KEGG   Apostichopus japonicus (Japanese sea cucumber): 139974909
Entry
139974909         CDS       T10891                                 
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:ajj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ajj04121]
    139974909
   03400 DNA repair and recombination proteins [BR:ajj03400]
    139974909
Enzymes [BR:ajj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139974909
Ubiquitin system [BR:ajj04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    139974909
DNA repair and recombination proteins [BR:ajj03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    139974909
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C DEAD zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_2 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_UBOX zf-ANAPC11 zf-rbx1 Prok-RING_4 zf-RING_5 AAA_34 zf-Nse CDC45
Other DBs
NCBI-GeneID: 139974909
NCBI-ProteinID: XP_071838558
LinkDB
Position
10:complement(3576409..3596434)
AA seq 1104 aa
MPRKKDIGRKNGWHAGSFRDDLGSPQGVQHILDSIRSPGGLNSSFTESGLDVNDFCADDQ
QLLGHVRGSIVGLQYYHGEVNEKEMVALIRQPDNAHDANAIKVENTWGEQVGHIKRELAK
PLANICDNRLARIEGVVPYGNRNSFRMPVDISFWAPLENLEAIKAKLSRHGFYLKDSACA
PAGGPSGGRMSAPLYQPKSVLGASVKLSQAEMKNQLDKLFEDIKSEDKTGIKEPSAAVTS
RLYPHQKQALHWMSLRENSKELPPFWEKRGLNFLNTLTNFSSFKRPSSVQGGILADDMGL
GKTLAVISLILSNHLDERPMFEAVGKSSTIQAFPSSRPPSTDFHQANIPKLPSLPKMDDT
LSIPSSSQSLTIDSQGKMLVNTIKRPLTVSKGRWGQTVTQKVQSTGGAGNGGGAEETIII
DDDGEEKATSKKMEVQPGNCSKDDSIIVIDDDSDESWTPAKLKSVRDDVTELATSSSQRG
SKRPQRSTRKNTKYIVIDDSDDNWTPEKKPKKSAKGETRKGAMKKSVPKQQSKRGKSGTS
STKKAEVTEKSPNRPSFQRRLAVTAGRPSSTLIICPVSVLGNWMDQLEEHVDPNIGLKVH
LFHGQSRASSAEKLAGEDVVISTYNTLAHEFKAKGAKSTLHNVHWLRVVLDEAHIIRNPL
AMQTKAILELKSERQWALSGTPIQNNIKDLWSLMSFLKLEPFKTNRTWWQRIIERPIRSG
DQDALRRVQKLMEVLAIRRTKTMKVDGKLLVELPPKTVLLQYVKLSEDERTMYDSMAKDG
KLSVNKFFTTGKFLDHYGDILAILLRLRQLCCHPGLCASAATKLATKGSASCSDEEKKRL
VAALVAVLSQGSDEECCVCLDSLMQPVITQCAHVFCFHCIVEVISQNKKSAACPLCRGAI
SESGLVHVPPEKQSDAPEKDEASEWHSSAKVDALMQCLLLERSKDPSIKSLVVSQFTSFL
TLLQRPLREKGFSFVRLDGSMTASKRADAMSHFASSTDGSPTVLLLSLKAGGVGINLTAA
SKVFLMEPAWNPAVEEQCFDRCHRLGQTKEVTVTKFIVQDSIEERMLQLQEKKRKLMSEA
FGVKAKAEQRQQARIDDVRILLGM
NT seq 3315 nt   +upstreamnt  +downstreamnt
atgccacgtaagaaagatatcggtcgaaagaatggatggcatgctggctcatttcgtgat
gatcttggatctcctcaaggtgtccaacatatcctggattcaatcagaagtcctggaggc
ctgaacagcagcttcactgaaagtggtttggatgtgaacgatttctgcgcagatgatcaa
caactgttgggtcacgtccggggcagtatcgtgggcttacagtactatcatggagaagtg
aatgagaaagaaatggtggcgctaattcgtcagcctgacaacgctcatgatgccaatgcc
atcaaagtggaaaatacttggggtgaacaggtgggacacatcaagagagaacttgccaag
cctctcgccaatatctgtgataacagattggccaggatagaaggagttgtgccctacgga
aatagaaattcgttccgtatgcctgtcgacatatctttctgggctcctctggaaaatctt
gaagctatcaaggcaaaactcagtcgtcatggcttctatctgaaggattctgcatgtgct
cccgctggaggcccctctggcggtcgcatgagcgcccctttgtaccagcccaagagtgtg
cttggtgcctcggtgaaactctctcaggctgagatgaaaaaccagctggacaagttgttt
gaggacattaagagtgaagacaagacgggtatcaaagaacctagtgccgctgtcacaagc
cgcctgtatcctcatcagaagcaagccctgcattggatgtctctccgagaaaactcaaag
gagctgcctcctttctgggagaagagaggtcttaattttcttaacaccctgacaaacttc
tctagtttcaagagacctagcagtgtccaaggtggtatcttagcggacgacatgggattg
ggcaagacgctggcagtaatatcgctcatcctttccaatcacctggacgaaaggccaatg
ttcgaagcggtggggaagtcatccaccattcaggcttttccctcttctcgcccgccttcc
accgacttccaccaagctaatattccaaagttaccttcgttaccaaagatggacgatact
ctctctattccatcctcgtcacaatctctgaccatcgatagccaaggaaaaatgctggtg
aataccatcaagcgacctctcacagtctccaaagggagatggggacaaaccgtcacccag
aaggtgcagtcgacagggggtgctggtaatgggggtggagcagaggagaccatcatcatt
gatgatgatggggaagagaaggccacttcaaagaagatggaggttcaaccaggaaactgt
tctaaagatgatagcattattgtaatcgacgacgatagcgacgaatcttggacacctgct
aagttgaaatcagttcgagatgatgtcacagaacttgcaacttcttcttctcaaagagga
tctaaacgaccacagaggagcaccagaaaaaacaccaagtacattgtcatcgatgatagc
gatgataactggacacccgaaaagaagccaaagaaatcagcgaaaggagaaacaaggaaa
ggagcaatgaaaaaatccgtcccaaagcagcaaagcaagaggggtaaatcggggacgtcg
tcaacgaagaaggcagaggtaacagagaaaagtccaaaccgtccaagttttcagagaaga
ttggctgtcacggctggtcggccttcttcaactctgattatctgtccagtctcggtgctg
ggtaactggatggatcagctcgaggaacacgtggatcctaacatcggccttaaggtccat
ctctttcatggccagagtcgagcgtccagtgccgagaagcttgcaggagaggacgtggtc
atttccacatataatacactggctcacgaattcaaagctaaaggggctaagagtacatta
cacaacgtccactggttgagagtggtactggacgaagctcacatcatccgtaatccgtta
gctatgcagaccaaagctatattggaactcaagtctgaaagacaatgggctttgtcaggt
actccgattcagaataacatcaaggatctttggtcattgatgtcgttcttaaagttagaa
ccattcaagactaaccggacgtggtggcagagaatcatcgagagacccatcaggtccggc
gatcaggatgccctcaggagagtgcagaagctaatggaggtccttgcgatccgacgaacc
aagacaatgaaagttgatggtaagctgctggtagagctgcctcccaagacggtcctctta
cagtacgtcaaactctcagaggacgagagaaccatgtacgacagcatggccaaagatggg
aaactctctgtcaataagtttttcaccaccggtaaatttctggaccactacggcgacatt
cttgccattctgttacgcctgaggcaactctgctgccatcctggactatgtgcctcagct
gccaccaaacttgccaccaagggttccgcctcctgtagtgatgaggagaagaaacgactg
gtagctgcactagttgctgtcctcagccagggctcagatgaggaatgctgcgtttgtttg
gattctctcatgcaaccagtgatcacacaatgcgctcatgtattctgtttccattgtatt
gtggaagtcatctcacagaacaagaaaagtgccgcctgccctctatgtcgtggcgctatc
agtgagtctggtttggtccacgtacctcccgaaaaacagagcgacgcaccggaaaaagac
gaagccagtgaatggcattccagtgcaaaggttgatgctctgatgcagtgtcttctccta
gagagatccaaggatccgtccatcaagagtcttgtcgtctcccagtttacatcctttttg
accttactccaaagacctcttagggagaagggctttagctttgttcgtcttgatggtagc
atgacagcatcgaaaagggctgatgccatgagtcactttgcatcaagtactgatggctcc
cctactgtgcttctattgtccttgaaggctggtggtgtcggtatcaatctcacagctgca
agcaaggtcttcttaatggaacctgcttggaatcctgccgtagaggagcagtgtttcgac
cgttgccaccgacttgggcagacaaaggaggtcaccgttacaaagttcatagtccaggat
tcgatcgaagagcgcatgctgcaactccaggagaagaagagaaagctgatgtccgaggcg
ttcggagtcaaagcaaaggccgaacagagacagcaagctagaatcgacgatgtcaggatc
ttactcgggatgtaa

DBGET integrated database retrieval system