Apostichopus japonicus (Japanese sea cucumber): 139974804
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Entry
139974804 CDS
T10891
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
Membrane trafficking [BR:
ajj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
139974804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139974804
NCBI-ProteinID:
XP_071838341
LinkDB
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Position
2:complement(3941802..3988765)
Genome browser
AA seq
1443 aa
AA seq
DB search
MYFPVGWPKVLNLPLEVNEPIQQVIASGDRRLFAVITVQSIHIWQCKPCVLIASYRRSAD
SCVVLGLNSSGVWKSDSSVIALATTGGHLLLFRIYQVDSERMYASTTNSAHYYRRDTTEA
DTIPVPQLRIAFSCSVSISAGVVCLCCLKDDILVASSSGILHRVTWAGTHKEMLDISIRA
VPFSLDLEHSRESQLDDPLIHCVDLEYSQTLGLCAAVLSDGRAAVLTTESAKFLPKNVRA
VWASDVKHAKCVAVNSNYRLVAFGLENGQGIVYTVDEVTGALLVSHRLTLSTSDFPEGCR
GAGPVTGLRWTPDSSALVLSWQNGGFSLWSVFGALLLCTLGSDFRTSFFGKPTEALYIRS
MEWGPEGYNLWLTTEPKASLTNNQSEDTNQDTTGQLLQLPFVKSALTTNPVLTNHEHLFL
QGGDRLYLNSGDALVKCSAQDEADGKSPVRHHVTPSSLCSFGDNNSTLMGSKHWSIIQIP
HSYLTNNWPLKFSVVDKSGHCIAVAGQYGFAHCALFTKRWKLFGNITQEKDMSVTGGLAW
WRDFIVCACYNHYEHREEIRLYPRVTNLDNAFAFILKVPFPVLLLNVFKDYLITFCSDCH
ISIFKMERRDSAASEYLDSLACLTGVFNASSYPNGSGDSRSGVKGHVDTAPVASLVRIQG
LSLVNFVPSASCMVSLMLTSLRSETAKPSEGKQIKDVESLVINTAGRILMLQRDRPNTGN
HQLDRRKNHSEMSFCAPVVLASAVECMWATAKSSKDKPHLMEALWLGCGASGMKVWLPLF
PQEGENQHHSFLSKRIMLPFQIRIYPLAVLFEDAVVLGSATDTIHLDAILTPGFESSSNS
CTFLPFTTLERTTQVYLHHILRQLLRRNLGIHALQIASSCTSLPYFPHVLELMLHEVLEE
EATASEPIPDALLPRVIAFIQEFPEYLETVVHCARKTEIALWGYLFASVGSPQQLFEQCL
SSGSLHTAASYLIIIQNLETVRVSRHHATLLLDAALENCEWQLCRDILRFLRSIGPGDVD
PVRTPPPVPNPNYYYPVSPHPNPNKPVDKPDGPKPKRPSVKQAMSIPEEDEQTADEYYMD
IILKRHARKLFSNQRIRDLGMFAAHVDFKLTEWLRKESIRVGKVEDFVTAIKKLHEDFSW
PYPELGDVPLAKTSLKNMNFGVLSINTSFDTHVNGETLINHPEMNPETVDGKTYPSRPSN
LRLERPQSLLSVLSSEDAKSQEVALHQLSTKGSDDTPSFGTMEPSESSSTFDGDVETLLD
DSFWNNSIGVAELQQFYIEVSKTGPPQSESELRHLLQIMIDSGCLEWALLISIVLRDLGS
ISRVVNTVSFTKVPLEVMGRMREGLSFLELWADSECPGYKPLMLAAKPQTRVLTDVVETT
TSPPSPRPCSSASSDHSVGHHEMKRYASHSSSQIGELINGEDDVFGKDDEAAEEVEDSQC
RIS
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgtactttcctgttggatggccaaaggtattaaacctaccacttgaagtcaatgaaccc
attcaacaagtcatcgcaagtggagatcgcaggctatttgcagtcataactgtgcaaagc
attcatatctggcagtgtaagccttgcgtattgattgcaagttacagacgatcggcagat
tcttgtgtagtccttggactcaattcatcaggagtatggaagtcagattcaagtgtaatt
gctttagctacaacaggtggccatctgctattgtttcgaatttatcaagtggactcagag
cggatgtacgcttctacgacaaatagtgctcattactatagacgtgatacgacagaggct
gataccataccagtacctcaactcaggatagctttctcatgcagtgtatccatatcagct
ggtgttgtatgcctctgctgcttaaaggatgatatcctggtggcttcatcctctggtata
cttcacagggtaacatgggctggcacccacaaagaaatgctggatatatccatcagggct
gttccattttcattggatttagaacattcaagagaatctcaacttgacgatcccttgatt
cactgtgtagatttagaatatagtcagaccttaggtttatgtgcagccgtgttatcagat
ggaagagctgccgtcctgaccaccgaaagtgcaaaattcctgccaaagaatgttcgtgct
gtgtgggcatcggatgtgaagcatgctaaatgtgttgccgtaaattctaattatagactc
gtcgcatttggcttagaaaacggccagggtattgtatataccgtcgatgaggtcacaggc
gccctccttgtctcgcatcgcctcacattgtcaactagtgattttccagaggggtgtaga
ggtgctggtcctgtgacaggtctcaggtggaccccagacagtagcgcattagtactctct
tggcaaaatggaggcttctcactttggagtgtttttggtgctttattattatgcactctc
ggcagtgacttccggacctcatttttcgggaaaccaacagaagctttatatatcagaagt
atggaatggggacccgaggggtacaatttatggctcaccactgagcccaaagcaagtttg
acgaataaccagagtgaggatactaaccaagacacgaccgggcaactgttgcaactgccc
tttgtgaagagcgccctcactacaaacccagtcttaaccaatcatgaacatttatttctc
caaggaggggataggttgtacctcaattcgggagacgccctcgtcaaatgcagcgcacag
gatgaagcagacggtaaaagcccagtcaggcaccacgtcaccccgagctcgctctgttca
tttggagataataattctaccttgatgggaagcaaacattggtcaatcatacaaatacca
cacagttatctgaccaataattggcccttgaagttctctgtcgtggacaagtcaggccac
tgtatagcggtagcaggtcagtatggattcgctcactgtgccttgtttacgaagagatgg
aagctctttggtaacatcacccaagagaaggacatgtctgtgacgggaggactagcctgg
tggagggatttcatcgtctgcgcttgttataaccactacgagcacagggaagagataagg
ttgtaccccagggtgacgaatctagacaacgcctttgctttcattctcaaagtacccttc
cccgtgcttttactcaacgtgttcaaggactacctcatcaccttctgttcagactgtcac
atatccattttcaagatggagaggcgggactcggccgcaagtgagtacctggacagtttg
gcatgcctgactggggttttcaatgcaagctcttaccctaacggcagtggcgacagccgc
agtggggtcaagggtcatgttgatacagctccagtagctagcttagtgaggattcagggg
ttatctctggtcaactttgttcccagtgcaagctgtatggtctcattgatgcttacctct
ctcagatcagaaacagccaaaccatcagaggggaagcaaataaaagatgtcgagagttta
gtcatcaatactgcagggagaatactaatgctacagagagatagaccaaacacagggaat
catcaactagataggaggaaaaatcactcagagatgtcattctgtgctccggtggtcctg
gcatcggctgtcgaatgtatgtgggctacggccaagtctagcaaagacaaacctcatctc
atggaagccctctggttgggttgtggtgctagtggtatgaaggtctggttaccgctgttt
cctcaagagggagagaatcaacaccacagctttttgtcaaagagaattatgttgccattc
caaatcagaatctatccattagctgtcttgtttgaagatgcagtggttttggggtcggcc
acagacaccattcacctagatgccatcttaactccaggctttgagtccagtagtaattca
tgcacattcttgccgtttacaactttagaaagaacaacacaagtttatttgcatcacatt
ctccgtcagctgttaagaagaaatttgggtattcatgccctccagattgccagtagttgt
acgtctctgccttattttcctcacgtcttggagctgatgctgcatgaggttttggaggag
gaggccacagcatcagaacctataccagatgccctcttgcccagggtaattgctttcatc
caagaatttccagaatatcttgaaactgtcgtccattgtgccagaaagactgaaatagct
ctctgggggtacctctttgcctcggttggcagtcctcaacaactctttgagcaatgtctg
tcgagtggttctctccacacagcggcctcttatctcatcatcatacaaaacttggagacg
gtcagggttagcagacatcatgccactctactgttggatgccgccttggagaattgcgag
tggcagttgtgtcgagatatcttgagattcctgcgatccatcgggccgggggacgttgat
ccagtgagaactccgccgcccgtacccaaccccaactattactaccccgtctcgcctcat
ccaaatcctaacaaacctgtcgacaaacccgatggacctaaacccaaaaggcctagcgtg
aagcaggccatgtccatccccgaagaagatgaacaaacggcggacgagtattacatggac
ataatcttgaagagacacgcacggaaactcttctctaaccaaagaatcagggacttgggc
atgtttgctgctcatgttgacttcaaactgacagagtggcttaggaaagagagtatcaga
gtgggtaaagttgaagattttgtgaccgcaatcaagaaactccatgaagacttttcgtgg
ccgtatcctgagctcggagatgtcccactggcgaaaacatcactgaagaatatgaatttt
ggcgttttatccatcaacacctcttttgacacgcatgtgaatggagagacactgataaat
cacccggaaatgaacccggagacggtagacggtaaaacctacccgtcgagaccatccaac
ttgaggctagagcgccctcagagccttctctcagtcctctccagcgaagatgctaaatca
caagaggtggcccttcaccagttatccactaaaggctcagatgacacacccagttttgga
acgatggaaccctctgagagcagctcgacttttgacggtgacgtggagactcttttagac
gacagtttctggaataatagcatcggtgtcgcagaactccaacagttttatatagaggtc
tccaagacgggtccacctcagtcagaaagcgaattgagacatttgctgcagataatgata
gattcaggatgcttggaatgggctctactcatctccattgtgctcagagacttgggttct
atatccagggtggtcaataccgtcagcttcacaaaggtacccctggaagtcatgggacga
atgagggagggtctctcattcctggagctgtgggccgactcggaatgtcctggctacaaa
ccactgatgcttgccgcaaaaccacagaccagagtcttgactgacgttgttgagacaacc
acgtccccgccatctccgagaccctgctcgtccgccagttcggaccactcggtgggtcac
cacgagatgaagcgttatgcatcgcacagcagcagtcagatcggtgaactgatcaacgga
gaggacgacgtgtttggcaaagatgacgaagcagcggaggaggtggaagacagtcaatgc
agaatctcctga
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