEGYSLLFTEGDSYTHHQELGNAGSC
LPRFSTMPFIFCNQNKVCNYASRNDKSYWLATNRALPMMPVSGRDILPFISRCSVCETRS
TVVALHSQDVSVPFCPRNWDTLWEGYSFAMYTAAGADGGGSNLHSPGSCLRHFRTAPFIE
CDGIGQCMFFSNSFSFWLTRVEQGDQFSRPEQRTLKAGDLLSNVSRCKVCQKRVR
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaacatcttgaaaagctctatatggatctggttcctaactctttgtatattc
ttagtaacggtgaactatgtgaatggtcaggaagattgcgaccgcagatgcaaggcttgt
gcttgtagaggaaggaaaggagacaggggacccacaggttttgcagggcgtgatggtcca
gaaggggcacttggaggacaaggtccacgtggtcttccagggagtaagggagacaaaggt
gttgttggaattgctggtcttcgaggagaaggtggggaagtgggtttccctggaactcca
ggatttgatggcacgcctggaataaatggtgaaccaggggcagctggtccacagggtcac
gatggtttcccaggatgcaatggatctatgggcgatgttggtcctcaaggtgaaacagta
ttcggtgatgaaggacaagaggggttctctggattgaagggtcagaagggagagccagca
cgctttgtgcaagctatcagaggagacatgggagatacgggaccagaagggttacctggt
tctgatggcaatccaggaccagctggaagggaaggtgccaagggtgtcagaggacctaga
ggtgaaaggggtcttagaggtgatgatggtgagaggggaccacaggcaccttctgttact
ggaccaaaaggtcaaaggggtgaaagtggtaatagaggtccaaaaggccaaccatacacc
attgaatccacacagccgccagacctgagcaattacaaaggagaaactggcatgaaggga
gttagaggccctaaaggttatcctggagctataggacccaagggtggaaagggtatcaag
ggtgttgacggtatggtcggtgagaaaggtctccgtggagaggctggtgaaaggaacgaa
ccaggaagaaaaggagaaaccggagaaaaaggaatccaaggagacaacggtgccgatgga
ccaaatggagtcacaggtctgccaggggcaaagggagaacgaggagacaggggagcagat
ggaaatattggtatccaaggtaaccccggtgttcttttgggtggagaccctggaccagag
ggtcctcgtggtgaacgaggtgccccaggcatgcctggcaaacgtggtgggataggtgat
cctggcgtaacaggtgccattggtgatgctggaccacagggtcccatcggtgaacaagga
agaccgggtgtcggtagagatggggagaaaggcaaaatgggaatgatgggtatgcctggc
atgcaagggatgtttggctcagagggctttcctggtccacaaggtcagaagggcacaatg
ggtcgtcctgggatcgctattcagggccttacaggaatggatggcccacctggtagagat
ggaagtattggaaggaagggcccaagaggtcaaatgggggatgtaggtgaacctggaaaa
ctgccagacggttctgaaattgttggtcctgccggagagaagggcagacagggattccca
ggagagagagggcgcataggacagagtgggtcacctggtgtggtcggagaaaaaggtaaa
catggtggagaatgtccactttgtttaggaaatccaaagggttatccaggagattttggt
tttcctggcatcagaggtccaaagggactaattggtcccaaaggttataagggaagatct
ggacaaccagggccctatggagtcgttggtgaagttggagcaactggtaaagatggtgaa
aagggagaaactggatatgctggtgccaagggatctataggtagagagggccgtcaaggc
cgttcaggtgaacctggcccgagaggaattacaggggatcaaggtgaccctggtgatgcc
ggtgtcccgggccaatccggtaaattaggtagtttgccagatggaaggaaaaatggaggc
gtgggtgataatggtcctcctggtttacctgggccaaaaggtgttcaaggcagtgtaggt
ccagctggtccacctggggaaggcattactggcgagccaggtctcactggtgtacaggga
gatcctggctcagtcggcccacgtggaaagcctggagaagttggagatccagctgaggtc
ccagatgtaactgaaccaataccaggagaagagggtgaacctggggaatttggcgaccca
ggacccaaaggtttcatggggtttgaaggtccacccggagaacagggtacagtagggact
cagggattcaaaggagaacgaggtgatgtaggtaacccaggtctgccaactgtcggcagt
aaaggtttcactggcccaagaggtgacaagggcccatttggccctgcaggagaggaaggc
ccacgaggattagcaggcagttttggaattgatgggtttccaggcaatcctggagataat
ggtgacccaggcaaagacggtgaaccaggagaggctggtcctgatggattgccaggccca
ccaggggcaagaggacctcaaggattcaatgggtccacgggtcgtcaaggacgttctggt
cgtgcaggtttccaaggattcaaaggagcaaggggtgaacttggtagaaatggtgctcaa
ggagcccctggagagagaggagaggacggtgttggaatccctggtgtcaagggttcgagc
ggatatgttggtgaccctggcttagaaggggaagatggtaatttcggggtgaaaggtcgt
ccaggactcccaagtgcaaagggtgagaaaggttttgctggtttccaaggtctggatgga
ctccctggtttgcaaggcccagaaggccctcctggtaaaccaggaagaccaggaagagat
ggccagcccggattatcaggtctgcctggtcaacctggtgagccaggttttccggggctc
attggaaggcaaggccctgaaggagcaccagggcctgatggtgaccaaggtgaaccaggc
ttagctggcctgcctggatatgacggctaccctggtagaagaggtgactatggtgaaccc
ggggaacgtgggctggatggtccagatggtatccctggggaaccaggggcacgtgggatg
gttggatcacaaggtcttccaggaattaccggagaggatggaggaattggggcaccggga
gtggatggggcaccaggccctgatggagtcccaggcctacctggactacctggctttgca
ggattgaaaggcttccggggtccggctggggacgcaggagaggatggagaggaaggaaga
aaggggctcatcggtcccaagggtatcatgggtttcgctggcctcaggggtgttccggga
gatgctggacttattggttttccaggagacaaaggattcccaggattaaatggtcttaca
ggtcaagttgggtttccagggcctgacggtgatagtggagatcctggtgcctcaggaaga
ccaggccgcaagggagccaggggagagaagggaacgccaaccactgtgccacaaagggtc
ggtcaaggcggaaataaaggtcaaccgggtggatttggacccccaggactcctaggtccc
agaggagagactggagactttggagaggcgggccttccaggtcttgatggattagatggt
caggatggattaccaggaagacctggtcagcagggtccacccgggccggtaggcttgccc
ggtttttttggtttcaaaggattggaaggttttcctggaatcaaaggaagaaggggtaga
caaggaagagatggaccccaaggtgttgttggtcaaccaggtgtccctggaagacctggt
tttggtggtttcataggagagaagggagagcgaggccctgctggatttagaggtgaggaa
ggtgctaagggttaccctgggctgcctggagatactggagagattggatttggagatcca
ggagaagatggtgaaagtggagtcgctggccgtcctggatttgatggctttgatggtaga
aagggaagacgaggtccaactggacctgatggtatccaaggagagaggggtgagcctggt
atcgccggtccacctggaacgacaccgttttacatcaaaggagagcgtggagaagttggt
cccaagggccctgatggtttccgagggttacaaggtcccgatggggaagatggttcgcca
ggactgactggtgaaaatggaagaaatggaaatccaggaatatctggtttcccaggaagc
gatggtcgtaaaggagacaagggtgacaaaggagatggtggggaacctttcaccacccag
agaggagcgaaaggtgtcaaaggtttccctggaataggtggattcacaggagatcctgga
aaaatgggggaaccaggggcacccggcagaagtggttttgatggattaccaggacgacca
ggaagacgaggtccatttggtttacctgggcgatctggggggcctggtataaccggtgct
cctggattcattggtgaagcaggacctcaaggattcaagggccgtgagggacgcgaaggt
ttccctggtattgatggtagcggctcgctgcaaggtcacttggtggtcacccacagtcaa
agcaccagaataccgacttgtccaagtaatactaacctactatgggagggttacagttta
ctgttcacagagggcgacagttacactcaccaccaagaattaggtaatgctggttcctgt
ctgccacgttttagtactatgcctttcatcttctgtaaccaaaacaaggtctgtaattat
gccagccgaaatgacaagtcctactggcttgcgacgaatcgtgccttgcctatgatgcca
gtgagcggtcgggacattttacctttcatcagtcgttgctccgtctgtgagactcgttcg
actgtcgtggctctccatagtcaagacgtctcggttcctttctgcccgagaaattgggat
acactttgggaaggatacagctttgcaatgtacactgcagccggggcagacggaggaggc
tcgaaccttcacagtcctggctcctgtctacgccacttccgtaccgcaccgttcatcgag
tgtgacggcatcggccagtgcatgttcttctccaacagtttcagtttctggctgaccaga
gtggagcagggtgaccagttctctcgtccggagcagaggacgctaaaggccggagatctt
ctcagtaacgtcagcaggtgtaaggtgtgccagaagagagtacgatag
DBGET
integrated database retrieval system
